RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 CDK7P50613 346 aa9.42□□□□□ -0.9
CDC42SE2-208ENST00000505065 INF2Q27J81 1249 aa9.42□□□□□ -0.9
CDC42SE2-208ENST00000505065 JAKMIP3Q5VZ66 844 aa9.42□□□□□ -0.9
CDC42SE2-208ENST00000505065 FBXO16Q8IX29 292 aaPredicted RBP9.42□□□□□ -0.9
CDC42SE2-208ENST00000505065 BRMS1Q9HCU9 246 aa9.42□□□□□ -0.9
CDC42SE2-208ENST00000505065 TBC1D22BQ9NU19 505 aa9.42□□□□□ -0.9
CDC42SE2-208ENST00000505065 PCDHB6Q9Y5E3 794 aa9.42□□□□□ -0.9
CDC42SE2-208ENST00000505065 ZBTB42B2RXF5 422 aa9.41□□□□□ -0.9
CDC42SE2-208ENST00000505065 PRKAR2AP13861 404 aaKnown RBP9.41□□□□□ -0.9
CDC42SE2-208ENST00000505065 EIF2AK2P19525 551 aaKnown RBP9.41□□□□□ -0.9
CDC42SE2-208ENST00000505065 GRM1Q13255 1194 aa9.41□□□□□ -0.9
CDC42SE2-208ENST00000505065 SLC39A14Q15043 492 aa9.41□□□□□ -0.9
CDC42SE2-208ENST00000505065 AXDND1Q5T1B0 1012 aaPredicted RBP9.41□□□□□ -0.9
CDC42SE2-208ENST00000505065 PIK3AP1Q6ZUJ8 805 aa9.41□□□□□ -0.9
CDC42SE2-208ENST00000505065 DPP9Q86TI2 863 aa9.41□□□□□ -0.9
CDC42SE2-208ENST00000505065 SMAP1Q8IYB5 467 aaPredicted RBP9.41□□□□□ -0.9
CDC42SE2-208ENST00000505065 KAT2BQ92831 832 aa9.41□□□□□ -0.9
CDC42SE2-208ENST00000505065 HSD17B14Q9BPX1 270 aa9.41□□□□□ -0.9
CDC42SE2-208ENST00000505065 MMTAG2Q9BU76 263 aaKnown RBP9.41□□□□□ -0.9
CDC42SE2-208ENST00000505065 FAM184BQ9ULE4 1060 aa9.41□□□□□ -0.9
CDC42SE2-208ENST00000505065 PPME1Q9Y570 386 aa9.41□□□□□ -0.9
CDC42SE2-208ENST00000505065 CTDP1Q9Y5B0 961 aaPredicted RBP9.41□□□□□ -0.9
CDC42SE2-208ENST00000505065 F2P00734 622 aa9.41□□□□□ -0.9
CDC42SE2-208ENST00000505065 MMP3P08254 477 aa9.41□□□□□ -0.9
CDC42SE2-208ENST00000505065 ELNP15502 786 aa9.41□□□□□ -0.9
CDC42SE2-208ENST00000505065 CYP2B6P20813 491 aa9.41□□□□□ -0.9
CDC42SE2-208ENST00000505065 PLPPR4Q7Z2D5 763 aa9.41□□□□□ -0.9
CDC42SE2-208ENST00000505065 RPAINQ86UA6 219 aa9.41□□□□□ -0.9
CDC42SE2-208ENST00000505065 POTEDQ86YR6 584 aa9.41□□□□□ -0.9
CDC42SE2-208ENST00000505065 LINC00301Q8NCQ3 95 aa9.41□□□□□ -0.9
CDC42SE2-208ENST00000505065 PDLIM7Q9NR12 457 aa9.41□□□□□ -0.9
CDC42SE2-208ENST00000505065 ATG2AQ2TAZ0 1938 aa9.41□□□□□ -0.9
CDC42SE2-208ENST00000505065 MICAL3Q7RTP6 2002 aa9.41□□□□□ -0.9
CDC42SE2-208ENST00000505065 DNM1LO00429 736 aa9.41□□□□□ -0.9
CDC42SE2-208ENST00000505065 BMP15O95972 392 aa9.41□□□□□ -0.9
CDC42SE2-208ENST00000505065 CCL5P13501 91 aa9.41□□□□□ -0.9
CDC42SE2-208ENST00000505065 CYP2C19P33261 490 aa9.41□□□□□ -0.9
CDC42SE2-208ENST00000505065 PTPN11Q06124 597 aaPredicted RBP9.41□□□□□ -0.9
CDC42SE2-208ENST00000505065 PDE4DQ08499 809 aa9.41□□□□□ -0.9
CDC42SE2-208ENST00000505065 TTC38Q5R3I4 469 aa9.41□□□□□ -0.9
CDC42SE2-208ENST00000505065 NLRX1Q86UT6 975 aa9.41□□□□□ -0.9
CDC42SE2-208ENST00000505065 SLFN12Q8IYM2 578 aa9.41□□□□□ -0.9
CDC42SE2-208ENST00000505065 FAM184AQ8NB25 1140 aa9.41□□□□□ -0.9
CDC42SE2-208ENST00000505065 PGBD1Q96JS3 809 aa9.41□□□□□ -0.9
CDC42SE2-208ENST00000505065 TELO2Q9Y4R8 837 aa9.41□□□□□ -0.9
CDC42SE2-208ENST00000505065 DDX49Q9Y6V7 483 aaKnown RBP9.41□□□□□ -0.9
CDC42SE2-208ENST00000505065 COL1A2P08123 1366 aa9.41□□□□□ -0.9
CDC42SE2-208ENST00000505065 GBF1Q92538 1859 aa9.41□□□□□ -0.9
CDC42SE2-208ENST00000505065 KPNA6O60684 536 aa9.4□□□□□ -0.9
CDC42SE2-208ENST00000505065 NUCB2P80303 420 aa9.4□□□□□ -0.9
CDC42SE2-208ENST00000505065 MTMR1Q13613 665 aa9.4□□□□□ -0.9
CDC42SE2-208ENST00000505065 TARBP2Q15633 366 aaKnown RBP9.4□□□□□ -0.9
CDC42SE2-208ENST00000505065 TMEM119Q4V9L6 283 aa9.4□□□□□ -0.9
CDC42SE2-208ENST00000505065 DDX25Q9UHL0 483 aaKnown RBP9.4□□□□□ -0.9
CDC42SE2-208ENST00000505065 GRIN2DO15399 1336 aa9.4□□□□□ -0.9
CDC42SE2-208ENST00000505065 ATP4AP20648 1035 aa9.4□□□□□ -0.9
CDC42SE2-208ENST00000505065 LAMC2Q13753 1193 aa9.4□□□□□ -0.9
CDC42SE2-208ENST00000505065 TRIM29Q14134 588 aa9.4□□□□□ -0.9
CDC42SE2-208ENST00000505065 POLR3CQ9BUI4 534 aaPredicted RBP9.4□□□□□ -0.9
CDC42SE2-208ENST00000505065 UNC93B1Q9H1C4 597 aa9.4□□□□□ -0.9
CDC42SE2-208ENST00000505065 BCAS3Q9H6U6 928 aa9.4□□□□□ -0.9
CDC42SE2-208ENST00000505065 HPSEQ9Y251 543 aa9.4□□□□□ -0.9
CDC42SE2-208ENST00000505065 SRPRBQ9Y5M8 271 aaKnown RBP9.4□□□□□ -0.9
CDC42SE2-208ENST00000505065 PPFIA3O75145 1194 aa9.4□□□□□ -0.9
CDC42SE2-208ENST00000505065 ADCYAP1R1P41586 468 aa9.4□□□□□ -0.9
CDC42SE2-208ENST00000505065 NEDD9Q14511 834 aa9.4□□□□□ -0.9
CDC42SE2-208ENST00000505065 TTLL4Q14679 1199 aa9.4□□□□□ -0.9
CDC42SE2-208ENST00000505065 ELOA2Q8IYF1 753 aaPredicted RBP9.4□□□□□ -0.9
CDC42SE2-208ENST00000505065 SPATA31C1P0DKV0 1188 aa9.4□□□□□ -0.91
CDC42SE2-208ENST00000505065 SLC4A3P48751 1232 aa9.4□□□□□ -0.91
CDC42SE2-208ENST00000505065 PURAQ00577 322 aaKnown RBP9.4□□□□□ -0.91
CDC42SE2-208ENST00000505065 RAET1EQ8TD07 263 aa9.4□□□□□ -0.91
CDC42SE2-208ENST00000505065 LRRC15Q8TF66 581 aa9.4□□□□□ -0.91
CDC42SE2-208ENST00000505065 PIBF1Q8WXW3 757 aa9.4□□□□□ -0.91
CDC42SE2-208ENST00000505065 NIFKQ9BYG3 293 aaKnown RBP9.4□□□□□ -0.91
CDC42SE2-208ENST00000505065 MOXD2PA6NHM9 499 aa9.39□□□□□ -0.91
CDC42SE2-208ENST00000505065 SGPL1O95470 568 aa9.39□□□□□ -0.91
CDC42SE2-208ENST00000505065 GH1P01241 217 aa9.39□□□□□ -0.91
CDC42SE2-208ENST00000505065 GNPTABQ3T906 1256 aa9.39□□□□□ -0.91
CDC42SE2-208ENST00000505065 FAM43BQ6ZT52 329 aaPredicted RBP9.39□□□□□ -0.91
CDC42SE2-208ENST00000505065 NEK9Q8TD19 979 aa9.39□□□□□ -0.91
CDC42SE2-208ENST00000505065 UNC45AQ9H3U1 944 aa9.39□□□□□ -0.91
CDC42SE2-208ENST00000505065 STK24Q9Y6E0 443 aa9.39□□□□□ -0.91
CDC42SE2-208ENST00000505065 IGKV6-21A0A0C4DH24 114 aa9.39□□□□□ -0.91
CDC42SE2-208ENST00000505065 MYADML2A6NDP7 307 aa9.39□□□□□ -0.91
CDC42SE2-208ENST00000505065 SFNP31947 248 aa9.39□□□□□ -0.91
CDC42SE2-208ENST00000505065 AK8Q96MA6 479 aa9.39□□□□□ -0.91
CDC42SE2-208ENST00000505065 SCN5AQ14524 2016 aa9.39□□□□□ -0.91
CDC42SE2-208ENST00000505065 CCDC194A0A1B0GVG4 234 aa9.39□□□□□ -0.91
CDC42SE2-208ENST00000505065 MBLAC1A4D2B0 266 aaPredicted RBP9.39□□□□□ -0.91
CDC42SE2-208ENST00000505065 IPO5O00410 1097 aaKnown RBP9.39□□□□□ -0.91
CDC42SE2-208ENST00000505065 KRT76Q01546 638 aa9.39□□□□□ -0.91
CDC42SE2-208ENST00000505065 TNFAIP2Q03169 654 aa9.39□□□□□ -0.91
CDC42SE2-208ENST00000505065 MKRN4PQ13434 485 aaPredicted RBP9.39□□□□□ -0.91
CDC42SE2-208ENST00000505065 SAFBQ15424 915 aaKnown RBP eCLIP9.39□□□□□ -0.91
CDC42SE2-208ENST00000505065 ANO1Q5XXA6 986 aa9.39□□□□□ -0.91
CDC42SE2-208ENST00000505065 CCSER1Q9C0I3 900 aa9.39□□□□□ -0.91
CDC42SE2-208ENST00000505065 HMX1Q9NP08 348 aaPredicted RBP9.39□□□□□ -0.91
CDC42SE2-208ENST00000505065 NAP1L2Q9ULW6 460 aaPredicted RBP9.39□□□□□ -0.91
CDC42SE2-208ENST00000505065 CLIC4Q9Y696 253 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms