RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 ZNF618Q5T7W0 954 aa18.7■□□□□ 0.58
SCLT1-204ENST00000503215 METTL7BQ6UX53 244 aa18.7■□□□□ 0.58
SCLT1-204ENST00000503215 HEATR3Q7Z4Q2 680 aa18.7■□□□□ 0.58
SCLT1-204ENST00000503215 GPR20Q99678 358 aa18.7■□□□□ 0.58
SCLT1-204ENST00000503215 SLC28A3Q9HAS3 691 aa18.7■□□□□ 0.58
SCLT1-204ENST00000503215 PRDM6Q9NQX0 595 aa18.7■□□□□ 0.58
SCLT1-204ENST00000503215 PCDHA11Q9Y5I1 949 aa18.7■□□□□ 0.58
SCLT1-204ENST00000503215 DOCK5Q9H7D0 1870 aa18.7■□□□□ 0.58
SCLT1-204ENST00000503215 H3BRB1 525 aa18.69■□□□□ 0.58
SCLT1-204ENST00000503215 STAM2O75886 525 aa18.69■□□□□ 0.58
SCLT1-204ENST00000503215 ACTN1P12814 892 aa18.69■□□□□ 0.58
SCLT1-204ENST00000503215 ITGB5P18084 799 aa18.69■□□□□ 0.58
SCLT1-204ENST00000503215 RBL2Q08999 1139 aa18.69■□□□□ 0.58
SCLT1-204ENST00000503215 PTK7Q13308 1070 aa18.69■□□□□ 0.58
SCLT1-204ENST00000503215 WWC2Q6AWC2 1192 aa18.69■□□□□ 0.58
SCLT1-204ENST00000503215 PPM1EQ8WY54 764 aa18.69■□□□□ 0.58
SCLT1-204ENST00000503215 CCDC136Q96JN2 1154 aa18.69■□□□□ 0.58
SCLT1-204ENST00000503215 COL25A1Q9BXS0 654 aaPredicted RBP18.69■□□□□ 0.58
SCLT1-204ENST00000503215 OSBPL7Q9BZF2 842 aa18.69■□□□□ 0.58
SCLT1-204ENST00000503215 TUT1Q9H6E5 874 aaKnown RBP18.69■□□□□ 0.58
SCLT1-204ENST00000503215 CNTNAP5Q8WYK1 1306 aa18.69■□□□□ 0.58
SCLT1-204ENST00000503215 TANC1Q9C0D5 1861 aa18.69■□□□□ 0.58
SCLT1-204ENST00000503215 RFXAPO00287 272 aa18.68■□□□□ 0.58
SCLT1-204ENST00000503215 NOP56O00567 594 aaKnown RBP18.68■□□□□ 0.58
SCLT1-204ENST00000503215 SMIM10L2AP0DMW4 78 aa18.68■□□□□ 0.58
SCLT1-204ENST00000503215 SMIM10L2BP0DMW5 78 aa18.68■□□□□ 0.58
SCLT1-204ENST00000503215 CDC27P30260 824 aa18.68■□□□□ 0.58
SCLT1-204ENST00000503215 NEDD9Q14511 834 aa18.68■□□□□ 0.58
SCLT1-204ENST00000503215 UTP14CQ5TAP6 766 aaKnown RBP18.68■□□□□ 0.58
SCLT1-204ENST00000503215 SYNE3Q6ZMZ3 975 aa18.68■□□□□ 0.58
SCLT1-204ENST00000503215 CCDC155Q8N6L0 562 aa18.68■□□□□ 0.58
SCLT1-204ENST00000503215 RNPEPQ9H4A4 650 aa18.68■□□□□ 0.58
SCLT1-204ENST00000503215 CERS4Q9HA82 394 aa18.68■□□□□ 0.58
SCLT1-204ENST00000503215 PKD2L1Q9P0L9 805 aa18.68■□□□□ 0.58
SCLT1-204ENST00000503215 PCDHA6Q9UN73 950 aa18.68■□□□□ 0.58
SCLT1-204ENST00000503215 PCDHA8Q9Y5H6 950 aa18.68■□□□□ 0.58
SCLT1-204ENST00000503215 V9GY48 417 aaPredicted RBP18.68■□□□□ 0.58
SCLT1-204ENST00000503215 VCANP13611 3396 aa18.68■□□□□ 0.58
SCLT1-204ENST00000503215 KLF18A0A0U1RQI7 1052 aa18.68■□□□□ 0.58
SCLT1-204ENST00000503215 TREHO43280 583 aa18.68■□□□□ 0.58
SCLT1-204ENST00000503215 ZBTB43O43298 467 aa18.68■□□□□ 0.58
SCLT1-204ENST00000503215 CXCL10P02778 98 aa18.68■□□□□ 0.58
SCLT1-204ENST00000503215 CA3P07451 260 aa18.68■□□□□ 0.58
SCLT1-204ENST00000503215 RTN1Q16799 776 aa18.68■□□□□ 0.58
SCLT1-204ENST00000503215 PPP2R2DQ66LE6 453 aa18.68■□□□□ 0.58
SCLT1-204ENST00000503215 XRRA1Q6P2D8 792 aa18.68■□□□□ 0.58
SCLT1-204ENST00000503215 SPRED2Q7Z698 418 aa18.68■□□□□ 0.58
SCLT1-204ENST00000503215 SERINC5Q86VE9 423 aa18.68■□□□□ 0.58
SCLT1-204ENST00000503215 HERC6Q8IVU3 1022 aa18.68■□□□□ 0.58
SCLT1-204ENST00000503215 KCNB2Q92953 911 aa18.68■□□□□ 0.58
SCLT1-204ENST00000503215 PGBD1Q96JS3 809 aa18.68■□□□□ 0.58
SCLT1-204ENST00000503215 UBIAD1Q9Y5Z9 338 aa18.68■□□□□ 0.58
SCLT1-204ENST00000503215 EPOPA6NHQ4 379 aa18.67■□□□□ 0.58
SCLT1-204ENST00000503215 KCNA2P16389 499 aa18.67■□□□□ 0.58
SCLT1-204ENST00000503215 IGFBP4P22692 258 aa18.67■□□□□ 0.58
SCLT1-204ENST00000503215 HOXC8P31273 242 aa18.67■□□□□ 0.58
SCLT1-204ENST00000503215 WDR5P61964 334 aaKnown RBP18.67■□□□□ 0.58
SCLT1-204ENST00000503215 DEFB103AP81534 67 aa18.67■□□□□ 0.58
SCLT1-204ENST00000503215 CCDC85BQ15834 202 aaPredicted RBP18.67■□□□□ 0.58
SCLT1-204ENST00000503215 ATP6V0A1Q93050 837 aa18.67■□□□□ 0.58
SCLT1-204ENST00000503215 GAS2L1Q99501 681 aaPredicted RBP18.67■□□□□ 0.58
SCLT1-204ENST00000503215 SENP7Q9BQF6 1050 aa18.67■□□□□ 0.58
SCLT1-204ENST00000503215 SETD4Q9NVD3 440 aa18.67■□□□□ 0.58
SCLT1-204ENST00000503215 C17orf102A2RUQ5 167 aa18.66■□□□□ 0.58
SCLT1-204ENST00000503215 GOLGA8AA7E2F4 631 aa18.66■□□□□ 0.58
SCLT1-204ENST00000503215 GOLGA8BA8MQT2 603 aa18.66■□□□□ 0.58
SCLT1-204ENST00000503215 ADAMTS3O15072 1205 aa18.66■□□□□ 0.58
SCLT1-204ENST00000503215 THPOP40225 353 aa18.66■□□□□ 0.58
SCLT1-204ENST00000503215 APOBRQ0VD83 1088 aa18.66■□□□□ 0.58
SCLT1-204ENST00000503215 NLRX1Q86UT6 975 aa18.66■□□□□ 0.58
SCLT1-204ENST00000503215 CYP2W1Q8TAV3 490 aa18.66■□□□□ 0.58
SCLT1-204ENST00000503215 PHOSPHO2Q8TCD6 241 aa18.66■□□□□ 0.58
SCLT1-204ENST00000503215 SLC9A7Q96T83 725 aa18.66■□□□□ 0.58
SCLT1-204ENST00000503215 USP26Q9BXU7 913 aa18.66■□□□□ 0.58
SCLT1-204ENST00000503215 RBM28Q9NW13 759 aaKnown RBP18.66■□□□□ 0.58
SCLT1-204ENST00000503215 NAP1L2Q9ULW6 460 aaPredicted RBP18.66■□□□□ 0.58
SCLT1-204ENST00000503215 SNX14Q9Y5W7 946 aa18.66■□□□□ 0.58
SCLT1-204ENST00000503215 GSTTP1A0A1W2PQM5 241 aa18.65■□□□□ 0.58
SCLT1-204ENST00000503215 STXBP3O00186 592 aa18.65■□□□□ 0.58
SCLT1-204ENST00000503215 ADD1P35611 737 aaKnown RBP18.65■□□□□ 0.58
SCLT1-204ENST00000503215 TAP1Q03518 808 aa18.65■□□□□ 0.58
SCLT1-204ENST00000503215 KRT32Q14532 448 aa18.65■□□□□ 0.58
SCLT1-204ENST00000503215 CNKSR3Q6P9H4 555 aa18.65■□□□□ 0.58
SCLT1-204ENST00000503215 GPRASP2Q96D09 838 aa18.65■□□□□ 0.58
SCLT1-204ENST00000503215 JAKMIP1Q96N16 626 aaKnown RBP18.65■□□□□ 0.58
SCLT1-204ENST00000503215 TMEM260Q9NX78 707 aa18.65■□□□□ 0.58
SCLT1-204ENST00000503215 LCHNA4D1U4 455 aa18.64■□□□□ 0.57
SCLT1-204ENST00000503215 SPDYE3A6NKU9 549 aa18.64■□□□□ 0.57
SCLT1-204ENST00000503215 BAIAP3O94812 1187 aa18.64■□□□□ 0.57
SCLT1-204ENST00000503215 HSPA4P34932 840 aa18.64■□□□□ 0.57
SCLT1-204ENST00000503215 NAPAP54920 295 aa18.64■□□□□ 0.57
SCLT1-204ENST00000503215 Q6ZUG5 572 aa18.64■□□□□ 0.57
SCLT1-204ENST00000503215 RIC8AQ9NPQ8 531 aa18.64■□□□□ 0.57
SCLT1-204ENST00000503215 JADE2Q9NQC1 790 aa18.64■□□□□ 0.57
SCLT1-204ENST00000503215 PTPRSQ13332 1948 aa18.63■□□□□ 0.57
SCLT1-204ENST00000503215 RSPH10B2B2RC85 870 aa18.63■□□□□ 0.57
SCLT1-204ENST00000503215 RSPH10BP0C881 870 aa18.63■□□□□ 0.57
SCLT1-204ENST00000503215 TCF7P36402 384 aaPredicted RBP18.63■□□□□ 0.57
SCLT1-204ENST00000503215 ADAM17P78536 824 aa18.63■□□□□ 0.57
SCLT1-204ENST00000503215 KRT40Q6A162 431 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms