RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 ASB2Q96Q27 587 aa13.88□□□□□ -0.19
PDLIM7-214ENST00000505746 GPR20Q99678 358 aa13.88□□□□□ -0.19
PDLIM7-214ENST00000505746 PSTPIP2Q9H939 334 aa13.88□□□□□ -0.19
PDLIM7-214ENST00000505746 ZNF215Q9UL58 517 aaPredicted RBP13.88□□□□□ -0.19
PDLIM7-214ENST00000505746 RSPH10B2B2RC85 870 aa13.87□□□□□ -0.19
PDLIM7-214ENST00000505746 RSPH10BP0C881 870 aa13.87□□□□□ -0.19
PDLIM7-214ENST00000505746 SMIM10L2AP0DMW4 78 aa13.87□□□□□ -0.19
PDLIM7-214ENST00000505746 SMIM10L2BP0DMW5 78 aa13.87□□□□□ -0.19
PDLIM7-214ENST00000505746 RXRAP19793 462 aa13.87□□□□□ -0.19
PDLIM7-214ENST00000505746 SEMA3FQ13275 785 aa13.87□□□□□ -0.19
PDLIM7-214ENST00000505746 HIC1Q14526 733 aa13.87□□□□□ -0.19
PDLIM7-214ENST00000505746 CENPQQ7L2Z9 268 aaPredicted RBP13.87□□□□□ -0.19
PDLIM7-214ENST00000505746 SGMS1Q86VZ5 419 aa13.87□□□□□ -0.19
PDLIM7-214ENST00000505746 MICALL1Q8N3F8 863 aa13.87□□□□□ -0.19
PDLIM7-214ENST00000505746 FANCBQ8NB91 859 aa13.87□□□□□ -0.19
PDLIM7-214ENST00000505746 ARNTL2Q8WYA1 636 aa13.87□□□□□ -0.19
PDLIM7-214ENST00000505746 WNT8BQ93098 351 aa13.87□□□□□ -0.19
PDLIM7-214ENST00000505746 CDHR1Q96JP9 859 aa13.87□□□□□ -0.19
PDLIM7-214ENST00000505746 RNPEPQ9H4A4 650 aa13.87□□□□□ -0.19
PDLIM7-214ENST00000505746 BCAS3Q9H6U6 928 aa13.87□□□□□ -0.19
PDLIM7-214ENST00000505746 CERS4Q9HA82 394 aa13.87□□□□□ -0.19
PDLIM7-214ENST00000505746 SPDYE3A6NKU9 549 aa13.86□□□□□ -0.19
PDLIM7-214ENST00000505746 RFXAPO00287 272 aa13.86□□□□□ -0.19
PDLIM7-214ENST00000505746 CAND2O75155 1236 aa13.86□□□□□ -0.19
PDLIM7-214ENST00000505746 LGR5O75473 907 aa13.86□□□□□ -0.19
PDLIM7-214ENST00000505746 HOXC8P31273 242 aa13.86□□□□□ -0.19
PDLIM7-214ENST00000505746 DEFB103AP81534 67 aa13.86□□□□□ -0.19
PDLIM7-214ENST00000505746 TRAF7Q6Q0C0 670 aa13.86□□□□□ -0.19
PDLIM7-214ENST00000505746 TMTC3Q6ZXV5 915 aa13.86□□□□□ -0.19
PDLIM7-214ENST00000505746 CMTR1Q8N1G2 835 aaKnown RBP13.86□□□□□ -0.19
PDLIM7-214ENST00000505746 CCDC82Q8N4S0 544 aa13.86□□□□□ -0.19
PDLIM7-214ENST00000505746 IL27Q8NEV9 243 aa13.86□□□□□ -0.19
PDLIM7-214ENST00000505746 GPRASP2Q96D09 838 aa13.86□□□□□ -0.19
PDLIM7-214ENST00000505746 RAD9AQ99638 391 aa13.86□□□□□ -0.19
PDLIM7-214ENST00000505746 MTCH2Q9Y6C9 303 aa13.86□□□□□ -0.19
PDLIM7-214ENST00000505746 MAFGO15525 162 aa13.85□□□□□ -0.19
PDLIM7-214ENST00000505746 TREHO43280 583 aa13.85□□□□□ -0.19
PDLIM7-214ENST00000505746 GJB5O95377 273 aa13.85□□□□□ -0.19
PDLIM7-214ENST00000505746 MBTPS1Q14703 1052 aa13.85□□□□□ -0.19
PDLIM7-214ENST00000505746 UTP14CQ5TAP6 766 aaKnown RBP13.85□□□□□ -0.19
PDLIM7-214ENST00000505746 MICU3Q86XE3 530 aa13.85□□□□□ -0.19
PDLIM7-214ENST00000505746 RAB11FIP4Q86YS3 637 aa13.85□□□□□ -0.19
PDLIM7-214ENST00000505746 NEK1Q96PY6 1258 aa13.85□□□□□ -0.19
PDLIM7-214ENST00000505746 LRRC2Q9BYS8 371 aa13.85□□□□□ -0.19
PDLIM7-214ENST00000505746 EHMT1Q9H9B1 1298 aa13.85□□□□□ -0.19
PDLIM7-214ENST00000505746 RBM28Q9NW13 759 aaKnown RBP13.85□□□□□ -0.19
PDLIM7-214ENST00000505746 KIAA1217Q5T5P2 1943 aa13.84□□□□□ -0.19
PDLIM7-214ENST00000505746 ARHGEF15O94989 841 aa13.84□□□□□ -0.19
PDLIM7-214ENST00000505746 AMHP03971 560 aa13.84□□□□□ -0.19
PDLIM7-214ENST00000505746 SP4Q02446 784 aa13.84□□□□□ -0.19
PDLIM7-214ENST00000505746 COL9A3Q14050 684 aaPredicted RBP13.84□□□□□ -0.19
PDLIM7-214ENST00000505746 SKIV2LQ15477 1246 aaKnown RBP13.84□□□□□ -0.19
PDLIM7-214ENST00000505746 AAK1Q2M2I8 961 aa13.84□□□□□ -0.19
PDLIM7-214ENST00000505746 TCTN1Q2MV58 587 aa13.84□□□□□ -0.19
PDLIM7-214ENST00000505746 PLEKHG4Q58EX7 1191 aa13.84□□□□□ -0.19
PDLIM7-214ENST00000505746 DHX32Q7L7V1 743 aaKnown RBP13.84□□□□□ -0.19
PDLIM7-214ENST00000505746 HEATR3Q7Z4Q2 680 aa13.84□□□□□ -0.19
PDLIM7-214ENST00000505746 TMCO2Q7Z6W1 182 aaPredicted RBP13.84□□□□□ -0.19
PDLIM7-214ENST00000505746 TEX2Q8IWB9 1127 aa13.84□□□□□ -0.19
PDLIM7-214ENST00000505746 DBF4BQ8NFT6 615 aa13.84□□□□□ -0.19
PDLIM7-214ENST00000505746 SETD4Q9NVD3 440 aa13.84□□□□□ -0.19
PDLIM7-214ENST00000505746 PCDHA6Q9UN73 950 aa13.84□□□□□ -0.19
PDLIM7-214ENST00000505746 PCDHA8Q9Y5H6 950 aa13.84□□□□□ -0.19
PDLIM7-214ENST00000505746 NRCAMQ92823 1304 aa13.84□□□□□ -0.19
PDLIM7-214ENST00000505746 CHD9Q3L8U1 2897 aa13.83□□□□□ -0.2
PDLIM7-214ENST00000505746 hCG_1642624A0A1W2PR95 340 aa13.83□□□□□ -0.2
PDLIM7-214ENST00000505746 LCHNA4D1U4 455 aa13.83□□□□□ -0.2
PDLIM7-214ENST00000505746 EPOPA6NHQ4 379 aa13.83□□□□□ -0.2
PDLIM7-214ENST00000505746 TNFRSF10AO00220 468 aa13.83□□□□□ -0.2
PDLIM7-214ENST00000505746 ITGB5P18084 799 aa13.83□□□□□ -0.2
PDLIM7-214ENST00000505746 TCF7P36402 384 aaPredicted RBP13.83□□□□□ -0.2
PDLIM7-214ENST00000505746 ARHGAP4P98171 946 aa13.83□□□□□ -0.2
PDLIM7-214ENST00000505746 MTMR1Q13613 665 aa13.83□□□□□ -0.2
PDLIM7-214ENST00000505746 KRT32Q14532 448 aa13.83□□□□□ -0.2
PDLIM7-214ENST00000505746 UBE2SQ16763 222 aa13.83□□□□□ -0.2
PDLIM7-214ENST00000505746 TSGA10IPQ3SY00 556 aa13.83□□□□□ -0.2
PDLIM7-214ENST00000505746 APOA5Q6Q788 366 aa13.83□□□□□ -0.2
PDLIM7-214ENST00000505746 TRIM50Q86XT4 487 aa13.83□□□□□ -0.2
PDLIM7-214ENST00000505746 SEPT1Q8WYJ6 367 aa13.83□□□□□ -0.2
PDLIM7-214ENST00000505746 SEPT8Q92599 483 aa13.83□□□□□ -0.2
PDLIM7-214ENST00000505746 LMCD1Q9NZU5 365 aa13.83□□□□□ -0.2
PDLIM7-214ENST00000505746 INSL6Q9Y581 213 aa13.83□□□□□ -0.2
PDLIM7-214ENST00000505746 UBIAD1Q9Y5Z9 338 aa13.83□□□□□ -0.2
PDLIM7-214ENST00000505746 MYH6P13533 1939 aa13.83□□□□□ -0.2
PDLIM7-214ENST00000505746 PRUNE2Q8WUY3 3088 aa13.83□□□□□ -0.2
PDLIM7-214ENST00000505746 TANC1Q9C0D5 1861 aa13.82□□□□□ -0.2
PDLIM7-214ENST00000505746 SCN5AQ14524 2016 aa13.82□□□□□ -0.2
PDLIM7-214ENST00000505746 ZBTB43O43298 467 aa13.82□□□□□ -0.2
PDLIM7-214ENST00000505746 ATP9AO75110 1047 aa13.82□□□□□ -0.2
PDLIM7-214ENST00000505746 CDC45O75419 566 aa13.82□□□□□ -0.2
PDLIM7-214ENST00000505746 HMGB1P09429 215 aaKnown RBP13.82□□□□□ -0.2
PDLIM7-214ENST00000505746 KCNA2P16389 499 aa13.82□□□□□ -0.2
PDLIM7-214ENST00000505746 ADAM17P78536 824 aa13.82□□□□□ -0.2
PDLIM7-214ENST00000505746 EXOSC10Q01780 885 aaKnown RBP13.82□□□□□ -0.2
PDLIM7-214ENST00000505746 GRB10Q13322 594 aa13.82□□□□□ -0.2
PDLIM7-214ENST00000505746 PPP1R18Q6NYC8 613 aa13.82□□□□□ -0.2
PDLIM7-214ENST00000505746 FAM117BQ6P1L5 589 aa13.82□□□□□ -0.2
PDLIM7-214ENST00000505746 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.82□□□□□ -0.2
PDLIM7-214ENST00000505746 ADAMTS19Q8TE59 1207 aa13.82□□□□□ -0.2
PDLIM7-214ENST00000505746 LMBR1Q8WVP7 490 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms