RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 H3BQ06 376 aaPredicted RBP15.2■□□□□ 0.02
DDX41-204ENST00000504807 GCOM1H8Y6P7 765 aaPredicted RBP15.2■□□□□ 0.02
DDX41-204ENST00000504807 HAS3O00219 553 aa15.2■□□□□ 0.02
DDX41-204ENST00000504807 MEIS2O14770 477 aa15.2■□□□□ 0.02
DDX41-204ENST00000504807 DDAH1O94760 285 aa15.2■□□□□ 0.02
DDX41-204ENST00000504807 PFKMP08237 780 aa15.2■□□□□ 0.02
DDX41-204ENST00000504807 POLR2MP0CAP2 368 aa15.2■□□□□ 0.02
DDX41-204ENST00000504807 ACTN1P12814 892 aa15.2■□□□□ 0.02
DDX41-204ENST00000504807 HOXD8P13378 290 aaPredicted RBP15.2■□□□□ 0.02
DDX41-204ENST00000504807 MYSM1Q5VVJ2 828 aa15.2■□□□□ 0.02
DDX41-204ENST00000504807 CENPQQ7L2Z9 268 aaPredicted RBP15.2■□□□□ 0.02
DDX41-204ENST00000504807 PHOSPHO2Q8TCD6 241 aa15.2■□□□□ 0.02
DDX41-204ENST00000504807 MPHOSPH6Q99547 160 aaKnown RBP15.2■□□□□ 0.02
DDX41-204ENST00000504807 SPZ1Q9BXG8 430 aa15.2■□□□□ 0.02
DDX41-204ENST00000504807 SEZ6LQ9BYH1 1024 aa15.2■□□□□ 0.02
DDX41-204ENST00000504807 FAM86C1Q9NVL1 165 aa15.2■□□□□ 0.02
DDX41-204ENST00000504807 LMCD1Q9NZU5 365 aa15.2■□□□□ 0.02
DDX41-204ENST00000504807 HDAC6Q9UBN7 1215 aa15.2■□□□□ 0.02
DDX41-204ENST00000504807 PTPRSQ13332 1948 aa15.19■□□□□ 0.02
DDX41-204ENST00000504807 DOCK5Q9H7D0 1870 aa15.19■□□□□ 0.02
DDX41-204ENST00000504807 B4DLN1 442 aa15.19■□□□□ 0.02
DDX41-204ENST00000504807 GGPS1O95749 300 aa15.19■□□□□ 0.02
DDX41-204ENST00000504807 F2P00734 622 aa15.19■□□□□ 0.02
DDX41-204ENST00000504807 IQCF3P0C7M6 154 aa15.19■□□□□ 0.02
DDX41-204ENST00000504807 MRPL12P52815 198 aaKnown RBP15.19■□□□□ 0.02
DDX41-204ENST00000504807 SART3Q15020 963 aaKnown RBP15.19■□□□□ 0.02
DDX41-204ENST00000504807 CELF3Q5SZQ8 465 aaKnown RBP15.19■□□□□ 0.02
DDX41-204ENST00000504807 TRAF7Q6Q0C0 670 aa15.19■□□□□ 0.02
DDX41-204ENST00000504807 PPTC7Q8NI37 304 aa15.19■□□□□ 0.02
DDX41-204ENST00000504807 MAP3K14Q99558 947 aa15.19■□□□□ 0.02
DDX41-204ENST00000504807 ALG1Q9BT22 464 aa15.19■□□□□ 0.02
DDX41-204ENST00000504807 OSBPL7Q9BZF2 842 aa15.19■□□□□ 0.02
DDX41-204ENST00000504807 BRPF3Q9ULD4 1205 aa15.19■□□□□ 0.02
DDX41-204ENST00000504807 KPNA6O60684 536 aa15.18■□□□□ 0.02
DDX41-204ENST00000504807 CPA1P15085 419 aa15.18■□□□□ 0.02
DDX41-204ENST00000504807 MCM5P33992 734 aa15.18■□□□□ 0.02
DDX41-204ENST00000504807 PSEN2P49810 448 aa15.18■□□□□ 0.02
DDX41-204ENST00000504807 EXOSC10Q01780 885 aaKnown RBP15.18■□□□□ 0.02
DDX41-204ENST00000504807 PTGISQ16647 500 aa15.18■□□□□ 0.02
DDX41-204ENST00000504807 TRIM71Q2Q1W2 868 aaKnown RBP15.18■□□□□ 0.02
DDX41-204ENST00000504807 TMCO2Q7Z6W1 182 aaPredicted RBP15.18■□□□□ 0.02
DDX41-204ENST00000504807 SESTD1Q86VW0 696 aa15.18■□□□□ 0.02
DDX41-204ENST00000504807 DHX37Q8IY37 1157 aaKnown RBP15.18■□□□□ 0.02
DDX41-204ENST00000504807 CCDC82Q8N4S0 544 aa15.18■□□□□ 0.02
DDX41-204ENST00000504807 C16orf70Q9BSU1 422 aa15.18■□□□□ 0.02
DDX41-204ENST00000504807 FTOQ9C0B1 505 aaKnown RBP eCLIP15.18■□□□□ 0.02
DDX41-204ENST00000504807 MAP3K20Q9NYL2 800 aaKnown RBP15.18■□□□□ 0.02
DDX41-204ENST00000504807 RTEL1Q9NZ71 1219 aa15.18■□□□□ 0.02
DDX41-204ENST00000504807 GTF2IRD1Q9UHL9 959 aa15.18■□□□□ 0.02
DDX41-204ENST00000504807 COL4A4P53420 1690 aaPredicted RBP15.18■□□□□ 0.02
DDX41-204ENST00000504807 MYH7BA7E2Y1 1941 aa15.17■□□□□ 0.02
DDX41-204ENST00000504807 TET1Q8NFU7 2136 aa15.17■□□□□ 0.02
DDX41-204ENST00000504807 ADAMTS3O15072 1205 aa15.17■□□□□ 0.02
DDX41-204ENST00000504807 SUPT20HL2P0C7V6 817 aa15.17■□□□□ 0.02
DDX41-204ENST00000504807 LIFRP42702 1097 aa15.17■□□□□ 0.02
DDX41-204ENST00000504807 ZP2Q05996 745 aa15.17■□□□□ 0.02
DDX41-204ENST00000504807 PTPN11Q06124 597 aaPredicted RBP15.17■□□□□ 0.02
DDX41-204ENST00000504807 FUT2Q10981 343 aa15.17■□□□□ 0.02
DDX41-204ENST00000504807 LAMC2Q13753 1193 aa15.17■□□□□ 0.02
DDX41-204ENST00000504807 MBTPS1Q14703 1052 aa15.17■□□□□ 0.02
DDX41-204ENST00000504807 MFSD10Q14728 455 aa15.17■□□□□ 0.02
DDX41-204ENST00000504807 DGKDQ16760 1214 aa15.17■□□□□ 0.02
DDX41-204ENST00000504807 UBE2SQ16763 222 aa15.17■□□□□ 0.02
DDX41-204ENST00000504807 BRDTQ58F21 947 aaPredicted RBP15.17■□□□□ 0.02
DDX41-204ENST00000504807 TYW1BQ6NUM6 668 aa15.17■□□□□ 0.02
DDX41-204ENST00000504807 CASC1Q6TDU7 716 aa15.17■□□□□ 0.02
DDX41-204ENST00000504807 TMTC3Q6ZXV5 915 aa15.17■□□□□ 0.02
DDX41-204ENST00000504807 TMEM87BQ96K49 555 aa15.17■□□□□ 0.02
DDX41-204ENST00000504807 INPP4AQ96PE3 977 aaPredicted RBP15.17■□□□□ 0.02
DDX41-204ENST00000504807 MTA3Q9BTC8 594 aa15.17■□□□□ 0.02
DDX41-204ENST00000504807 SUGCTQ9HAC7 445 aa15.17■□□□□ 0.02
DDX41-204ENST00000504807 PITPNM1O00562 1244 aa15.16■□□□□ 0.02
DDX41-204ENST00000504807 NBNO60934 754 aa15.16■□□□□ 0.02
DDX41-204ENST00000504807 CASTP20810 708 aaKnown RBP15.16■□□□□ 0.02
DDX41-204ENST00000504807 CCND2P30279 289 aa15.16■□□□□ 0.02
DDX41-204ENST00000504807 TCF15Q12870 199 aa15.16■□□□□ 0.02
DDX41-204ENST00000504807 KIAA0753Q2KHM9 967 aa15.16■□□□□ 0.02
DDX41-204ENST00000504807 PUS10Q3MIT2 529 aaKnown RBP15.16■□□□□ 0.02
DDX41-204ENST00000504807 NFXL1Q6ZNB6 911 aa15.16■□□□□ 0.02
DDX41-204ENST00000504807 SGMS1Q86VZ5 419 aa15.16■□□□□ 0.02
DDX41-204ENST00000504807 TRIM50Q86XT4 487 aa15.16■□□□□ 0.02
DDX41-204ENST00000504807 SAMD3Q8N6K7 520 aa15.16■□□□□ 0.02
DDX41-204ENST00000504807 CTCFLQ8NI51 663 aaPredicted RBP15.16■□□□□ 0.02
DDX41-204ENST00000504807 RRP36Q96EU6 259 aaKnown RBP15.16■□□□□ 0.02
DDX41-204ENST00000504807 SPATA33Q96N06 139 aa15.16■□□□□ 0.02
DDX41-204ENST00000504807 FAM217BQ9NTX9 383 aaPredicted RBP15.16■□□□□ 0.02
DDX41-204ENST00000504807 MUTYHQ9UIF7 546 aa15.16■□□□□ 0.02
DDX41-204ENST00000504807 PTPRZ1P23471 2315 aaPredicted RBP15.16■□□□□ 0.02
DDX41-204ENST00000504807 CNTNAP5Q8WYK1 1306 aa15.16■□□□□ 0.02
DDX41-204ENST00000504807 CCDC69A6NI79 296 aa15.15■□□□□ 0.02
DDX41-204ENST00000504807 SPATA31C2B4DYI2 1134 aa15.15■□□□□ 0.02
DDX41-204ENST00000504807 ATP9AO75110 1047 aa15.15■□□□□ 0.02
DDX41-204ENST00000504807 EP400NLQ6ZTU2 488 aa15.15■□□□□ 0.02
DDX41-204ENST00000504807 MICU3Q86XE3 530 aa15.15■□□□□ 0.02
DDX41-204ENST00000504807 FANCBQ8NB91 859 aa15.15■□□□□ 0.02
DDX41-204ENST00000504807 NEK9Q8TD19 979 aa15.15■□□□□ 0.02
DDX41-204ENST00000504807 ZBED2Q9BTP6 218 aa15.15■□□□□ 0.02
DDX41-204ENST00000504807 PIK3CDO00329 1044 aa15.14■□□□□ 0.01
DDX41-204ENST00000504807 CKBP12277 381 aa15.14■□□□□ 0.01
DDX41-204ENST00000504807 ITGB5P18084 799 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms