RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 SCRN1Q12765 414 aa8.32□□□□□ -1.08
GYPB-206ENST00000506516 RABEP1Q15276 862 aa8.32□□□□□ -1.08
GYPB-206ENST00000506516 KCNA10Q16322 511 aa8.32□□□□□ -1.08
GYPB-206ENST00000506516 PKN1Q16512 942 aa8.32□□□□□ -1.08
GYPB-206ENST00000506516 TLK2Q86UE8 772 aa8.32□□□□□ -1.08
GYPB-206ENST00000506516 NLRX1Q86UT6 975 aa8.32□□□□□ -1.08
GYPB-206ENST00000506516 KLHDC9Q8NEP7 349 aa8.32□□□□□ -1.08
GYPB-206ENST00000506516 CCDC148Q8NFR7 591 aa8.32□□□□□ -1.08
GYPB-206ENST00000506516 OR6J1Q8NGC5 347 aa8.32□□□□□ -1.08
GYPB-206ENST00000506516 DIS3LQ8TF46 1054 aaKnown RBP8.32□□□□□ -1.08
GYPB-206ENST00000506516 WASF1Q92558 559 aa8.32□□□□□ -1.08
GYPB-206ENST00000506516 VTI1AQ96AJ9 217 aa8.32□□□□□ -1.08
GYPB-206ENST00000506516 GLT1D1Q96MS3 346 aa8.32□□□□□ -1.08
GYPB-206ENST00000506516 UPF3AQ9H1J1 476 aaKnown RBP8.32□□□□□ -1.08
GYPB-206ENST00000506516 SH3GLB2Q9NR46 395 aa8.32□□□□□ -1.08
GYPB-206ENST00000506516 PCDHA6Q9UN73 950 aa8.32□□□□□ -1.08
GYPB-206ENST00000506516 GNEQ9Y223 722 aaKnown RBP8.32□□□□□ -1.08
GYPB-206ENST00000506516 PCDHA8Q9Y5H6 950 aa8.32□□□□□ -1.08
GYPB-206ENST00000506516 NR2E3Q9Y5X4 410 aa8.32□□□□□ -1.08
GYPB-206ENST00000506516 MRVI1Q9Y6F6 885 aa8.32□□□□□ -1.08
GYPB-206ENST00000506516 ESYT2A0FGR8 921 aa8.31□□□□□ -1.08
GYPB-206ENST00000506516 DDX11L8A8MPP1 907 aa8.31□□□□□ -1.08
GYPB-206ENST00000506516 TK2O00142 265 aa8.31□□□□□ -1.08
GYPB-206ENST00000506516 KPNA6O60684 536 aa8.31□□□□□ -1.08
GYPB-206ENST00000506516 CABYRO75952 493 aa8.31□□□□□ -1.08
GYPB-206ENST00000506516 ASGR1P07306 291 aa8.31□□□□□ -1.08
GYPB-206ENST00000506516 CST5P28325 142 aaPredicted RBP8.31□□□□□ -1.08
GYPB-206ENST00000506516 CPT1AP50416 773 aa8.31□□□□□ -1.08
GYPB-206ENST00000506516 NLRP5P59047 1200 aa8.31□□□□□ -1.08
GYPB-206ENST00000506516 NKX3-2P78367 333 aa8.31□□□□□ -1.08
GYPB-206ENST00000506516 AP3B2Q13367 1082 aa8.31□□□□□ -1.08
GYPB-206ENST00000506516 LAMC2Q13753 1193 aa8.31□□□□□ -1.08
GYPB-206ENST00000506516 FSCN1Q16658 493 aaKnown RBP8.31□□□□□ -1.08
GYPB-206ENST00000506516 UBE2SQ16763 222 aa8.31□□□□□ -1.08
GYPB-206ENST00000506516 ME3Q16798 604 aa8.31□□□□□ -1.08
GYPB-206ENST00000506516 LY6KQ17RY6 165 aa8.31□□□□□ -1.08
GYPB-206ENST00000506516 PCNX4Q63HM2 1172 aa8.31□□□□□ -1.08
GYPB-206ENST00000506516 GALNT17Q6IS24 598 aa8.31□□□□□ -1.08
GYPB-206ENST00000506516 ADGRD1Q6QNK2 874 aa8.31□□□□□ -1.08
GYPB-206ENST00000506516 SLC39A5Q6ZMH5 540 aa8.31□□□□□ -1.08
GYPB-206ENST00000506516 FAM177A1Q8N128 213 aaPredicted RBP8.31□□□□□ -1.08
GYPB-206ENST00000506516 FERMT2Q96AC1 680 aa8.31□□□□□ -1.08
GYPB-206ENST00000506516 LENG1Q96BZ8 264 aaPredicted RBP8.31□□□□□ -1.08
GYPB-206ENST00000506516 CDHR1Q96JP9 859 aa8.31□□□□□ -1.08
GYPB-206ENST00000506516 KIF2CQ99661 725 aa8.31□□□□□ -1.08
GYPB-206ENST00000506516 BACH2Q9BYV9 841 aa8.31□□□□□ -1.08
GYPB-206ENST00000506516 ZMYND12Q9H0C1 365 aa8.31□□□□□ -1.08
GYPB-206ENST00000506516 RTEL1Q9NZ71 1219 aa8.31□□□□□ -1.08
GYPB-206ENST00000506516 DDX41Q9UJV9 622 aaKnown RBP8.31□□□□□ -1.08
GYPB-206ENST00000506516 PHF24Q9UPV7 400 aa8.31□□□□□ -1.08
GYPB-206ENST00000506516 FRMPD4Q14CM0 1322 aa8.3□□□□□ -1.08
GYPB-206ENST00000506516 RBBP6Q7Z6E9 1792 aaKnown RBP8.3□□□□□ -1.08
GYPB-206ENST00000506516 PLXNA1Q9UIW2 1896 aa8.3□□□□□ -1.08
GYPB-206ENST00000506516 MAFGO15525 162 aa8.3□□□□□ -1.08
GYPB-206ENST00000506516 ADCY6O43306 1168 aa8.3□□□□□ -1.08
GYPB-206ENST00000506516 PPFIA3O75145 1194 aa8.3□□□□□ -1.08
GYPB-206ENST00000506516 GH1P01241 217 aa8.3□□□□□ -1.08
GYPB-206ENST00000506516 ZNF76P36508 570 aa8.3□□□□□ -1.08
GYPB-206ENST00000506516 MCM2P49736 904 aa8.3□□□□□ -1.08
GYPB-206ENST00000506516 CLK2P49760 499 aaKnown RBP8.3□□□□□ -1.08
GYPB-206ENST00000506516 MRPS9P82933 396 aaKnown RBP8.3□□□□□ -1.08
GYPB-206ENST00000506516 BEX3Q00994 111 aa8.3□□□□□ -1.08
GYPB-206ENST00000506516 NEDD9Q14511 834 aa8.3□□□□□ -1.08
GYPB-206ENST00000506516 TMEM63BQ5T3F8 832 aa8.3□□□□□ -1.08
GYPB-206ENST00000506516 CCSAPQ6IQ19 270 aaPredicted RBP8.3□□□□□ -1.08
GYPB-206ENST00000506516 CCDC62Q6P9F0 684 aa8.3□□□□□ -1.08
GYPB-206ENST00000506516 DHX37Q8IY37 1157 aaKnown RBP8.3□□□□□ -1.08
GYPB-206ENST00000506516 REXO1Q8N1G1 1221 aaKnown RBP8.3□□□□□ -1.08
GYPB-206ENST00000506516 NECAB1Q8N987 351 aa8.3□□□□□ -1.08
GYPB-206ENST00000506516 GIMAP8Q8ND71 665 aaPredicted RBP8.3□□□□□ -1.08
GYPB-206ENST00000506516 GTF3C6Q969F1 213 aa8.3□□□□□ -1.08
GYPB-206ENST00000506516 TBC1D32Q96NH3 1257 aa8.3□□□□□ -1.08
GYPB-206ENST00000506516 SEZ6LQ9BYH1 1024 aa8.3□□□□□ -1.08
GYPB-206ENST00000506516 MLXIPQ9HAP2 919 aa8.3□□□□□ -1.08
GYPB-206ENST00000506516 STARD7Q9NQZ5 370 aa8.3□□□□□ -1.08
GYPB-206ENST00000506516 SH2B1Q9NRF2 756 aaPredicted RBP8.3□□□□□ -1.08
GYPB-206ENST00000506516 POLR3EQ9NVU0 708 aa8.3□□□□□ -1.08
GYPB-206ENST00000506516 VPS54Q9P1Q0 977 aa8.3□□□□□ -1.08
GYPB-206ENST00000506516 ORC3Q9UBD5 711 aaPredicted RBP8.3□□□□□ -1.08
GYPB-206ENST00000506516 ELP1O95163 1332 aa8.29□□□□□ -1.08
GYPB-206ENST00000506516 STK36Q9NRP7 1315 aa8.29□□□□□ -1.08
GYPB-206ENST00000506516 MKI67P46013 3256 aaKnown RBP8.29□□□□□ -1.08
GYPB-206ENST00000506516 A0A1W2PQ45 241 aaPredicted RBP8.29□□□□□ -1.08
GYPB-206ENST00000506516 A0A1W2PQY0 241 aa8.29□□□□□ -1.08
GYPB-206ENST00000506516 MYADML2A6NDP7 307 aa8.29□□□□□ -1.08
GYPB-206ENST00000506516 A6NJR5 290 aa8.29□□□□□ -1.08
GYPB-206ENST00000506516 SPATA31C2B4DYI2 1134 aa8.29□□□□□ -1.08
GYPB-206ENST00000506516 FIBPO43427 364 aa8.29□□□□□ -1.08
GYPB-206ENST00000506516 ARIH2O95376 493 aa8.29□□□□□ -1.08
GYPB-206ENST00000506516 CD46P15529 392 aa8.29□□□□□ -1.08
GYPB-206ENST00000506516 ICAM3P32942 547 aa8.29□□□□□ -1.08
GYPB-206ENST00000506516 C1orf53Q5VUE5 145 aa8.29□□□□□ -1.08
GYPB-206ENST00000506516 JAKMIP3Q5VZ66 844 aa8.29□□□□□ -1.08
GYPB-206ENST00000506516 LAPTM4BQ86VI4 370 aa8.29□□□□□ -1.08
GYPB-206ENST00000506516 IL31RAQ8NI17 732 aa8.29□□□□□ -1.08
GYPB-206ENST00000506516 COPS5Q92905 334 aa8.29□□□□□ -1.08
GYPB-206ENST00000506516 EMID1Q96A84 441 aaPredicted RBP8.29□□□□□ -1.08
GYPB-206ENST00000506516 GPRASP2Q96D09 838 aa8.29□□□□□ -1.08
GYPB-206ENST00000506516 INPP4AQ96PE3 977 aaPredicted RBP8.29□□□□□ -1.08
GYPB-206ENST00000506516 SENP7Q9BQF6 1050 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms