RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 MORC4Q8TE76 937 aa8.39□□□□□ -1.07
VCAN-206ENST00000505615 DHX38Q92620 1227 aaKnown RBP8.39□□□□□ -1.07
VCAN-206ENST00000505615 PBXIP1Q96AQ6 731 aa8.39□□□□□ -1.07
VCAN-206ENST00000505615 EAF2Q96CJ1 260 aaPredicted RBP8.39□□□□□ -1.07
VCAN-206ENST00000505615 ACAD9Q9H845 621 aa8.39□□□□□ -1.07
VCAN-206ENST00000505615 HOMER2Q9NSB8 354 aa8.39□□□□□ -1.07
VCAN-206ENST00000505615 CFAP47Q6ZTR5 3102 aa8.38□□□□□ -1.07
VCAN-206ENST00000505615 ATRXP46100 2492 aa8.38□□□□□ -1.07
VCAN-206ENST00000505615 ZBED9Q6R2W3 1325 aa8.38□□□□□ -1.07
VCAN-206ENST00000505615 ZNF532Q9HCE3 1301 aa8.38□□□□□ -1.07
VCAN-206ENST00000505615 F5H6K3 240 aa8.38□□□□□ -1.07
VCAN-206ENST00000505615 MBTPS2O43462 519 aa8.38□□□□□ -1.07
VCAN-206ENST00000505615 F12P00748 615 aaPredicted RBP8.38□□□□□ -1.07
VCAN-206ENST00000505615 GNAI2P04899 355 aa8.38□□□□□ -1.07
VCAN-206ENST00000505615 MYL3P08590 195 aa8.38□□□□□ -1.07
VCAN-206ENST00000505615 KLRC3Q07444 240 aa8.38□□□□□ -1.07
VCAN-206ENST00000505615 DLX2Q07687 328 aaPredicted RBP8.38□□□□□ -1.07
VCAN-206ENST00000505615 RBL2Q08999 1139 aa8.38□□□□□ -1.07
VCAN-206ENST00000505615 SLFN5Q08AF3 891 aa8.38□□□□□ -1.07
VCAN-206ENST00000505615 PKN1Q16512 942 aa8.38□□□□□ -1.07
VCAN-206ENST00000505615 FAM47CQ5HY64 1035 aa8.38□□□□□ -1.07
VCAN-206ENST00000505615 FAM117BQ6P1L5 589 aa8.38□□□□□ -1.07
VCAN-206ENST00000505615 LYPD8Q6UX82 237 aa8.38□□□□□ -1.07
VCAN-206ENST00000505615 FBXL6Q8N531 539 aa8.38□□□□□ -1.07
VCAN-206ENST00000505615 BANK1Q8NDB2 785 aa8.38□□□□□ -1.07
VCAN-206ENST00000505615 SSH3Q8TE77 659 aa8.38□□□□□ -1.07
VCAN-206ENST00000505615 AFAP1L1Q8TED9 768 aa8.38□□□□□ -1.07
VCAN-206ENST00000505615 POP1Q99575 1024 aaKnown RBP8.38□□□□□ -1.07
VCAN-206ENST00000505615 MTG1Q9BT17 334 aaPredicted RBP8.38□□□□□ -1.07
VCAN-206ENST00000505615 NSUN3Q9H649 340 aaKnown RBP8.38□□□□□ -1.07
VCAN-206ENST00000505615 VTA1Q9NP79 307 aa8.38□□□□□ -1.07
VCAN-206ENST00000505615 RNF146Q9NTX7 359 aa8.38□□□□□ -1.07
VCAN-206ENST00000505615 ABHD14A-ACY1A0A1B0GW23 586 aa8.37□□□□□ -1.07
VCAN-206ENST00000505615 RBM47A0AV96 593 aaKnown RBP8.37□□□□□ -1.07
VCAN-206ENST00000505615 PRR23AA6NEV1 266 aa8.37□□□□□ -1.07
VCAN-206ENST00000505615 USP17L12C9JPN9 530 aa8.37□□□□□ -1.07
VCAN-206ENST00000505615 USP17L21D6R901 530 aa8.37□□□□□ -1.07
VCAN-206ENST00000505615 H3BNC9 293 aa8.37□□□□□ -1.07
VCAN-206ENST00000505615 GSK3AP49840 483 aa8.37□□□□□ -1.07
VCAN-206ENST00000505615 HTRA4P83105 476 aaPredicted RBP8.37□□□□□ -1.07
VCAN-206ENST00000505615 ZXDAP98168 799 aa8.37□□□□□ -1.07
VCAN-206ENST00000505615 PTPN11Q06124 597 aaPredicted RBP8.37□□□□□ -1.07
VCAN-206ENST00000505615 PTPROQ16827 1216 aa8.37□□□□□ -1.07
VCAN-206ENST00000505615 SLFNL1Q499Z3 407 aa8.37□□□□□ -1.07
VCAN-206ENST00000505615 EPC2Q52LR7 807 aa8.37□□□□□ -1.07
VCAN-206ENST00000505615 SLC9C2Q5TAH2 1124 aa8.37□□□□□ -1.07
VCAN-206ENST00000505615 KIAA1211Q6ZU35 1233 aa8.37□□□□□ -1.07
VCAN-206ENST00000505615 LRRC8DQ7L1W4 858 aa8.37□□□□□ -1.07
VCAN-206ENST00000505615 SUGP1Q8IWZ8 645 aaKnown RBP8.37□□□□□ -1.07
VCAN-206ENST00000505615 CAGE1Q8TC20 777 aa8.37□□□□□ -1.07
VCAN-206ENST00000505615 ZFAND3Q9H8U3 227 aa8.37□□□□□ -1.07
VCAN-206ENST00000505615 ARMT1Q9H993 441 aa8.37□□□□□ -1.07
VCAN-206ENST00000505615 ATP8A2Q9NTI2 1148 aa8.37□□□□□ -1.07
VCAN-206ENST00000505615 CLDND1Q9NY35 253 aa8.37□□□□□ -1.07
VCAN-206ENST00000505615 NYAP2Q9P242 653 aa8.37□□□□□ -1.07
VCAN-206ENST00000505615 CTNNA3Q9UI47 895 aa8.37□□□□□ -1.07
VCAN-206ENST00000505615 TNNQ9UQP3 1299 aa8.37□□□□□ -1.07
VCAN-206ENST00000505615 COG6Q9Y2V7 657 aa8.37□□□□□ -1.07
VCAN-206ENST00000505615 KIAA1217Q5T5P2 1943 aa8.37□□□□□ -1.07
VCAN-206ENST00000505615 USP24Q9UPU5 2620 aa8.36□□□□□ -1.07
VCAN-206ENST00000505615 KIAA1671Q9BY89 1806 aa8.36□□□□□ -1.07
VCAN-206ENST00000505615 PKD1L2Q7Z442 2459 aa8.36□□□□□ -1.07
VCAN-206ENST00000505615 IGKV6D-41A0A0C4DH26 115 aa8.36□□□□□ -1.07
VCAN-206ENST00000505615 TBX10O75333 385 aa8.36□□□□□ -1.07
VCAN-206ENST00000505615 KRT37O76014 449 aa8.36□□□□□ -1.07
VCAN-206ENST00000505615 MBD4O95243 580 aa8.36□□□□□ -1.07
VCAN-206ENST00000505615 NR3C2P08235 984 aa8.36□□□□□ -1.07
VCAN-206ENST00000505615 SELPP16109 830 aa8.36□□□□□ -1.07
VCAN-206ENST00000505615 RASA1P20936 1047 aa8.36□□□□□ -1.07
VCAN-206ENST00000505615 CPT1AP50416 773 aa8.36□□□□□ -1.07
VCAN-206ENST00000505615 OS9Q13438 667 aaPredicted RBP8.36□□□□□ -1.07
VCAN-206ENST00000505615 SMAD4Q13485 552 aaKnown RBP8.36□□□□□ -1.07
VCAN-206ENST00000505615 MBTPS1Q14703 1052 aa8.36□□□□□ -1.07
VCAN-206ENST00000505615 CLUL1Q15846 466 aa8.36□□□□□ -1.07
VCAN-206ENST00000505615 MUM1L1Q5H9M0 696 aa8.36□□□□□ -1.07
VCAN-206ENST00000505615 GDF6Q6KF10 455 aaPredicted RBP8.36□□□□□ -1.07
VCAN-206ENST00000505615 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.36□□□□□ -1.07
VCAN-206ENST00000505615 EP400NLQ6ZTU2 488 aa8.36□□□□□ -1.07
VCAN-206ENST00000505615 ATOH1Q92858 354 aaPredicted RBP8.36□□□□□ -1.07
VCAN-206ENST00000505615 FOXJ1Q92949 421 aa8.36□□□□□ -1.07
VCAN-206ENST00000505615 ITPKCQ96DU7 683 aa8.36□□□□□ -1.07
VCAN-206ENST00000505615 ASIC4Q96FT7 647 aa8.36□□□□□ -1.07
VCAN-206ENST00000505615 ARID3AQ99856 593 aa8.36□□□□□ -1.07
VCAN-206ENST00000505615 FSD1Q9BTV5 496 aa8.36□□□□□ -1.07
VCAN-206ENST00000505615 WDR11Q9BZH6 1224 aa8.36□□□□□ -1.07
VCAN-206ENST00000505615 CYP39A1Q9NYL5 469 aa8.36□□□□□ -1.07
VCAN-206ENST00000505615 FEM1BQ9UK73 627 aa8.36□□□□□ -1.07
VCAN-206ENST00000505615 NOP58Q9Y2X3 529 aaKnown RBP8.36□□□□□ -1.07
VCAN-206ENST00000505615 CTDP1Q9Y5B0 961 aaPredicted RBP8.36□□□□□ -1.07
VCAN-206ENST00000505615 MYH7BA7E2Y1 1941 aa8.36□□□□□ -1.07
VCAN-206ENST00000505615 GPR179Q6PRD1 2367 aa8.35□□□□□ -1.07
VCAN-206ENST00000505615 ZFHX4Q86UP3 3567 aa8.35□□□□□ -1.07
VCAN-206ENST00000505615 A6NJR5 290 aa8.35□□□□□ -1.07
VCAN-206ENST00000505615 CFAP99D6REC4 459 aa8.35□□□□□ -1.07
VCAN-206ENST00000505615 STXBP3O00186 592 aa8.35□□□□□ -1.07
VCAN-206ENST00000505615 SURF6O75683 361 aaKnown RBP8.35□□□□□ -1.07
VCAN-206ENST00000505615 ZIC2O95409 532 aaPredicted RBP8.35□□□□□ -1.07
VCAN-206ENST00000505615 ID4P47928 161 aa8.35□□□□□ -1.07
VCAN-206ENST00000505615 HYAL1Q12794 435 aa8.35□□□□□ -1.07
VCAN-206ENST00000505615 GPM6BQ13491 265 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms