RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 C22orf46C9J442 243 aa6.95□□□□□ -1.3
HMGB1P3-201ENST00000502802 DVL2O14641 736 aa6.95□□□□□ -1.3
HMGB1P3-201ENST00000502802 KCNK3O14649 394 aa6.95□□□□□ -1.3
HMGB1P3-201ENST00000502802 NKRFO15226 690 aaKnown RBP eCLIP6.95□□□□□ -1.3
HMGB1P3-201ENST00000502802 PRPF3O43395 683 aaKnown RBP6.95□□□□□ -1.3
HMGB1P3-201ENST00000502802 FUCA1P04066 466 aa6.95□□□□□ -1.3
HMGB1P3-201ENST00000502802 CT47B1P0C2W7 299 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P3-201ENST00000502802 U2AF1L5P0DN76 240 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P3-201ENST00000502802 RECQLP46063 649 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P3-201ENST00000502802 SMAD3P84022 425 aaKnown RBP6.95□□□□□ -1.3
HMGB1P3-201ENST00000502802 U2AF1Q01081 240 aaKnown RBP eCLIP6.95□□□□□ -1.3
HMGB1P3-201ENST00000502802 PCBP2Q15366 365 aaKnown RBP eCLIP6.95□□□□□ -1.3
HMGB1P3-201ENST00000502802 SMAD2Q15796 467 aaKnown RBP6.95□□□□□ -1.3
HMGB1P3-201ENST00000502802 GFOD2Q3B7J2 385 aa6.95□□□□□ -1.3
HMGB1P3-201ENST00000502802 GPR158Q5T848 1215 aa6.95□□□□□ -1.3
HMGB1P3-201ENST00000502802 CXorf57Q6NSI4 855 aaKnown RBP6.95□□□□□ -1.3
HMGB1P3-201ENST00000502802 PGM2L1Q6PCE3 622 aa6.95□□□□□ -1.3
HMGB1P3-201ENST00000502802 EP400NLQ6ZTU2 488 aa6.95□□□□□ -1.3
HMGB1P3-201ENST00000502802 PNMA8AQ86V59 439 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P3-201ENST00000502802 PTRH1Q86Y79 214 aaKnown RBP6.95□□□□□ -1.3
HMGB1P3-201ENST00000502802 NLGN2Q8NFZ4 835 aa6.95□□□□□ -1.3
HMGB1P3-201ENST00000502802 MAP6Q96JE9 813 aa6.95□□□□□ -1.3
HMGB1P3-201ENST00000502802 TOMM22Q9NS69 142 aa6.95□□□□□ -1.3
HMGB1P3-201ENST00000502802 PIM2Q9P1W9 311 aa6.95□□□□□ -1.3
HMGB1P3-201ENST00000502802 ANKRD6Q9Y2G4 727 aa6.95□□□□□ -1.3
HMGB1P3-201ENST00000502802 A0A1W2PQ45 241 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P3-201ENST00000502802 A0A1W2PQY0 241 aa6.94□□□□□ -1.3
HMGB1P3-201ENST00000502802 FAM181BA6NEQ2 426 aa6.94□□□□□ -1.3
HMGB1P3-201ENST00000502802 PLIN1O60240 522 aa6.94□□□□□ -1.3
HMGB1P3-201ENST00000502802 HIP1RO75146 1068 aa6.94□□□□□ -1.3
HMGB1P3-201ENST00000502802 DGKIO75912 1065 aa6.94□□□□□ -1.3
HMGB1P3-201ENST00000502802 RBP3P10745 1247 aa6.94□□□□□ -1.3
HMGB1P3-201ENST00000502802 CORO7P57737 925 aa6.94□□□□□ -1.3
HMGB1P3-201ENST00000502802 KRT85P78386 507 aa6.94□□□□□ -1.3
HMGB1P3-201ENST00000502802 PRKCQQ04759 706 aa6.94□□□□□ -1.3
HMGB1P3-201ENST00000502802 AOC3Q16853 763 aa6.94□□□□□ -1.3
HMGB1P3-201ENST00000502802 MROH9Q5TGP6 573 aa6.94□□□□□ -1.3
HMGB1P3-201ENST00000502802 ANGEL2Q5VTE6 544 aaKnown RBP6.94□□□□□ -1.3
HMGB1P3-201ENST00000502802 NOSTRINQ8IVI9 506 aa6.94□□□□□ -1.3
HMGB1P3-201ENST00000502802 CPA6Q8N4T0 437 aa6.94□□□□□ -1.3
HMGB1P3-201ENST00000502802 ZNF610Q8N9Z0 462 aa6.94□□□□□ -1.3
HMGB1P3-201ENST00000502802 PLEKHO2Q8TD55 490 aa6.94□□□□□ -1.3
HMGB1P3-201ENST00000502802 SH3RF2Q8TEC5 729 aa6.94□□□□□ -1.3
HMGB1P3-201ENST00000502802 PMM1Q92871 262 aa6.94□□□□□ -1.3
HMGB1P3-201ENST00000502802 HHIPL1Q96JK4 782 aa6.94□□□□□ -1.3
HMGB1P3-201ENST00000502802 JMJD8Q96S16 334 aa6.94□□□□□ -1.3
HMGB1P3-201ENST00000502802 ELF4Q99607 663 aaPredicted RBP6.94□□□□□ -1.3
HMGB1P3-201ENST00000502802 G6PC3Q9BUM1 346 aa6.94□□□□□ -1.3
HMGB1P3-201ENST00000502802 PCIF1Q9H4Z3 704 aa6.94□□□□□ -1.3
HMGB1P3-201ENST00000502802 SLC6A20Q9NP91 592 aa6.94□□□□□ -1.3
HMGB1P3-201ENST00000502802 NOC2LQ9Y3T9 749 aaKnown RBP6.94□□□□□ -1.3
HMGB1P3-201ENST00000502802 RWDD3Q9Y3V2 267 aa6.94□□□□□ -1.3
HMGB1P3-201ENST00000502802 MAN2B1O00754 1011 aa6.93□□□□□ -1.3
HMGB1P3-201ENST00000502802 SCDO00767 359 aa6.93□□□□□ -1.3
HMGB1P3-201ENST00000502802 MYL1P05976 194 aa6.93□□□□□ -1.3
HMGB1P3-201ENST00000502802 H2AFB1P0C5Y9 115 aa6.93□□□□□ -1.3
HMGB1P3-201ENST00000502802 H2AFB2P0C5Z0 115 aa6.93□□□□□ -1.3
HMGB1P3-201ENST00000502802 FOSL1P15407 271 aa6.93□□□□□ -1.3
HMGB1P3-201ENST00000502802 KIR2DL1P43626 348 aaPredicted RBP6.93□□□□□ -1.3
HMGB1P3-201ENST00000502802 KIR2DL2P43627 348 aaPredicted RBP6.93□□□□□ -1.3
HMGB1P3-201ENST00000502802 KIF11P52732 1056 aa6.93□□□□□ -1.3
HMGB1P3-201ENST00000502802 SCAND1P57086 179 aa6.93□□□□□ -1.3
HMGB1P3-201ENST00000502802 RHBDL3P58872 404 aa6.93□□□□□ -1.3
HMGB1P3-201ENST00000502802 DUSP4Q13115 394 aa6.93□□□□□ -1.3
HMGB1P3-201ENST00000502802 LRRC32Q14392 662 aa6.93□□□□□ -1.3
HMGB1P3-201ENST00000502802 TMEM240Q5SV17 173 aa6.93□□□□□ -1.3
HMGB1P3-201ENST00000502802 FSTL4Q6MZW2 842 aa6.93□□□□□ -1.3
HMGB1P3-201ENST00000502802 SLCO6A1Q86UG4 719 aa6.93□□□□□ -1.3
HMGB1P3-201ENST00000502802 RIOX2Q8IUF8 465 aa6.93□□□□□ -1.3
HMGB1P3-201ENST00000502802 NLGN4XQ8N0W4 816 aa6.93□□□□□ -1.3
HMGB1P3-201ENST00000502802 PIP4K2CQ8TBX8 421 aa6.93□□□□□ -1.3
HMGB1P3-201ENST00000502802 USP33Q8TEY7 942 aa6.93□□□□□ -1.3
HMGB1P3-201ENST00000502802 LINC01599Q8WXQ3 324 aa6.93□□□□□ -1.3
HMGB1P3-201ENST00000502802 MTA3Q9BTC8 594 aa6.93□□□□□ -1.3
HMGB1P3-201ENST00000502802 MYH16Q9H6N6 1097 aa6.93□□□□□ -1.3
HMGB1P3-201ENST00000502802 ARNT2Q9HBZ2 717 aa6.93□□□□□ -1.3
HMGB1P3-201ENST00000502802 ACSS2Q9NR19 701 aa6.93□□□□□ -1.3
HMGB1P3-201ENST00000502802 TOPORSQ9NS56 1045 aaPredicted RBP6.93□□□□□ -1.3
HMGB1P3-201ENST00000502802 MKS1Q9NXB0 559 aa6.93□□□□□ -1.3
HMGB1P3-201ENST00000502802 VAV3Q9UKW4 847 aa6.93□□□□□ -1.3
HMGB1P3-201ENST00000502802 DSEQ9UL01 958 aa6.93□□□□□ -1.3
HMGB1P3-201ENST00000502802 PNMA8BQ9ULN7 279 aaPredicted RBP6.93□□□□□ -1.3
HMGB1P3-201ENST00000502802 SRPK3Q9UPE1 567 aa6.93□□□□□ -1.3
HMGB1P3-201ENST00000502802 GIT1Q9Y2X7 761 aa6.93□□□□□ -1.3
HMGB1P3-201ENST00000502802 MRFAP1Q9Y605 127 aa6.93□□□□□ -1.3
HMGB1P3-201ENST00000502802 TRIM75PA6NK02 468 aa6.92□□□□□ -1.3
HMGB1P3-201ENST00000502802 GOLGA8AA7E2F4 631 aa6.92□□□□□ -1.3
HMGB1P3-201ENST00000502802 GOLGA8BA8MQT2 603 aa6.92□□□□□ -1.3
HMGB1P3-201ENST00000502802 KRIT1O00522 736 aa6.92□□□□□ -1.3
HMGB1P3-201ENST00000502802 CLASP2O75122 1294 aaKnown RBP6.92□□□□□ -1.3
HMGB1P3-201ENST00000502802 CYP17A1P05093 508 aa6.92□□□□□ -1.3
HMGB1P3-201ENST00000502802 PF4V1P10720 104 aa6.92□□□□□ -1.3
HMGB1P3-201ENST00000502802 TCIRG1Q13488 830 aa6.92□□□□□ -1.3
HMGB1P3-201ENST00000502802 UBE4AQ14139 1066 aa6.92□□□□□ -1.3
HMGB1P3-201ENST00000502802 FIGNQ5HY92 759 aa6.92□□□□□ -1.3
HMGB1P3-201ENST00000502802 SLC51AQ86UW1 340 aa6.92□□□□□ -1.3
HMGB1P3-201ENST00000502802 ZDHHC13Q8IUH4 622 aa6.92□□□□□ -1.3
HMGB1P3-201ENST00000502802 TPH2Q8IWU9 490 aa6.92□□□□□ -1.3
HMGB1P3-201ENST00000502802 CMIPQ8IY22 773 aa6.92□□□□□ -1.3
HMGB1P3-201ENST00000502802 UHMK1Q8TAS1 419 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms