RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 GH1P01241 217 aa15.01□□□□□ -0.01
TCOF1-209ENST00000506630 CD4P01730 458 aa15.01□□□□□ -0.01
TCOF1-209ENST00000506630 MRPS9P82933 396 aaKnown RBP15.01□□□□□ -0.01
TCOF1-209ENST00000506630 GNPTABQ3T906 1256 aa15.01□□□□□ -0.01
TCOF1-209ENST00000506630 BRDTQ58F21 947 aaPredicted RBP15.01□□□□□ -0.01
TCOF1-209ENST00000506630 PCNX4Q63HM2 1172 aa15.01□□□□□ -0.01
TCOF1-209ENST00000506630 CCDC62Q6P9F0 684 aa15.01□□□□□ -0.01
TCOF1-209ENST00000506630 CXCL17Q6UXB2 119 aa15.01□□□□□ -0.01
TCOF1-209ENST00000506630 CCDC148Q8NFR7 591 aa15.01□□□□□ -0.01
TCOF1-209ENST00000506630 FAM122AQ96E09 287 aa15.01□□□□□ -0.01
TCOF1-209ENST00000506630 PGBD1Q96JS3 809 aa15.01□□□□□ -0.01
TCOF1-209ENST00000506630 GLT8D2Q9H1C3 349 aa15.01□□□□□ -0.01
TCOF1-209ENST00000506630 RTEL1Q9NZ71 1219 aa15.01□□□□□ -0.01
TCOF1-209ENST00000506630 CXXC1Q9P0U4 656 aaPredicted RBP15.01□□□□□ -0.01
TCOF1-209ENST00000506630 VPS54Q9P1Q0 977 aa15.01□□□□□ -0.01
TCOF1-209ENST00000506630 DDX41Q9UJV9 622 aaKnown RBP15.01□□□□□ -0.01
TCOF1-209ENST00000506630 PCDHA6Q9UN73 950 aa15.01□□□□□ -0.01
TCOF1-209ENST00000506630 PCDHA8Q9Y5H6 950 aa15.01□□□□□ -0.01
TCOF1-209ENST00000506630 TRIP12Q14669 1992 aaPredicted RBP15□□□□□ -0.01
TCOF1-209ENST00000506630 WDR81Q562E7 1941 aa15□□□□□ -0.01
TCOF1-209ENST00000506630 STAM2O75886 525 aa15□□□□□ -0.01
TCOF1-209ENST00000506630 DEXIO95424 95 aa15□□□□□ -0.01
TCOF1-209ENST00000506630 LARGE1O95461 756 aa15□□□□□ -0.01
TCOF1-209ENST00000506630 MYL3P08590 195 aa15□□□□□ -0.01
TCOF1-209ENST00000506630 PLA2G5P39877 138 aa15□□□□□ -0.01
TCOF1-209ENST00000506630 AAK1Q2M2I8 961 aa15□□□□□ -0.01
TCOF1-209ENST00000506630 KCNV1Q6PIU1 500 aa15□□□□□ -0.01
TCOF1-209ENST00000506630 OTOP2Q7RTS6 562 aa15□□□□□ -0.01
TCOF1-209ENST00000506630 SEZ6LQ9BYH1 1024 aa15□□□□□ -0.01
TCOF1-209ENST00000506630 C6orf50Q9HD87 102 aa15□□□□□ -0.01
TCOF1-209ENST00000506630 POLR3EQ9NVU0 708 aa15□□□□□ -0.01
TCOF1-209ENST00000506630 TMEM260Q9NX78 707 aa15□□□□□ -0.01
TCOF1-209ENST00000506630 ESYT2A0FGR8 921 aa14.99□□□□□ -0.01
TCOF1-209ENST00000506630 SORBS3O60504 671 aa14.99□□□□□ -0.01
TCOF1-209ENST00000506630 UBA1P22314 1058 aaKnown RBP14.99□□□□□ -0.01
TCOF1-209ENST00000506630 GNA11P29992 359 aa14.99□□□□□ -0.01
TCOF1-209ENST00000506630 RBM25P49756 843 aaKnown RBP14.99□□□□□ -0.01
TCOF1-209ENST00000506630 CLK2P49760 499 aaKnown RBP14.99□□□□□ -0.01
TCOF1-209ENST00000506630 PSMC6P62333 389 aa14.99□□□□□ -0.01
TCOF1-209ENST00000506630 ARHGAP1Q07960 439 aa14.99□□□□□ -0.01
TCOF1-209ENST00000506630 AP3B2Q13367 1082 aa14.99□□□□□ -0.01
TCOF1-209ENST00000506630 ME3Q16798 604 aa14.99□□□□□ -0.01
TCOF1-209ENST00000506630 JAKMIP3Q5VZ66 844 aa14.99□□□□□ -0.01
TCOF1-209ENST00000506630 PPP2R2DQ66LE6 453 aa14.99□□□□□ -0.01
TCOF1-209ENST00000506630 XRRA1Q6P2D8 792 aa14.99□□□□□ -0.01
TCOF1-209ENST00000506630 NLRX1Q86UT6 975 aa14.99□□□□□ -0.01
TCOF1-209ENST00000506630 TEX2Q8IWB9 1127 aa14.99□□□□□ -0.01
TCOF1-209ENST00000506630 RPUSD2Q8IZ73 545 aaKnown RBP14.99□□□□□ -0.01
TCOF1-209ENST00000506630 GTF3C6Q969F1 213 aa14.99□□□□□ -0.01
TCOF1-209ENST00000506630 C1QTNF1Q9BXJ1 281 aa14.99□□□□□ -0.01
TCOF1-209ENST00000506630 ANO3Q9BYT9 981 aa14.99□□□□□ -0.01
TCOF1-209ENST00000506630 ZMYND12Q9H0C1 365 aa14.99□□□□□ -0.01
TCOF1-209ENST00000506630 YBX2Q9Y2T7 364 aaKnown RBP14.99□□□□□ -0.01
TCOF1-209ENST00000506630 SLC4A7Q9Y6M7 1214 aa14.99□□□□□ -0.01
TCOF1-209ENST00000506630 UMODL1Q5DID0 1318 aa14.98□□□□□ -0.01
TCOF1-209ENST00000506630 FIBPO43427 364 aa14.98□□□□□ -0.01
TCOF1-209ENST00000506630 GGPS1O95749 300 aa14.98□□□□□ -0.01
TCOF1-209ENST00000506630 FOSP01100 380 aaPredicted RBP14.98□□□□□ -0.01
TCOF1-209ENST00000506630 MMP3P08254 477 aa14.98□□□□□ -0.01
TCOF1-209ENST00000506630 CCL23P55773 120 aa14.98□□□□□ -0.01
TCOF1-209ENST00000506630 ITGA7Q13683 1181 aa14.98□□□□□ -0.01
TCOF1-209ENST00000506630 DHX37Q8IY37 1157 aaKnown RBP14.98□□□□□ -0.01
TCOF1-209ENST00000506630 REXO1Q8N1G1 1221 aaKnown RBP14.98□□□□□ -0.01
TCOF1-209ENST00000506630 MICALL1Q8N3F8 863 aa14.98□□□□□ -0.01
TCOF1-209ENST00000506630 NECAB1Q8N987 351 aa14.98□□□□□ -0.01
TCOF1-209ENST00000506630 SLC43A3Q8NBI5 491 aa14.98□□□□□ -0.01
TCOF1-209ENST00000506630 AFG1LQ8WV93 481 aa14.98□□□□□ -0.01
TCOF1-209ENST00000506630 INPP4AQ96PE3 977 aaPredicted RBP14.98□□□□□ -0.01
TCOF1-209ENST00000506630 KIF2CQ99661 725 aa14.98□□□□□ -0.01
TCOF1-209ENST00000506630 MYH9P35579 1960 aaKnown RBP14.98□□□□□ -0.01
TCOF1-209ENST00000506630 STK36Q9NRP7 1315 aa14.97□□□□□ -0.01
TCOF1-209ENST00000506630 A6NJR5 290 aa14.97□□□□□ -0.01
TCOF1-209ENST00000506630 ZBBXA8MT70 800 aa14.97□□□□□ -0.01
TCOF1-209ENST00000506630 DTNBO60941 627 aa14.97□□□□□ -0.01
TCOF1-209ENST00000506630 TGFB3P10600 412 aa14.97□□□□□ -0.01
TCOF1-209ENST00000506630 ICAM3P32942 547 aa14.97□□□□□ -0.01
TCOF1-209ENST00000506630 NLRP5P59047 1200 aa14.97□□□□□ -0.01
TCOF1-209ENST00000506630 PURAQ00577 322 aaKnown RBP14.97□□□□□ -0.01
TCOF1-209ENST00000506630 SEMA3FQ13275 785 aa14.97□□□□□ -0.01
TCOF1-209ENST00000506630 LAMC2Q13753 1193 aa14.97□□□□□ -0.01
TCOF1-209ENST00000506630 SKIV2LQ15477 1246 aaKnown RBP14.97□□□□□ -0.01
TCOF1-209ENST00000506630 BICD2Q8TD16 824 aa14.97□□□□□ -0.01
TCOF1-209ENST00000506630 EMID1Q96A84 441 aaPredicted RBP14.97□□□□□ -0.01
TCOF1-209ENST00000506630 AIFM3Q96NN9 605 aa14.97□□□□□ -0.01
TCOF1-209ENST00000506630 MTG1Q9BT17 334 aaPredicted RBP14.97□□□□□ -0.01
TCOF1-209ENST00000506630 NOC4LQ9BVI4 516 aaKnown RBP14.97□□□□□ -0.01
TCOF1-209ENST00000506630 MLXIPQ9HAP2 919 aa14.97□□□□□ -0.01
TCOF1-209ENST00000506630 PCDHA11Q9Y5I1 949 aa14.97□□□□□ -0.01
TCOF1-209ENST00000506630 ADAMTS3O15072 1205 aa14.96□□□□□ -0.01
TCOF1-209ENST00000506630 BMP1P13497 986 aa14.96□□□□□ -0.01
TCOF1-209ENST00000506630 RABGGTBP53611 331 aa14.96□□□□□ -0.01
TCOF1-209ENST00000506630 SP2Q02086 613 aa14.96□□□□□ -0.01
TCOF1-209ENST00000506630 CELF3Q5SZQ8 465 aaKnown RBP14.96□□□□□ -0.01
TCOF1-209ENST00000506630 MYSM1Q5VVJ2 828 aa14.96□□□□□ -0.01
TCOF1-209ENST00000506630 PPTC7Q8NI37 304 aa14.96□□□□□ -0.01
TCOF1-209ENST00000506630 RASGRP4Q8TDF6 673 aa14.96□□□□□ -0.01
TCOF1-209ENST00000506630 SPATA33Q96N06 139 aa14.96□□□□□ -0.01
TCOF1-209ENST00000506630 TRPV6Q9H1D0 765 aa14.96□□□□□ -0.01
TCOF1-209ENST00000506630 SH3GLB2Q9NR46 395 aa14.96□□□□□ -0.01
TCOF1-209ENST00000506630 LIMCH1Q9UPQ0 1083 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms