RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 PPFIA4O75335 1185 aa16.3■□□□□ 0.2
HOXC9-202ENST00000504557 F2P00734 622 aa16.3■□□□□ 0.2
HOXC9-202ENST00000504557 ZNF76P36508 570 aa16.3■□□□□ 0.2
HOXC9-202ENST00000504557 PTPN11Q06124 597 aaPredicted RBP16.3■□□□□ 0.2
HOXC9-202ENST00000504557 METTL7BQ6UX53 244 aa16.3■□□□□ 0.2
HOXC9-202ENST00000504557 ZNF713Q8N859 430 aaPredicted RBP16.3■□□□□ 0.2
HOXC9-202ENST00000504557 GPRASP2Q96D09 838 aa16.3■□□□□ 0.2
HOXC9-202ENST00000504557 TM6SF1Q9BZW5 370 aa16.3■□□□□ 0.2
HOXC9-202ENST00000504557 VPS54Q9P1Q0 977 aa16.3■□□□□ 0.2
HOXC9-202ENST00000504557 GTF2IRD1Q9UHL9 959 aa16.3■□□□□ 0.2
HOXC9-202ENST00000504557 NID2Q14112 1375 aa16.29■□□□□ 0.2
HOXC9-202ENST00000504557 H3BRB1 525 aa16.29■□□□□ 0.2
HOXC9-202ENST00000504557 FGBP02675 491 aa16.29■□□□□ 0.2
HOXC9-202ENST00000504557 BFSP2Q13515 415 aa16.29■□□□□ 0.2
HOXC9-202ENST00000504557 PKN1Q16512 942 aa16.29■□□□□ 0.2
HOXC9-202ENST00000504557 FAM109BQ6ICB4 259 aaPredicted RBP16.29■□□□□ 0.2
HOXC9-202ENST00000504557 PSRC1Q6PGN9 363 aaPredicted RBP16.29■□□□□ 0.2
HOXC9-202ENST00000504557 FBXL16Q8N461 479 aa16.29■□□□□ 0.2
HOXC9-202ENST00000504557 CYP2W1Q8TAV3 490 aa16.29■□□□□ 0.2
HOXC9-202ENST00000504557 RASGRP4Q8TDF6 673 aa16.29■□□□□ 0.2
HOXC9-202ENST00000504557 GPR20Q99678 358 aa16.29■□□□□ 0.2
HOXC9-202ENST00000504557 C16orf70Q9BSU1 422 aa16.29■□□□□ 0.2
HOXC9-202ENST00000504557 TUT1Q9H6E5 874 aaKnown RBP16.29■□□□□ 0.2
HOXC9-202ENST00000504557 C6orf50Q9HD87 102 aa16.29■□□□□ 0.2
HOXC9-202ENST00000504557 UBIAD1Q9Y5Z9 338 aa16.29■□□□□ 0.2
HOXC9-202ENST00000504557 LAMA2P24043 3122 aaKnown RBP16.28■□□□□ 0.2
HOXC9-202ENST00000504557 GRXCR1A8MXD5 290 aa16.28■□□□□ 0.2
HOXC9-202ENST00000504557 SEC24BO95487 1268 aa16.28■□□□□ 0.2
HOXC9-202ENST00000504557 FOSP01100 380 aaPredicted RBP16.28■□□□□ 0.2
HOXC9-202ENST00000504557 IFNAR1P17181 557 aa16.28■□□□□ 0.2
HOXC9-202ENST00000504557 SSRP1Q08945 709 aaKnown RBP16.28■□□□□ 0.2
HOXC9-202ENST00000504557 NTRK3Q16288 839 aa16.28■□□□□ 0.2
HOXC9-202ENST00000504557 ZNF697Q5TEC3 545 aa16.28■□□□□ 0.2
HOXC9-202ENST00000504557 TRIM22Q8IYM9 498 aa16.28■□□□□ 0.2
HOXC9-202ENST00000504557 CCDC12Q8WUD4 166 aaPredicted RBP16.28■□□□□ 0.2
HOXC9-202ENST00000504557 CDHR1Q96JP9 859 aa16.28■□□□□ 0.2
HOXC9-202ENST00000504557 MXRA8Q9BRK3 442 aa16.28■□□□□ 0.2
HOXC9-202ENST00000504557 RNF26Q9BY78 433 aaPredicted RBP16.28■□□□□ 0.2
HOXC9-202ENST00000504557 FTOQ9C0B1 505 aaKnown RBP eCLIP16.28■□□□□ 0.2
HOXC9-202ENST00000504557 JADE2Q9NQC1 790 aa16.28■□□□□ 0.2
HOXC9-202ENST00000504557 MYH9P35579 1960 aaKnown RBP16.27■□□□□ 0.2
HOXC9-202ENST00000504557 DDX39AO00148 427 aaKnown RBP16.27■□□□□ 0.2
HOXC9-202ENST00000504557 HAS3O00219 553 aa16.27■□□□□ 0.2
HOXC9-202ENST00000504557 HOXD8P13378 290 aaPredicted RBP16.27■□□□□ 0.2
HOXC9-202ENST00000504557 KCNA2P16389 499 aa16.27■□□□□ 0.2
HOXC9-202ENST00000504557 MARK3P27448 753 aa16.27■□□□□ 0.2
HOXC9-202ENST00000504557 TCF7P36402 384 aaPredicted RBP16.27■□□□□ 0.2
HOXC9-202ENST00000504557 AP3B2Q13367 1082 aa16.27■□□□□ 0.2
HOXC9-202ENST00000504557 HIC1Q14526 733 aa16.27■□□□□ 0.2
HOXC9-202ENST00000504557 RPUSD2Q8IZ73 545 aaKnown RBP16.27■□□□□ 0.2
HOXC9-202ENST00000504557 REXO1Q8N1G1 1221 aaKnown RBP16.27■□□□□ 0.2
HOXC9-202ENST00000504557 CCDC155Q8N6L0 562 aa16.27■□□□□ 0.2
HOXC9-202ENST00000504557 GIMAP8Q8ND71 665 aaPredicted RBP16.27■□□□□ 0.2
HOXC9-202ENST00000504557 DHX38Q92620 1227 aaKnown RBP16.27■□□□□ 0.2
HOXC9-202ENST00000504557 GLT8D2Q9H1C3 349 aa16.27■□□□□ 0.2
HOXC9-202ENST00000504557 CXXC1Q9P0U4 656 aaPredicted RBP16.27■□□□□ 0.2
HOXC9-202ENST00000504557 WDR81Q562E7 1941 aa16.26■□□□□ 0.19
HOXC9-202ENST00000504557 C17orf102A2RUQ5 167 aa16.26■□□□□ 0.19
HOXC9-202ENST00000504557 IQCF3P0C7M6 154 aa16.26■□□□□ 0.19
HOXC9-202ENST00000504557 SMIM10L2AP0DMW4 78 aa16.26■□□□□ 0.19
HOXC9-202ENST00000504557 SMIM10L2BP0DMW5 78 aa16.26■□□□□ 0.19
HOXC9-202ENST00000504557 ARP10275 920 aa16.26■□□□□ 0.19
HOXC9-202ENST00000504557 CLK2P49760 499 aaKnown RBP16.26■□□□□ 0.19
HOXC9-202ENST00000504557 EVCP57679 992 aa16.26■□□□□ 0.19
HOXC9-202ENST00000504557 NLRP5P59047 1200 aa16.26■□□□□ 0.19
HOXC9-202ENST00000504557 ARHGAP4P98171 946 aa16.26■□□□□ 0.19
HOXC9-202ENST00000504557 SESTD1Q86VW0 696 aa16.26■□□□□ 0.19
HOXC9-202ENST00000504557 CCDC148Q8NFR7 591 aa16.26■□□□□ 0.19
HOXC9-202ENST00000504557 ZNF274Q96GC6 653 aaPredicted RBP16.26■□□□□ 0.19
HOXC9-202ENST00000504557 AIFM3Q96NN9 605 aa16.26■□□□□ 0.19
HOXC9-202ENST00000504557 CTAGE1Q96RT6 745 aa16.26■□□□□ 0.19
HOXC9-202ENST00000504557 SENP7Q9BQF6 1050 aa16.26■□□□□ 0.19
HOXC9-202ENST00000504557 ZMYND12Q9H0C1 365 aa16.26■□□□□ 0.19
HOXC9-202ENST00000504557 SLKQ9H2G2 1235 aaPredicted RBP16.26■□□□□ 0.19
HOXC9-202ENST00000504557 MTIF3Q9H2K0 278 aaKnown RBP16.26■□□□□ 0.19
HOXC9-202ENST00000504557 KCNH7Q9NS40 1196 aa16.26■□□□□ 0.19
HOXC9-202ENST00000504557 ZNF215Q9UL58 517 aaPredicted RBP16.26■□□□□ 0.19
HOXC9-202ENST00000504557 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.25■□□□□ 0.19
HOXC9-202ENST00000504557 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.25■□□□□ 0.19
HOXC9-202ENST00000504557 GNA11P29992 359 aa16.25■□□□□ 0.19
HOXC9-202ENST00000504557 SREBF1P36956 1147 aa16.25■□□□□ 0.19
HOXC9-202ENST00000504557 AK2P54819 239 aa16.25■□□□□ 0.19
HOXC9-202ENST00000504557 SMAD3P84022 425 aaKnown RBP16.25■□□□□ 0.19
HOXC9-202ENST00000504557 CEP55Q53EZ4 464 aa16.25■□□□□ 0.19
HOXC9-202ENST00000504557 GPR153Q6NV75 609 aa16.25■□□□□ 0.19
HOXC9-202ENST00000504557 CPLX2Q6PUV4 134 aaKnown RBP16.25■□□□□ 0.19
HOXC9-202ENST00000504557 PLA2G4DQ86XP0 818 aa16.25■□□□□ 0.19
HOXC9-202ENST00000504557 GLG1Q92896 1179 aa16.25■□□□□ 0.19
HOXC9-202ENST00000504557 ATP6V0A1Q93050 837 aa16.25■□□□□ 0.19
HOXC9-202ENST00000504557 WNT8BQ93098 351 aa16.25■□□□□ 0.19
HOXC9-202ENST00000504557 SDF4Q9BRK5 362 aa16.25■□□□□ 0.19
HOXC9-202ENST00000504557 JPH1Q9HDC5 661 aaPredicted RBP16.25■□□□□ 0.19
HOXC9-202ENST00000504557 SETD4Q9NVD3 440 aa16.25■□□□□ 0.19
HOXC9-202ENST00000504557 MTMR10Q9NXD2 777 aa16.25■□□□□ 0.19
HOXC9-202ENST00000504557 TPCN1Q9ULQ1 816 aa16.25■□□□□ 0.19
HOXC9-202ENST00000504557 LOXHD1Q8IVV2 1947 aa16.25■□□□□ 0.19
HOXC9-202ENST00000504557 GSTTP1A0A1W2PQM5 241 aa16.24■□□□□ 0.19
HOXC9-202ENST00000504557 ESYT2A0FGR8 921 aa16.24■□□□□ 0.19
HOXC9-202ENST00000504557 PITPNM1O00562 1244 aa16.24■□□□□ 0.19
HOXC9-202ENST00000504557 CKBP12277 381 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms