RNA–Protein interactions for RNA: ENST00000502840.5

CDC42SE2-205, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-205ENST00000502840 MASP1P48740 699 aa4.08□□□□□ -1.76
CDC42SE2-205ENST00000502840 SUMO1P63165 101 aaKnown RBP4.08□□□□□ -1.76
CDC42SE2-205ENST00000502840 HTRA3P83110 453 aa4.08□□□□□ -1.76
CDC42SE2-205ENST00000502840 PABPC4Q13310 644 aaKnown RBP eCLIP4.08□□□□□ -1.76
CDC42SE2-205ENST00000502840 TCEA2Q15560 299 aa4.08□□□□□ -1.76
CDC42SE2-205ENST00000502840 INF2Q27J81 1249 aa4.08□□□□□ -1.76
CDC42SE2-205ENST00000502840 VMACQ2NL98 169 aa4.08□□□□□ -1.76
CDC42SE2-205ENST00000502840 WWC2Q6AWC2 1192 aa4.08□□□□□ -1.76
CDC42SE2-205ENST00000502840 NSMFQ6X4W1 530 aa4.08□□□□□ -1.76
CDC42SE2-205ENST00000502840 CABP7Q86V35 215 aa4.08□□□□□ -1.76
CDC42SE2-205ENST00000502840 SCUBE1Q8IWY4 988 aa4.08□□□□□ -1.76
CDC42SE2-205ENST00000502840 RPUSD2Q8IZ73 545 aaKnown RBP4.08□□□□□ -1.76
CDC42SE2-205ENST00000502840 LINC01356Q8N9X3 169 aa4.08□□□□□ -1.76
CDC42SE2-205ENST00000502840 TP53I13Q8NBR0 393 aaPredicted RBP4.08□□□□□ -1.76
CDC42SE2-205ENST00000502840 TOPBP1Q92547 1522 aa4.08□□□□□ -1.76
CDC42SE2-205ENST00000502840 NINJ1Q92982 152 aa4.08□□□□□ -1.76
CDC42SE2-205ENST00000502840 SCLYQ96I15 445 aa4.08□□□□□ -1.76
CDC42SE2-205ENST00000502840 PWWP2AQ96N64 755 aa4.08□□□□□ -1.76
CDC42SE2-205ENST00000502840 IPO9Q96P70 1041 aaKnown RBP4.08□□□□□ -1.76
CDC42SE2-205ENST00000502840 MRPL4Q9BYD3 311 aaKnown RBP4.08□□□□□ -1.76
CDC42SE2-205ENST00000502840 FAM126AQ9BYI3 521 aaPredicted RBP4.08□□□□□ -1.76
CDC42SE2-205ENST00000502840 RNF38Q9H0F5 515 aa4.08□□□□□ -1.76
CDC42SE2-205ENST00000502840 SLC52A2Q9HAB3 445 aa4.08□□□□□ -1.76
CDC42SE2-205ENST00000502840 CYP26B1Q9NR63 512 aa4.08□□□□□ -1.76
CDC42SE2-205ENST00000502840 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.08□□□□□ -1.76
CDC42SE2-205ENST00000502840 CFDP1Q9UEE9 299 aaPredicted RBP4.08□□□□□ -1.76
CDC42SE2-205ENST00000502840 TMEFF2Q9UIK5 374 aaPredicted RBP4.08□□□□□ -1.76
CDC42SE2-205ENST00000502840 PLAAQ9Y263 795 aa4.08□□□□□ -1.76
CDC42SE2-205ENST00000502840 GAPVD1Q14C86 1478 aa4.07□□□□□ -1.76
CDC42SE2-205ENST00000502840 ZNF644Q9H582 1327 aaPredicted RBP4.07□□□□□ -1.76
CDC42SE2-205ENST00000502840 CCDC163A0A0D9SF12 145 aa4.07□□□□□ -1.76
CDC42SE2-205ENST00000502840 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.07□□□□□ -1.76
CDC42SE2-205ENST00000502840 GSG1L2A8MUP6 293 aa4.07□□□□□ -1.76
CDC42SE2-205ENST00000502840 FFAR3O14843 346 aa4.07□□□□□ -1.76
CDC42SE2-205ENST00000502840 CLSTN1O94985 981 aa4.07□□□□□ -1.76
CDC42SE2-205ENST00000502840 ASGR2P07307 311 aa4.07□□□□□ -1.76
CDC42SE2-205ENST00000502840 SNRPB2P08579 225 aaKnown RBP4.07□□□□□ -1.76
CDC42SE2-205ENST00000502840 NCAM1P13591 858 aa4.07□□□□□ -1.76
CDC42SE2-205ENST00000502840 MC3RP41968 323 aa4.07□□□□□ -1.76
CDC42SE2-205ENST00000502840 KCNJ6P48051 423 aa4.07□□□□□ -1.76
CDC42SE2-205ENST00000502840 AMPD3Q01432 767 aa4.07□□□□□ -1.76
CDC42SE2-205ENST00000502840 TARBP2Q15633 366 aaKnown RBP4.07□□□□□ -1.76
CDC42SE2-205ENST00000502840 C21orf62-AS1Q17RA5 79 aa4.07□□□□□ -1.76
CDC42SE2-205ENST00000502840 VWA3BQ502W6 1294 aa4.07□□□□□ -1.76
CDC42SE2-205ENST00000502840 FNDC3BQ53EP0 1204 aaKnown RBP4.07□□□□□ -1.76
CDC42SE2-205ENST00000502840 ACBD5Q5T8D3 534 aaPredicted RBP4.07□□□□□ -1.76
CDC42SE2-205ENST00000502840 STYK1Q6J9G0 422 aa4.07□□□□□ -1.76
CDC42SE2-205ENST00000502840 FGD2Q7Z6J4 655 aa4.07□□□□□ -1.76
CDC42SE2-205ENST00000502840 PLEKHO2Q8TD55 490 aa4.07□□□□□ -1.76
CDC42SE2-205ENST00000502840 ALG3Q92685 438 aa4.07□□□□□ -1.76
CDC42SE2-205ENST00000502840 DPF3Q92784 378 aa4.07□□□□□ -1.76
CDC42SE2-205ENST00000502840 ANP32EQ9BTT0 268 aa4.07□□□□□ -1.76
CDC42SE2-205ENST00000502840 BRINP2Q9C0B6 783 aa4.07□□□□□ -1.76
CDC42SE2-205ENST00000502840 XYLT2Q9H1B5 865 aa4.07□□□□□ -1.76
CDC42SE2-205ENST00000502840 ZCCHC4Q9H5U6 513 aa4.07□□□□□ -1.76
CDC42SE2-205ENST00000502840 BCAS3Q9H6U6 928 aa4.07□□□□□ -1.76
CDC42SE2-205ENST00000502840 IFT57Q9NWB7 429 aa4.07□□□□□ -1.76
CDC42SE2-205ENST00000502840 DBR1Q9UK59 544 aaKnown RBP4.07□□□□□ -1.76
CDC42SE2-205ENST00000502840 PRKAB1Q9Y478 270 aa4.07□□□□□ -1.76
CDC42SE2-205ENST00000502840 AQRO60306 1485 aaKnown RBP eCLIP4.06□□□□□ -1.76
CDC42SE2-205ENST00000502840 POLA1P09884 1462 aaPredicted RBP4.06□□□□□ -1.76
CDC42SE2-205ENST00000502840 CCDC18Q5T9S5 1454 aa4.06□□□□□ -1.76
CDC42SE2-205ENST00000502840 FGD6Q6ZV73 1430 aa4.06□□□□□ -1.76
CDC42SE2-205ENST00000502840 OTOL1A6NHN0 477 aaPredicted RBP4.06□□□□□ -1.76
CDC42SE2-205ENST00000502840 MSCO60682 206 aa4.06□□□□□ -1.76
CDC42SE2-205ENST00000502840 NTRK1P04629 796 aa4.06□□□□□ -1.76
CDC42SE2-205ENST00000502840 KCNA6P17658 529 aa4.06□□□□□ -1.76
CDC42SE2-205ENST00000502840 PMLP29590 882 aa4.06□□□□□ -1.76
CDC42SE2-205ENST00000502840 HOXC12P31275 282 aa4.06□□□□□ -1.76
CDC42SE2-205ENST00000502840 CTSWP56202 376 aa4.06□□□□□ -1.76
CDC42SE2-205ENST00000502840 FOXO4P98177 505 aa4.06□□□□□ -1.76
CDC42SE2-205ENST00000502840 RGL3Q3MIN7 710 aa4.06□□□□□ -1.76
CDC42SE2-205ENST00000502840 E4F1Q66K89 784 aaPredicted RBP4.06□□□□□ -1.76
CDC42SE2-205ENST00000502840 BRAPQ7Z569 592 aa4.06□□□□□ -1.76
CDC42SE2-205ENST00000502840 RNF180Q86T96 592 aa4.06□□□□□ -1.76
CDC42SE2-205ENST00000502840 NIM1KQ8IY84 436 aa4.06□□□□□ -1.76
CDC42SE2-205ENST00000502840 Q8N1Y9 231 aa4.06□□□□□ -1.76
CDC42SE2-205ENST00000502840 FNIP1Q8TF40 1166 aa4.06□□□□□ -1.76
CDC42SE2-205ENST00000502840 KCTD13Q8WZ19 329 aa4.06□□□□□ -1.76
CDC42SE2-205ENST00000502840 MFSD3Q96ES6 412 aa4.06□□□□□ -1.76
CDC42SE2-205ENST00000502840 PEX11GQ96HA9 241 aa4.06□□□□□ -1.76
CDC42SE2-205ENST00000502840 CCDC140Q96MF4 163 aa4.06□□□□□ -1.76
CDC42SE2-205ENST00000502840 SLKQ9H2G2 1235 aaPredicted RBP4.06□□□□□ -1.76
CDC42SE2-205ENST00000502840 CDIP1Q9H305 208 aa4.06□□□□□ -1.76
CDC42SE2-205ENST00000502840 MARCH2Q9P0N8 246 aa4.06□□□□□ -1.76
CDC42SE2-205ENST00000502840 NUDT5Q9UKK9 219 aa4.06□□□□□ -1.76
CDC42SE2-205ENST00000502840 SIT1Q9Y3P8 196 aa4.06□□□□□ -1.76
CDC42SE2-205ENST00000502840 MAP3K1Q13233 1512 aa4.05□□□□□ -1.76
CDC42SE2-205ENST00000502840 NCOA2Q15596 1464 aa4.05□□□□□ -1.76
CDC42SE2-205ENST00000502840 ZBTB7AO95365 584 aa4.05□□□□□ -1.76
CDC42SE2-205ENST00000502840 CPP00450 1065 aa4.05□□□□□ -1.76
CDC42SE2-205ENST00000502840 FUCA1P04066 466 aa4.05□□□□□ -1.76
CDC42SE2-205ENST00000502840 POU3F2P20265 443 aaPredicted RBP4.05□□□□□ -1.76
CDC42SE2-205ENST00000502840 ECI1P42126 302 aa4.05□□□□□ -1.76
CDC42SE2-205ENST00000502840 RBM10P98175 930 aaKnown RBP4.05□□□□□ -1.76
CDC42SE2-205ENST00000502840 DLX2Q07687 328 aaPredicted RBP4.05□□□□□ -1.76
CDC42SE2-205ENST00000502840 SLC9A5Q14940 896 aa4.05□□□□□ -1.76
CDC42SE2-205ENST00000502840 NBPF8Q3BBV2 869 aa4.05□□□□□ -1.76
CDC42SE2-205ENST00000502840 CCDC184Q52MB2 194 aa4.05□□□□□ -1.76
CDC42SE2-205ENST00000502840 TAF7LQ5H9L4 462 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms