RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 TERF1P54274 439 aa13.59□□□□□ -0.23
LIN54-206ENST00000506560 CEP55Q53EZ4 464 aa13.59□□□□□ -0.23
LIN54-206ENST00000506560 LRCH2Q5VUJ6 765 aa13.59□□□□□ -0.23
LIN54-206ENST00000506560 CENPPQ6IPU0 288 aa13.59□□□□□ -0.23
LIN54-206ENST00000506560 RAD9BQ6WBX8 426 aa13.59□□□□□ -0.23
LIN54-206ENST00000506560 OTOP1Q7RTM1 612 aa13.59□□□□□ -0.23
LIN54-206ENST00000506560 SCYL3Q8IZE3 742 aa13.59□□□□□ -0.23
LIN54-206ENST00000506560 ZNF507Q8TCN5 953 aa13.59□□□□□ -0.23
LIN54-206ENST00000506560 CNKSR2Q8WXI2 1034 aa13.59□□□□□ -0.23
LIN54-206ENST00000506560 CCDC47Q96A33 483 aaKnown RBP13.59□□□□□ -0.23
LIN54-206ENST00000506560 PCDHA2Q9Y5H9 948 aa13.59□□□□□ -0.23
LIN54-206ENST00000506560 PCNTO95613 3336 aa13.58□□□□□ -0.23
LIN54-206ENST00000506560 MFAP3LO75121 409 aa13.58□□□□□ -0.24
LIN54-206ENST00000506560 RPA1P27694 616 aa13.58□□□□□ -0.24
LIN54-206ENST00000506560 MIIPQ5JXC2 388 aa13.58□□□□□ -0.24
LIN54-206ENST00000506560 GPIHBP1Q8IV16 184 aa13.58□□□□□ -0.24
LIN54-206ENST00000506560 REXO1L1PQ8IX06 675 aa13.58□□□□□ -0.24
LIN54-206ENST00000506560 DYDC2Q96IM9 177 aa13.58□□□□□ -0.24
LIN54-206ENST00000506560 FAM20AQ96MK3 541 aa13.58□□□□□ -0.24
LIN54-206ENST00000506560 TUBGCP2Q9BSJ2 902 aa13.58□□□□□ -0.24
LIN54-206ENST00000506560 RUSC1Q9BVN2 902 aa13.58□□□□□ -0.24
LIN54-206ENST00000506560 WDR11Q9BZH6 1224 aa13.58□□□□□ -0.24
LIN54-206ENST00000506560 BHMT2Q9H2M3 363 aa13.58□□□□□ -0.24
LIN54-206ENST00000506560 THAP9Q9H5L6 903 aa13.58□□□□□ -0.24
LIN54-206ENST00000506560 PPP1R9AQ9ULJ8 1098 aa13.58□□□□□ -0.24
LIN54-206ENST00000506560 DOCK1Q14185 1865 aa13.58□□□□□ -0.24
LIN54-206ENST00000506560 RASSF10A6NK89 507 aa13.58□□□□□ -0.24
LIN54-206ENST00000506560 SFI1A8K8P3 1242 aa13.58□□□□□ -0.24
LIN54-206ENST00000506560 HSD17B4P51659 736 aa13.58□□□□□ -0.24
LIN54-206ENST00000506560 BACE1P56817 501 aa13.58□□□□□ -0.24
LIN54-206ENST00000506560 SPAG1Q07617 926 aa13.58□□□□□ -0.24
LIN54-206ENST00000506560 FAM26FQ5R3K3 315 aa13.58□□□□□ -0.24
LIN54-206ENST00000506560 MYRIPQ8NFW9 859 aa13.58□□□□□ -0.24
LIN54-206ENST00000506560 LPAR1Q92633 364 aa13.58□□□□□ -0.24
LIN54-206ENST00000506560 TAAR1Q96RJ0 339 aa13.58□□□□□ -0.24
LIN54-206ENST00000506560 IKZF4Q9H2S9 585 aa13.58□□□□□ -0.24
LIN54-206ENST00000506560 COL11A1P12107 1806 aaPredicted RBP13.57□□□□□ -0.24
LIN54-206ENST00000506560 RBBP6Q7Z6E9 1792 aaKnown RBP13.57□□□□□ -0.24
LIN54-206ENST00000506560 LGALS16A8MUM7 142 aa13.57□□□□□ -0.24
LIN54-206ENST00000506560 LMNB1P20700 586 aa13.57□□□□□ -0.24
LIN54-206ENST00000506560 HERC4Q5GLZ8 1057 aaPredicted RBP13.57□□□□□ -0.24
LIN54-206ENST00000506560 HAUS3Q68CZ6 603 aa13.57□□□□□ -0.24
LIN54-206ENST00000506560 PPFIBP1Q86W92 1011 aa13.57□□□□□ -0.24
LIN54-206ENST00000506560 TPH2Q8IWU9 490 aa13.57□□□□□ -0.24
LIN54-206ENST00000506560 MB21D1Q8N884 522 aa13.57□□□□□ -0.24
LIN54-206ENST00000506560 KLRG1Q96E93 195 aa13.57□□□□□ -0.24
LIN54-206ENST00000506560 REEP2Q9BRK0 252 aa13.57□□□□□ -0.24
LIN54-206ENST00000506560 PDCL3Q9H2J4 239 aa13.57□□□□□ -0.24
LIN54-206ENST00000506560 ZNF112Q9UJU3 913 aa13.57□□□□□ -0.24
LIN54-206ENST00000506560 EIF2AK2P19525 551 aaKnown RBP13.57□□□□□ -0.24
LIN54-206ENST00000506560 RPS6P62753 249 aaKnown RBP13.57□□□□□ -0.24
LIN54-206ENST00000506560 MRPS9P82933 396 aaKnown RBP13.57□□□□□ -0.24
LIN54-206ENST00000506560 GIT2Q14161 759 aa13.57□□□□□ -0.24
LIN54-206ENST00000506560 NAA30Q147X3 362 aaPredicted RBP13.57□□□□□ -0.24
LIN54-206ENST00000506560 SYT10Q6XYQ8 523 aa13.57□□□□□ -0.24
LIN54-206ENST00000506560 LRRC55Q6ZSA7 311 aa13.57□□□□□ -0.24
LIN54-206ENST00000506560 GPC2Q8N158 579 aa13.57□□□□□ -0.24
LIN54-206ENST00000506560 GUF1Q8N442 669 aaKnown RBP13.57□□□□□ -0.24
LIN54-206ENST00000506560 CCDC155Q8N6L0 562 aa13.57□□□□□ -0.24
LIN54-206ENST00000506560 ZNF280CQ8ND82 737 aa13.57□□□□□ -0.24
LIN54-206ENST00000506560 CCDC112Q8NEF3 446 aa13.57□□□□□ -0.24
LIN54-206ENST00000506560 UNC45AQ9H3U1 944 aa13.57□□□□□ -0.24
LIN54-206ENST00000506560 PPP2R2CQ9Y2T4 447 aa13.57□□□□□ -0.24
LIN54-206ENST00000506560 RLFQ13129 1914 aa13.57□□□□□ -0.24
LIN54-206ENST00000506560 PARP14Q460N5 1801 aa13.57□□□□□ -0.24
LIN54-206ENST00000506560 TTC26A0AVF1 554 aa13.56□□□□□ -0.24
LIN54-206ENST00000506560 ADM5C9JUS6 153 aa13.56□□□□□ -0.24
LIN54-206ENST00000506560 SLITRK3O94933 977 aa13.56□□□□□ -0.24
LIN54-206ENST00000506560 YBX3P16989 372 aaKnown RBP eCLIP13.56□□□□□ -0.247e-8■□□□□ 10.3
LIN54-206ENST00000506560 ERVK-24P63145 666 aa13.56□□□□□ -0.24
LIN54-206ENST00000506560 NSMFQ6X4W1 530 aa13.56□□□□□ -0.24
LIN54-206ENST00000506560 TRMT1LQ7Z2T5 733 aaKnown RBP13.56□□□□□ -0.24
LIN54-206ENST00000506560 SYTL5Q8TDW5 730 aaPredicted RBP13.56□□□□□ -0.24
LIN54-206ENST00000506560 SLC5A5Q92911 643 aa13.56□□□□□ -0.24
LIN54-206ENST00000506560 HSD17B14Q9BPX1 270 aa13.56□□□□□ -0.24
LIN54-206ENST00000506560 ZNF577Q9BSK1 485 aa13.56□□□□□ -0.24
LIN54-206ENST00000506560 MRPL44Q9H9J2 332 aaKnown RBP13.56□□□□□ -0.24
LIN54-206ENST00000506560 KCND1Q9NSA2 647 aa13.56□□□□□ -0.24
LIN54-206ENST00000506560 PHIPQ8WWQ0 1821 aa13.56□□□□□ -0.24
LIN54-206ENST00000506560 BICDL2A1A5D9 508 aa13.56□□□□□ -0.24
LIN54-206ENST00000506560 VWA5AO00534 786 aa13.56□□□□□ -0.24
LIN54-206ENST00000506560 ARHGAP6O43182 974 aa13.56□□□□□ -0.24
LIN54-206ENST00000506560 GAS7O60861 476 aa13.56□□□□□ -0.24
LIN54-206ENST00000506560 ABL1P00519 1130 aa13.56□□□□□ -0.24
LIN54-206ENST00000506560 KRT18P05783 430 aaKnown RBP13.56□□□□□ -0.24
LIN54-206ENST00000506560 EEF1GP26641 437 aaKnown RBP13.56□□□□□ -0.24
LIN54-206ENST00000506560 MTIF2P46199 727 aaKnown RBP13.56□□□□□ -0.24
LIN54-206ENST00000506560 KCNA1Q09470 495 aa13.56□□□□□ -0.24
LIN54-206ENST00000506560 DCAF15Q66K64 600 aa13.56□□□□□ -0.24
LIN54-206ENST00000506560 MCTP2Q6DN12 878 aa13.56□□□□□ -0.24
LIN54-206ENST00000506560 SFR1Q86XK3 245 aa13.56□□□□□ -0.24
LIN54-206ENST00000506560 SCFD1Q8WVM8 642 aa13.56□□□□□ -0.24
LIN54-206ENST00000506560 SH2D3AQ9BRG2 576 aa13.56□□□□□ -0.24
LIN54-206ENST00000506560 IRX2Q9BZI1 471 aaPredicted RBP13.56□□□□□ -0.24
LIN54-206ENST00000506560 STX10O60499 249 aa13.55□□□□□ -0.24
LIN54-206ENST00000506560 BANK1Q8NDB2 785 aa13.55□□□□□ -0.24
LIN54-206ENST00000506560 ANKRD20A12PQ8NF67 263 aa13.55□□□□□ -0.24
LIN54-206ENST00000506560 PRIMPOLQ96LW4 560 aa13.55□□□□□ -0.24
LIN54-206ENST00000506560 PICK1Q9NRD5 415 aa13.55□□□□□ -0.24
LIN54-206ENST00000506560 KCNH7Q9NS40 1196 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms