RNA–Protein interactions for RNA: ENST00000504274.1

COPS4-203, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 457 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-203ENST00000504274 TUSC3Q13454 348 aa7.44□□□□□ -1.22
COPS4-203ENST00000504274 TARBP2Q15633 366 aaKnown RBP7.44□□□□□ -1.22
COPS4-203ENST00000504274 GPR19Q15760 415 aa7.44□□□□□ -1.22
COPS4-203ENST00000504274 CYP4F22Q6NT55 531 aa7.44□□□□□ -1.22
COPS4-203ENST00000504274 OVCH1Q7RTY7 1134 aa7.44□□□□□ -1.22
COPS4-203ENST00000504274 PTRH1Q86Y79 214 aaKnown RBP7.44□□□□□ -1.22
COPS4-203ENST00000504274 FAM126BQ8IXS8 530 aa7.44□□□□□ -1.22
COPS4-203ENST00000504274 PANK1Q8TE04 598 aa7.44□□□□□ -1.22
COPS4-203ENST00000504274 CELF4Q9BZC1 486 aaKnown RBP7.44□□□□□ -1.22
COPS4-203ENST00000504274 RNF38Q9H0F5 515 aa7.44□□□□□ -1.22
COPS4-203ENST00000504274 SMURF1Q9HCE7 757 aa7.44□□□□□ -1.22
COPS4-203ENST00000504274 TCAF2A6NFQ2 919 aa7.43□□□□□ -1.22
COPS4-203ENST00000504274 MAN2B1O00754 1011 aa7.43□□□□□ -1.22
COPS4-203ENST00000504274 ASLP04424 464 aa7.43□□□□□ -1.22
COPS4-203ENST00000504274 HSD3B2P26439 372 aa7.43□□□□□ -1.22
COPS4-203ENST00000504274 IGFALSP35858 605 aa7.43□□□□□ -1.22
COPS4-203ENST00000504274 RAP1GAPP47736 663 aa7.43□□□□□ -1.22
COPS4-203ENST00000504274 GYS2P54840 703 aa7.43□□□□□ -1.22
COPS4-203ENST00000504274 LACTBP83111 547 aaPredicted RBP7.43□□□□□ -1.22
COPS4-203ENST00000504274 CACNB2Q08289 660 aaPredicted RBP7.43□□□□□ -1.22
COPS4-203ENST00000504274 FAM47CQ5HY64 1035 aa7.43□□□□□ -1.22
COPS4-203ENST00000504274 FSTL4Q6MZW2 842 aa7.43□□□□□ -1.22
COPS4-203ENST00000504274 ETV3LQ6ZN32 361 aa7.43□□□□□ -1.22
COPS4-203ENST00000504274 CILP2Q8IUL8 1156 aa7.43□□□□□ -1.22
COPS4-203ENST00000504274 NIM1KQ8IY84 436 aa7.43□□□□□ -1.22
COPS4-203ENST00000504274 BHLHE22Q8NFJ8 381 aaPredicted RBP7.43□□□□□ -1.22
COPS4-203ENST00000504274 PHOSPHO1Q8TCT1 267 aa7.43□□□□□ -1.22
COPS4-203ENST00000504274 CPA5Q8WXQ8 436 aa7.43□□□□□ -1.22
COPS4-203ENST00000504274 SIGLEC10Q96LC7 697 aa7.43□□□□□ -1.22
COPS4-203ENST00000504274 NPIPB6E9PJ23 425 aa7.42□□□□□ -1.22
COPS4-203ENST00000504274 GLRX3O76003 335 aaKnown RBP7.42□□□□□ -1.22
COPS4-203ENST00000504274 PFKLP17858 780 aa7.42□□□□□ -1.22
COPS4-203ENST00000504274 PI3P19957 117 aa7.42□□□□□ -1.22
COPS4-203ENST00000504274 FOXO4P98177 505 aa7.42□□□□□ -1.22
COPS4-203ENST00000504274 CRY1Q16526 586 aa7.42□□□□□ -1.22
COPS4-203ENST00000504274 CR1LQ2VPA4 569 aa7.42□□□□□ -1.22
COPS4-203ENST00000504274 TMEM177Q53S58 311 aa7.42□□□□□ -1.22
COPS4-203ENST00000504274 ZCCHC8Q6NZY4 707 aaKnown RBP7.42□□□□□ -1.22
COPS4-203ENST00000504274 B3GNT8Q7Z7M8 397 aa7.42□□□□□ -1.22
COPS4-203ENST00000504274 SMARCC2Q8TAQ2 1214 aa7.42□□□□□ -1.22
COPS4-203ENST00000504274 SAMD15Q9P1V8 674 aa7.42□□□□□ -1.22
COPS4-203ENST00000504274 MAGEC2Q9UBF1 373 aaPredicted RBP7.42□□□□□ -1.22
COPS4-203ENST00000504274 SRPK3Q9UPE1 567 aa7.42□□□□□ -1.22
COPS4-203ENST00000504274 IRAK3Q9Y616 596 aa7.42□□□□□ -1.22
COPS4-203ENST00000504274 M0R2C6 588 aa7.41□□□□□ -1.22
COPS4-203ENST00000504274 GSTA4O15217 222 aa7.41□□□□□ -1.22
COPS4-203ENST00000504274 MAFKO60675 156 aa7.41□□□□□ -1.22
COPS4-203ENST00000504274 LRG1P02750 347 aa7.41□□□□□ -1.22
COPS4-203ENST00000504274 EPHA5P54756 1037 aa7.41□□□□□ -1.22
COPS4-203ENST00000504274 CD300LDQ6UXZ3 194 aa7.41□□□□□ -1.22
COPS4-203ENST00000504274 KCTD1Q719H9 257 aa7.41□□□□□ -1.22
COPS4-203ENST00000504274 DDX11Q96FC9 970 aa7.41□□□□□ -1.22
COPS4-203ENST00000504274 NOX5Q96PH1 765 aa7.41□□□□□ -1.22
COPS4-203ENST00000504274 RBPJLQ9UBG7 517 aa7.41□□□□□ -1.22
COPS4-203ENST00000504274 WASF3Q9UPY6 502 aa7.41□□□□□ -1.22
COPS4-203ENST00000504274 KCTD3Q9Y597 815 aa7.41□□□□□ -1.22
COPS4-203ENST00000504274 FAM90A27PA6NNH2 459 aa7.4□□□□□ -1.22
COPS4-203ENST00000504274 ACOT7O00154 380 aa7.4□□□□□ -1.22
COPS4-203ENST00000504274 PLA2G1BP04054 148 aaKnown RBP7.4□□□□□ -1.22
COPS4-203ENST00000504274 JMJD7P0C870 316 aa7.4□□□□□ -1.22
COPS4-203ENST00000504274 LINC00310P59036 64 aa7.4□□□□□ -1.22
COPS4-203ENST00000504274 SEC23AQ15436 765 aa7.4□□□□□ -1.22
COPS4-203ENST00000504274 KCNA10Q16322 511 aa7.4□□□□□ -1.22
COPS4-203ENST00000504274 PKN1Q16512 942 aa7.4□□□□□ -1.22
COPS4-203ENST00000504274 TM4SF20Q53R12 229 aa7.4□□□□□ -1.22
COPS4-203ENST00000504274 PIK3R6Q5UE93 754 aa7.4□□□□□ -1.22
COPS4-203ENST00000504274 CDCA2Q69YH5 1023 aaPredicted RBP7.4□□□□□ -1.22
COPS4-203ENST00000504274 CNNM4Q6P4Q7 775 aa7.4□□□□□ -1.22
COPS4-203ENST00000504274 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.4□□□□□ -1.22
COPS4-203ENST00000504274 FAM129CQ86XR2 697 aa7.4□□□□□ -1.22
COPS4-203ENST00000504274 TRIM48Q8IWZ4 208 aa7.4□□□□□ -1.22
COPS4-203ENST00000504274 MFSD3Q96ES6 412 aa7.4□□□□□ -1.22
COPS4-203ENST00000504274 TOE1Q96GM8 510 aaKnown RBP7.4□□□□□ -1.22
COPS4-203ENST00000504274 YIPF4Q9BSR8 244 aa7.4□□□□□ -1.22
COPS4-203ENST00000504274 INTS7Q9NVH2 962 aaKnown RBP7.4□□□□□ -1.22
COPS4-203ENST00000504274 DTLQ9NZJ0 730 aa7.4□□□□□ -1.22
COPS4-203ENST00000504274 CNOT6Q9ULM6 557 aaKnown RBP7.4□□□□□ -1.22
COPS4-203ENST00000504274 FAN1Q9Y2M0 1017 aa7.4□□□□□ -1.22
COPS4-203ENST00000504274 B4E1Z4 1266 aa7.39□□□□□ -1.23
COPS4-203ENST00000504274 TRAF5O00463 557 aa7.39□□□□□ -1.23
COPS4-203ENST00000504274 MECP2P51608 486 aaKnown RBP7.39□□□□□ -1.23
COPS4-203ENST00000504274 EGFLAMQ63HQ2 1017 aa7.39□□□□□ -1.23
COPS4-203ENST00000504274 TEPPQ6URK8 271 aa7.39□□□□□ -1.23
COPS4-203ENST00000504274 DDX53Q86TM3 631 aaKnown RBP7.39□□□□□ -1.23
COPS4-203ENST00000504274 STK32CQ86UX6 486 aa7.39□□□□□ -1.23
COPS4-203ENST00000504274 LRRTM3Q86VH5 581 aa7.39□□□□□ -1.23
COPS4-203ENST00000504274 TTLL11Q8NHH1 800 aa7.39□□□□□ -1.23
COPS4-203ENST00000504274 DDX1Q92499 740 aaKnown RBP7.39□□□□□ -1.23
COPS4-203ENST00000504274 GORASP1Q9BQQ3 440 aa7.39□□□□□ -1.23
COPS4-203ENST00000504274 TARS2Q9BW92 718 aaKnown RBP7.39□□□□□ -1.23
COPS4-203ENST00000504274 PDGFDQ9GZP0 370 aaPredicted RBP7.39□□□□□ -1.23
COPS4-203ENST00000504274 MTFR1LQ9H019 292 aa7.39□□□□□ -1.23
COPS4-203ENST00000504274 PLAAQ9Y263 795 aa7.39□□□□□ -1.23
COPS4-203ENST00000504274 CADPSQ9ULU8 1353 aa7.38□□□□□ -1.23
COPS4-203ENST00000504274 A0A087X0B3 334 aa7.38□□□□□ -1.23
COPS4-203ENST00000504274 NPTXRO95502 500 aa7.38□□□□□ -1.23
COPS4-203ENST00000504274 APPP05067 770 aa7.38□□□□□ -1.23
COPS4-203ENST00000504274 PCBP1Q15365 356 aaKnown RBP eCLIP7.38□□□□□ -1.23
COPS4-203ENST00000504274 CFAP100Q494V2 611 aa7.38□□□□□ -1.23
COPS4-203ENST00000504274 PAN2Q504Q3 1202 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms