RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 COBLO75128 1261 aa11.7□□□□□ -0.54
TPM3-217ENST00000504663 LETM1O95202 739 aaPredicted RBP11.7□□□□□ -0.54
TPM3-217ENST00000504663 PGK2P07205 417 aa11.7□□□□□ -0.54
TPM3-217ENST00000504663 BMP6P22004 513 aa11.7□□□□□ -0.54
TPM3-217ENST00000504663 ICAM3P32942 547 aa11.7□□□□□ -0.54
TPM3-217ENST00000504663 TYRO3Q06418 890 aa11.7□□□□□ -0.54
TPM3-217ENST00000504663 DPYDQ12882 1025 aa11.7□□□□□ -0.54
TPM3-217ENST00000504663 GRB14Q14449 540 aa11.7□□□□□ -0.54
TPM3-217ENST00000504663 POSTNQ15063 836 aa11.7□□□□□ -0.54
TPM3-217ENST00000504663 ZNF792Q3KQV3 632 aa11.7□□□□□ -0.54
TPM3-217ENST00000504663 CNNM3Q8NE01 707 aa11.7□□□□□ -0.54
TPM3-217ENST00000504663 SNX29Q8TEQ0 813 aa11.7□□□□□ -0.54
TPM3-217ENST00000504663 SMCR8Q8TEV9 937 aaPredicted RBP11.7□□□□□ -0.54
TPM3-217ENST00000504663 IWS1Q96ST2 819 aa11.7□□□□□ -0.54
TPM3-217ENST00000504663 RIT2Q99578 217 aa11.7□□□□□ -0.54
TPM3-217ENST00000504663 RBSNQ9H1K0 784 aa11.7□□□□□ -0.54
TPM3-217ENST00000504663 BCAS3Q9H6U6 928 aa11.7□□□□□ -0.54
TPM3-217ENST00000504663 KBTBD4Q9NVX7 518 aa11.7□□□□□ -0.54
TPM3-217ENST00000504663 WRAP73Q9P2S5 460 aaPredicted RBP11.7□□□□□ -0.54
TPM3-217ENST00000504663 USP25Q9UHP3 1055 aa11.7□□□□□ -0.54
TPM3-217ENST00000504663 POTEB3A0JP26 581 aa11.69□□□□□ -0.54
TPM3-217ENST00000504663 IPO5O00410 1097 aaKnown RBP11.69□□□□□ -0.54
TPM3-217ENST00000504663 SLC26A4O43511 780 aa11.69□□□□□ -0.54
TPM3-217ENST00000504663 KLRC4O43908 158 aa11.69□□□□□ -0.54
TPM3-217ENST00000504663 CCNE2O96020 404 aa11.69□□□□□ -0.54
TPM3-217ENST00000504663 IGHA2P01877 340 aa11.69□□□□□ -0.54
TPM3-217ENST00000504663 MYCLP12524 364 aaPredicted RBP11.69□□□□□ -0.54
TPM3-217ENST00000504663 CTGFP29279 349 aa11.69□□□□□ -0.54
TPM3-217ENST00000504663 ZNF76P36508 570 aa11.69□□□□□ -0.54
TPM3-217ENST00000504663 UBA7P41226 1012 aa11.69□□□□□ -0.54
TPM3-217ENST00000504663 CAP1Q01518 475 aa11.69□□□□□ -0.54
TPM3-217ENST00000504663 MTMR1Q13613 665 aa11.69□□□□□ -0.54
TPM3-217ENST00000504663 TMEM266Q2M3C6 531 aa11.69□□□□□ -0.54
TPM3-217ENST00000504663 LRCH2Q5VUJ6 765 aa11.69□□□□□ -0.54
TPM3-217ENST00000504663 POTEBQ6S5H4 581 aa11.69□□□□□ -0.54
TPM3-217ENST00000504663 C11orf57Q6ZUT1 292 aaPredicted RBP11.69□□□□□ -0.54
TPM3-217ENST00000504663 GPR142Q7Z601 462 aa11.69□□□□□ -0.54
TPM3-217ENST00000504663 ABRAQ8N0Z2 381 aa11.69□□□□□ -0.54
TPM3-217ENST00000504663 CCDC102AQ96A19 550 aa11.69□□□□□ -0.54
TPM3-217ENST00000504663 PLIN2Q99541 437 aa11.69□□□□□ -0.54
TPM3-217ENST00000504663 MMP19Q99542 508 aa11.69□□□□□ -0.54
TPM3-217ENST00000504663 HSD17B14Q9BPX1 270 aa11.69□□□□□ -0.54
TPM3-217ENST00000504663 ZNF577Q9BSK1 485 aa11.69□□□□□ -0.54
TPM3-217ENST00000504663 KATNBL1Q9H079 304 aa11.69□□□□□ -0.54
TPM3-217ENST00000504663 CPA4Q9UI42 421 aa11.69□□□□□ -0.54
TPM3-217ENST00000504663 ABT1Q9ULW3 272 aaKnown RBP11.69□□□□□ -0.54
TPM3-217ENST00000504663 PCDHA5Q9Y5H7 936 aa11.69□□□□□ -0.54
TPM3-217ENST00000504663 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.68□□□□□ -0.54
TPM3-217ENST00000504663 SPATA31C2B4DYI2 1134 aa11.68□□□□□ -0.54
TPM3-217ENST00000504663 TLR2O60603 784 aa11.68□□□□□ -0.54
TPM3-217ENST00000504663 AOC2O75106 756 aa11.68□□□□□ -0.54
TPM3-217ENST00000504663 STAM2O75886 525 aa11.68□□□□□ -0.54
TPM3-217ENST00000504663 YY1P25490 414 aa11.68□□□□□ -0.54
TPM3-217ENST00000504663 RPA1P27694 616 aa11.68□□□□□ -0.54
TPM3-217ENST00000504663 ADORA2AP29274 412 aa11.68□□□□□ -0.54
TPM3-217ENST00000504663 STAT6P42226 847 aa11.68□□□□□ -0.54
TPM3-217ENST00000504663 APLP1P51693 650 aa11.68□□□□□ -0.54
TPM3-217ENST00000504663 NUBP1P53384 320 aa11.68□□□□□ -0.54
TPM3-217ENST00000504663 SP2Q02086 613 aa11.68□□□□□ -0.54
TPM3-217ENST00000504663 CRHR2Q13324 411 aa11.68□□□□□ -0.54
TPM3-217ENST00000504663 CUL4BQ13620 913 aa11.68□□□□□ -0.54
TPM3-217ENST00000504663 TAF1CQ15572 869 aaPredicted RBP11.68□□□□□ -0.54
TPM3-217ENST00000504663 MORN1Q5T089 497 aa11.68□□□□□ -0.54
TPM3-217ENST00000504663 RRAGBQ5VZM2 374 aa11.68□□□□□ -0.54
TPM3-217ENST00000504663 NCAPH2Q6IBW4 605 aa11.68□□□□□ -0.54
TPM3-217ENST00000504663 CATSPER3Q86XQ3 398 aa11.68□□□□□ -0.54
TPM3-217ENST00000504663 IQUBQ8NA54 791 aa11.68□□□□□ -0.54
TPM3-217ENST00000504663 USP6NLQ92738 828 aa11.68□□□□□ -0.54
TPM3-217ENST00000504663 STAMQ92783 540 aa11.68□□□□□ -0.54
TPM3-217ENST00000504663 POLR3CQ9BUI4 534 aaPredicted RBP11.68□□□□□ -0.54
TPM3-217ENST00000504663 TEKT3Q9BXF9 490 aa11.68□□□□□ -0.54
TPM3-217ENST00000504663 TSPY26PQ9H489 355 aa11.68□□□□□ -0.54
TPM3-217ENST00000504663 SLC24A3Q9HC58 644 aa11.68□□□□□ -0.54
TPM3-217ENST00000504663 CREBZFQ9NS37 354 aa11.68□□□□□ -0.54
TPM3-217ENST00000504663 STK17AQ9UEE5 414 aa11.68□□□□□ -0.54
TPM3-217ENST00000504663 MAN1B1Q9UKM7 699 aa11.68□□□□□ -0.54
TPM3-217ENST00000504663 NFASCO94856 1347 aa11.67□□□□□ -0.54
TPM3-217ENST00000504663 LOC102724159A0A0B4J2E5 919 aa11.67□□□□□ -0.54
TPM3-217ENST00000504663 POTEFA5A3E0 1075 aa11.67□□□□□ -0.54
TPM3-217ENST00000504663 GAS7O60861 476 aa11.67□□□□□ -0.54
TPM3-217ENST00000504663 ARIH2O95376 493 aa11.67□□□□□ -0.54
TPM3-217ENST00000504663 FCER1AP12319 257 aa11.67□□□□□ -0.54
TPM3-217ENST00000504663 TXLNAP40222 546 aa11.67□□□□□ -0.54
TPM3-217ENST00000504663 AFMP43652 599 aa11.67□□□□□ -0.54
TPM3-217ENST00000504663 INHBEP58166 350 aa11.67□□□□□ -0.54
TPM3-217ENST00000504663 PSMC6P62333 389 aa11.67□□□□□ -0.54
TPM3-217ENST00000504663 CCNA1P78396 465 aa11.67□□□□□ -0.54
TPM3-217ENST00000504663 SREBF2Q12772 1141 aa11.67□□□□□ -0.54
TPM3-217ENST00000504663 MORC3Q14149 939 aa11.67□□□□□ -0.54
TPM3-217ENST00000504663 PWP2Q15269 919 aaKnown RBP11.67□□□□□ -0.54
TPM3-217ENST00000504663 DPCR1Q3MIW9 517 aa11.67□□□□□ -0.54
TPM3-217ENST00000504663 KRT79Q5XKE5 535 aa11.67□□□□□ -0.54
TPM3-217ENST00000504663 CNNM4Q6P4Q7 775 aa11.67□□□□□ -0.54
TPM3-217ENST00000504663 POTEGQ6S5H5 508 aa11.67□□□□□ -0.54
TPM3-217ENST00000504663 RAD54LQ92698 747 aa11.67□□□□□ -0.54
TPM3-217ENST00000504663 SENP7Q9BQF6 1050 aa11.67□□□□□ -0.54
TPM3-217ENST00000504663 EIF2AK1Q9BQI3 630 aaKnown RBP11.67□□□□□ -0.54
TPM3-217ENST00000504663 SDF4Q9BRK5 362 aa11.67□□□□□ -0.54
TPM3-217ENST00000504663 PYM1Q9BRP8 204 aaKnown RBP11.67□□□□□ -0.54
TPM3-217ENST00000504663 RAB34Q9BZG1 259 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms