RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 JADE2Q9NQC1 790 aa13.04□□□□□ -0.32
KDM3B-203ENST00000505756 SH3GLB2Q9NR46 395 aa13.04□□□□□ -0.32
KDM3B-203ENST00000505756 TMEM260Q9NX78 707 aa13.04□□□□□ -0.32
KDM3B-203ENST00000505756 TPCN1Q9ULQ1 816 aa13.04□□□□□ -0.32
KDM3B-203ENST00000505756 PFKFB2O60825 505 aa13.03□□□□□ -0.32
KDM3B-203ENST00000505756 ZNF286BP0CG31 522 aa13.03□□□□□ -0.32
KDM3B-203ENST00000505756 LRIT3Q3SXY7 679 aa13.03□□□□□ -0.32
KDM3B-203ENST00000505756 JAKMIP3Q5VZ66 844 aa13.03□□□□□ -0.32
KDM3B-203ENST00000505756 CYFIP1Q7L576 1253 aa13.03□□□□□ -0.32
KDM3B-203ENST00000505756 FAM177A1Q8N128 213 aaPredicted RBP13.03□□□□□ -0.32
KDM3B-203ENST00000505756 REXO1Q8N1G1 1221 aaKnown RBP13.03□□□□□ -0.32
KDM3B-203ENST00000505756 MXRA8Q9BRK3 442 aa13.03□□□□□ -0.32
KDM3B-203ENST00000505756 HIPK3Q9H422 1215 aa13.03□□□□□ -0.32
KDM3B-203ENST00000505756 TRMT13Q9NUP7 481 aaKnown RBP13.03□□□□□ -0.32
KDM3B-203ENST00000505756 VPS54Q9P1Q0 977 aa13.03□□□□□ -0.32
KDM3B-203ENST00000505756 HAS3O00219 553 aa13.02□□□□□ -0.33
KDM3B-203ENST00000505756 ATP9AO75110 1047 aa13.02□□□□□ -0.33
KDM3B-203ENST00000505756 KCNA2P16389 499 aa13.02□□□□□ -0.33
KDM3B-203ENST00000505756 PSEN2P49810 448 aa13.02□□□□□ -0.33
KDM3B-203ENST00000505756 CHMP4BP1P59074 171 aa13.02□□□□□ -0.33
KDM3B-203ENST00000505756 ARHGAP4P98171 946 aa13.02□□□□□ -0.33
KDM3B-203ENST00000505756 CUL4AQ13619 759 aa13.02□□□□□ -0.33
KDM3B-203ENST00000505756 MFSD10Q14728 455 aa13.02□□□□□ -0.33
KDM3B-203ENST00000505756 KIAA0753Q2KHM9 967 aa13.02□□□□□ -0.33
KDM3B-203ENST00000505756 CEP55Q53EZ4 464 aa13.02□□□□□ -0.33
KDM3B-203ENST00000505756 TMEM199Q8N511 208 aa13.02□□□□□ -0.33
KDM3B-203ENST00000505756 GPR20Q99678 358 aa13.02□□□□□ -0.33
KDM3B-203ENST00000505756 C16orf70Q9BSU1 422 aa13.02□□□□□ -0.33
KDM3B-203ENST00000505756 NOC4LQ9BVI4 516 aaKnown RBP13.02□□□□□ -0.33
KDM3B-203ENST00000505756 PPP1R12CQ9BZL4 782 aa13.02□□□□□ -0.33
KDM3B-203ENST00000505756 BCAS3Q9H6U6 928 aa13.02□□□□□ -0.33
KDM3B-203ENST00000505756 LGALS2P05162 132 aa13.01□□□□□ -0.33
KDM3B-203ENST00000505756 CYP3A4P08684 503 aa13.01□□□□□ -0.33
KDM3B-203ENST00000505756 ZNF76P36508 570 aa13.01□□□□□ -0.33
KDM3B-203ENST00000505756 NLRP5P59047 1200 aa13.01□□□□□ -0.33
KDM3B-203ENST00000505756 PPIGQ13427 754 aaKnown RBP eCLIP13.01□□□□□ -0.33
KDM3B-203ENST00000505756 NIPA1Q7RTP0 329 aa13.01□□□□□ -0.33
KDM3B-203ENST00000505756 C7orf31Q8N865 590 aa13.01□□□□□ -0.33
KDM3B-203ENST00000505756 PPP1R13LQ8WUF5 828 aa13.01□□□□□ -0.33
KDM3B-203ENST00000505756 CRYGNQ8WXF5 182 aa13.01□□□□□ -0.33
KDM3B-203ENST00000505756 ALG1Q9BT22 464 aa13.01□□□□□ -0.33
KDM3B-203ENST00000505756 SH2B1Q9NRF2 756 aaPredicted RBP13.01□□□□□ -0.33
KDM3B-203ENST00000505756 KCNH7Q9NS40 1196 aa13.01□□□□□ -0.33
KDM3B-203ENST00000505756 GTF2IRD1Q9UHL9 959 aa13.01□□□□□ -0.33
KDM3B-203ENST00000505756 LIMCH1Q9UPQ0 1083 aa13.01□□□□□ -0.33
KDM3B-203ENST00000505756 NOD1Q9Y239 953 aa13.01□□□□□ -0.33
KDM3B-203ENST00000505756 STK36Q9NRP7 1315 aa13.01□□□□□ -0.33
KDM3B-203ENST00000505756 MYH7BA7E2Y1 1941 aa13.01□□□□□ -0.33
KDM3B-203ENST00000505756 UMODL1Q5DID0 1318 aa13□□□□□ -0.33
KDM3B-203ENST00000505756 H3BRB1 525 aa13□□□□□ -0.33
KDM3B-203ENST00000505756 MEIS1O00470 390 aa13□□□□□ -0.33
KDM3B-203ENST00000505756 ADAMTS3O15072 1205 aa13□□□□□ -0.33
KDM3B-203ENST00000505756 CYP2C9P11712 490 aa13□□□□□ -0.33
KDM3B-203ENST00000505756 CSF2RAP15509 400 aa13□□□□□ -0.33
KDM3B-203ENST00000505756 CYP2C18P33260 490 aa13□□□□□ -0.33
KDM3B-203ENST00000505756 EPHB4P54760 987 aa13□□□□□ -0.33
KDM3B-203ENST00000505756 SHHQ15465 462 aa13□□□□□ -0.33
KDM3B-203ENST00000505756 PTGISQ16647 500 aa13□□□□□ -0.33
KDM3B-203ENST00000505756 ME3Q16798 604 aa13□□□□□ -0.33
KDM3B-203ENST00000505756 C9orf50Q5SZB4 431 aa13□□□□□ -0.33
KDM3B-203ENST00000505756 GDF6Q6KF10 455 aaPredicted RBP13□□□□□ -0.33
KDM3B-203ENST00000505756 CYP2W1Q8TAV3 490 aa13□□□□□ -0.33
KDM3B-203ENST00000505756 GTF3C6Q969F1 213 aa13□□□□□ -0.33
KDM3B-203ENST00000505756 INTS4Q96HW7 963 aaKnown RBP13□□□□□ -0.33
KDM3B-203ENST00000505756 ZSCAN31Q96LW9 406 aaPredicted RBP13□□□□□ -0.33
KDM3B-203ENST00000505756 TUT1Q9H6E5 874 aaKnown RBP13□□□□□ -0.33
KDM3B-203ENST00000505756 PKD2L1Q9P0L9 805 aa13□□□□□ -0.33
KDM3B-203ENST00000505756 HDAC6Q9UBN7 1215 aa13□□□□□ -0.33
KDM3B-203ENST00000505756 ZNF215Q9UL58 517 aaPredicted RBP13□□□□□ -0.33
KDM3B-203ENST00000505756 PCDHA4Q9UN74 947 aa13□□□□□ -0.33
KDM3B-203ENST00000505756 TRIOBPQ9H2D6 2365 aa13□□□□□ -0.33
KDM3B-203ENST00000505756 NFASCO94856 1347 aa12.99□□□□□ -0.33
KDM3B-203ENST00000505756 FAM86B1E9PN63 330 aa12.99□□□□□ -0.33
KDM3B-203ENST00000505756 PITPNM1O00562 1244 aa12.99□□□□□ -0.33
KDM3B-203ENST00000505756 FAM86B2P0C5J1 330 aa12.99□□□□□ -0.33
KDM3B-203ENST00000505756 ARP10275 920 aa12.99□□□□□ -0.33
KDM3B-203ENST00000505756 XBP1P17861 261 aa12.99□□□□□ -0.33
KDM3B-203ENST00000505756 TCF7P36402 384 aaPredicted RBP12.99□□□□□ -0.33
KDM3B-203ENST00000505756 SP4Q02446 784 aa12.99□□□□□ -0.33
KDM3B-203ENST00000505756 GALNT17Q6IS24 598 aa12.99□□□□□ -0.33
KDM3B-203ENST00000505756 CCDC155Q8N6L0 562 aa12.99□□□□□ -0.33
KDM3B-203ENST00000505756 DAGLBQ8NCG7 672 aa12.99□□□□□ -0.33
KDM3B-203ENST00000505756 RASGRP4Q8TDF6 673 aa12.99□□□□□ -0.33
KDM3B-203ENST00000505756 SEPT1Q8WYJ6 367 aa12.99□□□□□ -0.33
KDM3B-203ENST00000505756 WASF1Q92558 559 aa12.99□□□□□ -0.33
KDM3B-203ENST00000505756 TMX3Q96JJ7 454 aa12.99□□□□□ -0.33
KDM3B-203ENST00000505756 SDF4Q9BRK5 362 aa12.99□□□□□ -0.33
KDM3B-203ENST00000505756 WNT8AQ9H1J5 351 aa12.99□□□□□ -0.33
KDM3B-203ENST00000505756 AGO4Q9HCK5 861 aaKnown RBP12.99□□□□□ -0.33
KDM3B-203ENST00000505756 JPH1Q9HDC5 661 aaPredicted RBP12.99□□□□□ -0.33
KDM3B-203ENST00000505756 LAMA3Q16787 3333 aa12.99□□□□□ -0.33
KDM3B-203ENST00000505756 IGLV3-22A0A075B6J6 115 aa12.98□□□□□ -0.33
KDM3B-203ENST00000505756 SOX1O00570 391 aaPredicted RBP12.98□□□□□ -0.33
KDM3B-203ENST00000505756 LARGE1O95461 756 aa12.98□□□□□ -0.33
KDM3B-203ENST00000505756 CTDNEP1O95476 244 aa12.98□□□□□ -0.33
KDM3B-203ENST00000505756 CIITAP33076 1130 aa12.98□□□□□ -0.33
KDM3B-203ENST00000505756 CCL23P55773 120 aa12.98□□□□□ -0.33
KDM3B-203ENST00000505756 SETQ01105 290 aaPredicted RBP12.98□□□□□ -0.33
KDM3B-203ENST00000505756 BFSP2Q13515 415 aa12.98□□□□□ -0.33
KDM3B-203ENST00000505756 PSRC1Q6PGN9 363 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms