RNA–Protein interactions for RNA: ENST00000505625.5

MATR3-211, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 7,306 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-211ENST00000505625 CNNM4Q6P4Q7 775 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 C16orf62Q7Z3J2 963 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 CCDC105Q8IYK2 499 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 DNAJC1Q96KC8 554 aaKnown RBP5.61□□□□□ -1.51
MATR3-211ENST00000505625 BLZF1Q9H2G9 400 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 LSM7Q9UK45 103 aaKnown RBP5.61□□□□□ -1.51
MATR3-211ENST00000505625 PTPN22Q9Y2R2 807 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 ZMYM3Q14202 1370 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 UBE2Q2LH0YL09 131 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 KRT33AO76009 404 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 LCP1P13796 627 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 TAF11Q15544 211 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 HAUS1Q96CS2 278 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 ZNF512Q96ME7 567 aaPredicted RBP5.61□□□□□ -1.51
MATR3-211ENST00000505625 UNC45AQ9H3U1 944 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 TJP2Q9UDY2 1190 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 APPL1Q9UKG1 709 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 ERICH3Q5RHP9 1530 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 ZNF532Q9HCE3 1301 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 UBA6A0AVT1 1052 aaPredicted RBP5.61□□□□□ -1.51
MATR3-211ENST00000505625 SNX2O60749 519 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 MAP4P27816 1152 aaKnown RBP5.61□□□□□ -1.51
MATR3-211ENST00000505625 PEX5P50542 639 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 FYB2Q5VWT5 728 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 NRSN1Q8IZ57 195 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 PPM1KQ8N3J5 372 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 SIK2Q9H0K1 926 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 BHMT2Q9H2M3 363 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.61□□□□□ -1.51
MATR3-211ENST00000505625 SYCP2Q9BX26 1530 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 ADORA2BP29275 332 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 EPHX2P34913 555 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 SOX10P56693 466 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 CYP4A22Q5TCH4 519 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 CES5AQ6NT32 575 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 MICALCLQ6ZW33 695 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.61□□□□□ -1.51
MATR3-211ENST00000505625 CXorf38Q8TB03 319 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 GBA2Q9HCG7 927 aaPredicted RBP5.61□□□□□ -1.51
MATR3-211ENST00000505625 MTRF1LQ9UGC7 380 aaKnown RBP5.61□□□□□ -1.51
MATR3-211ENST00000505625 NPHP4O75161 1426 aaPredicted RBP5.61□□□□□ -1.51
MATR3-211ENST00000505625 KRT87PA6NCN2 255 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 ENC1O14682 589 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 RNASEH1O60930 286 aaKnown RBP5.61□□□□□ -1.51
MATR3-211ENST00000505625 CAVIN2O95810 425 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 RALAP11233 206 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 PPARGP37231 505 aaPredicted RBP5.61□□□□□ -1.51
MATR3-211ENST00000505625 SETDB1Q15047 1291 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 FAM83BQ5T0W9 1011 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 RC3H1Q5TC82 1133 aaKnown RBP5.61□□□□□ -1.51
MATR3-211ENST00000505625 ANGEL2Q5VTE6 544 aaKnown RBP5.61□□□□□ -1.51
MATR3-211ENST00000505625 PKN3Q6P5Z2 889 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 KSR2Q6VAB6 950 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 CLYBLQ8N0X4 340 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 SKA1Q96BD8 255 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 STMN4Q9H169 189 aaPredicted RBP5.61□□□□□ -1.51
MATR3-211ENST00000505625 SCHIP1Q9P0W5 487 aaPredicted RBP5.61□□□□□ -1.51
MATR3-211ENST00000505625 CPA4Q9UI42 421 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 ARHGEF10O15013 1369 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 DAPK1P53355 1430 aa5.61□□□□□ -1.51
MATR3-211ENST00000505625 FAM196BA6NMK8 535 aa5.6□□□□□ -1.51
MATR3-211ENST00000505625 TACC1O75410 805 aa5.6□□□□□ -1.51
MATR3-211ENST00000505625 PSAPP07602 524 aa5.6□□□□□ -1.51
MATR3-211ENST00000505625 HOXC9P31274 260 aa5.6□□□□□ -1.51
MATR3-211ENST00000505625 HSPA4P34932 840 aa5.6□□□□□ -1.51
MATR3-211ENST00000505625 ALDH18A1P54886 795 aaKnown RBP5.6□□□□□ -1.51
MATR3-211ENST00000505625 LLGL1Q15334 1064 aa5.6□□□□□ -1.51
MATR3-211ENST00000505625 OR6B2Q6IFH4 312 aa5.6□□□□□ -1.51
MATR3-211ENST00000505625 HDDC3Q8N4P3 179 aa5.6□□□□□ -1.51
MATR3-211ENST00000505625 CCDC42Q96M95 316 aa5.6□□□□□ -1.51
MATR3-211ENST00000505625 EGFL8Q99944 293 aa5.6□□□□□ -1.51
MATR3-211ENST00000505625 LSM14BQ9BX40 385 aaKnown RBP5.6□□□□□ -1.51
MATR3-211ENST00000505625 VTI1BQ9UEU0 232 aa5.6□□□□□ -1.51
MATR3-211ENST00000505625 CFLARO15519 480 aa5.6□□□□□ -1.51
MATR3-211ENST00000505625 ZW10O43264 779 aa5.6□□□□□ -1.51
MATR3-211ENST00000505625 MGEA5O60502 916 aa5.6□□□□□ -1.51
MATR3-211ENST00000505625 ZC3H11AO75152 810 aaKnown RBP eCLIP5.6□□□□□ -1.515e-8■□□□□ 9.1
MATR3-211ENST00000505625 ENO2P09104 434 aaPredicted RBP5.6□□□□□ -1.51
MATR3-211ENST00000505625 AP1B1Q10567 949 aa5.6□□□□□ -1.51
MATR3-211ENST00000505625 EDRF1Q3B7T1 1238 aa5.6□□□□□ -1.51
MATR3-211ENST00000505625 ANKRD40Q6AI12 368 aa5.6□□□□□ -1.51
MATR3-211ENST00000505625 CABP7Q86V35 215 aa5.6□□□□□ -1.51
MATR3-211ENST00000505625 RNF135Q8IUD6 432 aa5.6□□□□□ -1.51
MATR3-211ENST00000505625 UBE2OQ9C0C9 1292 aaKnown RBP5.6□□□□□ -1.51
MATR3-211ENST00000505625 MIS12Q9H081 205 aa5.6□□□□□ -1.51
MATR3-211ENST00000505625 OSGEPL1Q9H4B0 414 aa5.6□□□□□ -1.51
MATR3-211ENST00000505625 TUT1Q9H6E5 874 aaKnown RBP5.6□□□□□ -1.51
MATR3-211ENST00000505625 ZWILCHQ9H900 591 aa5.6□□□□□ -1.51
MATR3-211ENST00000505625 KRT82Q9NSB4 513 aa5.6□□□□□ -1.51
MATR3-211ENST00000505625 DSEQ9UL01 958 aa5.6□□□□□ -1.51
MATR3-211ENST00000505625 ARAP3Q8WWN8 1544 aa5.6□□□□□ -1.51
MATR3-211ENST00000505625 ADGRF5Q8IZF2 1346 aa5.6□□□□□ -1.51
MATR3-211ENST00000505625 KIAA0586Q9BVV6 1533 aa5.6□□□□□ -1.51
MATR3-211ENST00000505625 DDIT3P35638 169 aa5.6□□□□□ -1.51
MATR3-211ENST00000505625 HIRAP54198 1017 aaPredicted RBP5.6□□□□□ -1.51
MATR3-211ENST00000505625 CHRNDQ07001 517 aa5.6□□□□□ -1.51
MATR3-211ENST00000505625 NONOQ15233 471 aaKnown RBP eCLIP5.6□□□□□ -1.51
MATR3-211ENST00000505625 ARL13BQ3SXY8 428 aa5.6□□□□□ -1.51
MATR3-211ENST00000505625 CCDC186Q7Z3E2 898 aa5.6□□□□□ -1.51
MATR3-211ENST00000505625 CENPSQ8N2Z9 138 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms