RNA–Protein interactions for RNA: ENST00000503121.5

SYNE4-206, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-206ENST00000503121 C16orf59Q7L2K0 433 aa13.75□□□□□ -0.21
SYNE4-206ENST00000503121 SESTD1Q86VW0 696 aa13.75□□□□□ -0.21
SYNE4-206ENST00000503121 TRIM22Q8IYM9 498 aa13.75□□□□□ -0.21
SYNE4-206ENST00000503121 RPUSD2Q8IZ73 545 aaKnown RBP13.75□□□□□ -0.21
SYNE4-206ENST00000503121 SCLYQ96I15 445 aa13.75□□□□□ -0.21
SYNE4-206ENST00000503121 ANO3Q9BYT9 981 aa13.75□□□□□ -0.21
SYNE4-206ENST00000503121 IL23AQ9NPF7 189 aa13.75□□□□□ -0.21
SYNE4-206ENST00000503121 JADE2Q9NQC1 790 aa13.75□□□□□ -0.21
SYNE4-206ENST00000503121 HDAC6Q9UBN7 1215 aa13.75□□□□□ -0.21
SYNE4-206ENST00000503121 UBIAD1Q9Y5Z9 338 aa13.75□□□□□ -0.21
SYNE4-206ENST00000503121 H3BRB1 525 aa13.74□□□□□ -0.21
SYNE4-206ENST00000503121 HAS3O00219 553 aa13.74□□□□□ -0.21
SYNE4-206ENST00000503121 MAFGO15525 162 aa13.74□□□□□ -0.21
SYNE4-206ENST00000503121 ATP9AO75110 1047 aa13.74□□□□□ -0.21
SYNE4-206ENST00000503121 FGBP02675 491 aa13.74□□□□□ -0.21
SYNE4-206ENST00000503121 LGALS2P05162 132 aa13.74□□□□□ -0.21
SYNE4-206ENST00000503121 GNA11P29992 359 aa13.74□□□□□ -0.21
SYNE4-206ENST00000503121 SSRP1Q08945 709 aaKnown RBP13.74□□□□□ -0.21
SYNE4-206ENST00000503121 BFSP2Q13515 415 aa13.74□□□□□ -0.21
SYNE4-206ENST00000503121 TMEM240Q5SV17 173 aa13.74□□□□□ -0.21
SYNE4-206ENST00000503121 UTP14CQ5TAP6 766 aaKnown RBP13.74□□□□□ -0.21
SYNE4-206ENST00000503121 DEFB123Q8N688 67 aa13.74□□□□□ -0.21
SYNE4-206ENST00000503121 GPR20Q99678 358 aa13.74□□□□□ -0.21
SYNE4-206ENST00000503121 MXRA8Q9BRK3 442 aa13.74□□□□□ -0.21
SYNE4-206ENST00000503121 C16orf70Q9BSU1 422 aa13.74□□□□□ -0.21
SYNE4-206ENST00000503121 ZMYND12Q9H0C1 365 aa13.74□□□□□ -0.21
SYNE4-206ENST00000503121 WNT8AQ9H1J5 351 aa13.74□□□□□ -0.21
SYNE4-206ENST00000503121 TUT1Q9H6E5 874 aaKnown RBP13.74□□□□□ -0.21
SYNE4-206ENST00000503121 GTF2IRD1Q9UHL9 959 aa13.74□□□□□ -0.21
SYNE4-206ENST00000503121 ESYT2A0FGR8 921 aa13.73□□□□□ -0.21
SYNE4-206ENST00000503121 KCNA2P16389 499 aa13.73□□□□□ -0.21
SYNE4-206ENST00000503121 CLK2P49760 499 aaKnown RBP13.73□□□□□ -0.21
SYNE4-206ENST00000503121 MCTP2Q6DN12 878 aa13.73□□□□□ -0.21
SYNE4-206ENST00000503121 Q7L0L9 218 aa13.73□□□□□ -0.21
SYNE4-206ENST00000503121 DEFB128Q7Z7B8 93 aa13.73□□□□□ -0.21
SYNE4-206ENST00000503121 REXO1Q8N1G1 1221 aaKnown RBP13.73□□□□□ -0.21
SYNE4-206ENST00000503121 CCDC155Q8N6L0 562 aa13.73□□□□□ -0.21
SYNE4-206ENST00000503121 CCDC148Q8NFR7 591 aa13.73□□□□□ -0.21
SYNE4-206ENST00000503121 CYP2W1Q8TAV3 490 aa13.73□□□□□ -0.21
SYNE4-206ENST00000503121 BICD2Q8TD16 824 aa13.73□□□□□ -0.21
SYNE4-206ENST00000503121 SLKQ9H2G2 1235 aaPredicted RBP13.73□□□□□ -0.21
SYNE4-206ENST00000503121 MTIF3Q9H2K0 278 aaKnown RBP13.73□□□□□ -0.21
SYNE4-206ENST00000503121 KCNH7Q9NS40 1196 aa13.73□□□□□ -0.21
SYNE4-206ENST00000503121 VPS54Q9P1Q0 977 aa13.73□□□□□ -0.21
SYNE4-206ENST00000503121 TELO2Q9Y4R8 837 aa13.73□□□□□ -0.21
SYNE4-206ENST00000503121 PITPNM1O00562 1244 aa13.72□□□□□ -0.21
SYNE4-206ENST00000503121 SEC24BO95487 1268 aa13.72□□□□□ -0.21
SYNE4-206ENST00000503121 IQCF3P0C7M6 154 aa13.72□□□□□ -0.21
SYNE4-206ENST00000503121 SREBF1P36956 1147 aa13.72□□□□□ -0.21
SYNE4-206ENST00000503121 NLRP5P59047 1200 aa13.72□□□□□ -0.21
SYNE4-206ENST00000503121 SMAD3P84022 425 aaKnown RBP13.72□□□□□ -0.21
SYNE4-206ENST00000503121 ZNF200P98182 395 aaPredicted RBP13.72□□□□□ -0.21
SYNE4-206ENST00000503121 ANKRD1Q15327 319 aa13.72□□□□□ -0.21
SYNE4-206ENST00000503121 CEP55Q53EZ4 464 aa13.72□□□□□ -0.21
SYNE4-206ENST00000503121 OTOP2Q7RTS6 562 aa13.72□□□□□ -0.21
SYNE4-206ENST00000503121 CAGE1Q8TC20 777 aa13.72□□□□□ -0.21
SYNE4-206ENST00000503121 SEPT1Q8WYJ6 367 aa13.72□□□□□ -0.21
SYNE4-206ENST00000503121 ZNF215Q9UL58 517 aaPredicted RBP13.72□□□□□ -0.21
SYNE4-206ENST00000503121 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.71□□□□□ -0.21
SYNE4-206ENST00000503121 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.71□□□□□ -0.21
SYNE4-206ENST00000503121 C17orf102A2RUQ5 167 aa13.71□□□□□ -0.21
SYNE4-206ENST00000503121 PFKMP08237 780 aa13.71□□□□□ -0.21
SYNE4-206ENST00000503121 SMIM10L2AP0DMW4 78 aa13.71□□□□□ -0.21
SYNE4-206ENST00000503121 SMIM10L2BP0DMW5 78 aa13.71□□□□□ -0.21
SYNE4-206ENST00000503121 ARP10275 920 aa13.71□□□□□ -0.21
SYNE4-206ENST00000503121 TCF7P36402 384 aaPredicted RBP13.71□□□□□ -0.21
SYNE4-206ENST00000503121 ARHGAP4P98171 946 aa13.71□□□□□ -0.21
SYNE4-206ENST00000503121 TRIM50Q86XT4 487 aa13.71□□□□□ -0.21
SYNE4-206ENST00000503121 CTAGE1Q96RT6 745 aa13.71□□□□□ -0.21
SYNE4-206ENST00000503121 SDF4Q9BRK5 362 aa13.71□□□□□ -0.21
SYNE4-206ENST00000503121 FTOQ9C0B1 505 aaKnown RBP eCLIP13.71□□□□□ -0.21
SYNE4-206ENST00000503121 JPH1Q9HDC5 661 aaPredicted RBP13.71□□□□□ -0.21
SYNE4-206ENST00000503121 SH3GLB2Q9NR46 395 aa13.71□□□□□ -0.21
SYNE4-206ENST00000503121 TPCN1Q9ULQ1 816 aa13.71□□□□□ -0.21
SYNE4-206ENST00000503121 ZBBXA8MT70 800 aa13.7□□□□□ -0.22
SYNE4-206ENST00000503121 MEIS1O00470 390 aa13.7□□□□□ -0.22
SYNE4-206ENST00000503121 ADAMTS3O15072 1205 aa13.7□□□□□ -0.22
SYNE4-206ENST00000503121 CDKL5O76039 1030 aa13.7□□□□□ -0.22
SYNE4-206ENST00000503121 DEXIO95424 95 aa13.7□□□□□ -0.22
SYNE4-206ENST00000503121 RFC2P35250 354 aa13.7□□□□□ -0.22
SYNE4-206ENST00000503121 NEK4P51957 841 aa13.7□□□□□ -0.22
SYNE4-206ENST00000503121 AK2P54819 239 aa13.7□□□□□ -0.22
SYNE4-206ENST00000503121 SCRN1Q12765 414 aa13.7□□□□□ -0.22
SYNE4-206ENST00000503121 PTK7Q13308 1070 aa13.7□□□□□ -0.22
SYNE4-206ENST00000503121 ZNF697Q5TEC3 545 aa13.7□□□□□ -0.22
SYNE4-206ENST00000503121 PLA2G4DQ86XP0 818 aa13.7□□□□□ -0.22
SYNE4-206ENST00000503121 RASGRP4Q8TDF6 673 aa13.7□□□□□ -0.22
SYNE4-206ENST00000503121 AFAP1L1Q8TED9 768 aa13.7□□□□□ -0.22
SYNE4-206ENST00000503121 HERVK_113Q902F9 699 aa13.7□□□□□ -0.22
SYNE4-206ENST00000503121 GLG1Q92896 1179 aa13.7□□□□□ -0.22
SYNE4-206ENST00000503121 ATP6V0A1Q93050 837 aa13.7□□□□□ -0.22
SYNE4-206ENST00000503121 FAM161BQ96MY7 647 aa13.7□□□□□ -0.22
SYNE4-206ENST00000503121 RNPEPQ9H4A4 650 aa13.7□□□□□ -0.22
SYNE4-206ENST00000503121 AGO4Q9HCK5 861 aaKnown RBP13.7□□□□□ -0.22
SYNE4-206ENST00000503121 SLC9A2Q9UBY0 812 aa13.7□□□□□ -0.22
SYNE4-206ENST00000503121 GSTTP1A0A1W2PQM5 241 aa13.69□□□□□ -0.22
SYNE4-206ENST00000503121 FAM86B1E9PN63 330 aa13.69□□□□□ -0.22
SYNE4-206ENST00000503121 PFKFB2O60825 505 aa13.69□□□□□ -0.22
SYNE4-206ENST00000503121 CYP3A4P08684 503 aa13.69□□□□□ -0.22
SYNE4-206ENST00000503121 FAM86B2P0C5J1 330 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 181.6 ms