RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 AKR1B10O60218 316 aa18.34■□□□□ 0.53
VCAN-204ENST00000502527 KLRC3Q07444 240 aa18.34■□□□□ 0.53
VCAN-204ENST00000502527 ABCB5Q2M3G0 1257 aa18.34■□□□□ 0.53
VCAN-204ENST00000502527 SHROOM1Q2M3G4 852 aaPredicted RBP18.34■□□□□ 0.53
VCAN-204ENST00000502527 HERC4Q5GLZ8 1057 aaPredicted RBP18.34■□□□□ 0.53
VCAN-204ENST00000502527 PDXDC1Q6P996 788 aa18.34■□□□□ 0.53
VCAN-204ENST00000502527 CACNA2D4Q7Z3S7 1137 aa18.34■□□□□ 0.53
VCAN-204ENST00000502527 KRT26Q7Z3Y9 468 aa18.34■□□□□ 0.53
VCAN-204ENST00000502527 ERMNQ8TAM6 284 aa18.34■□□□□ 0.53
VCAN-204ENST00000502527 CRYGNQ8WXF5 182 aa18.34■□□□□ 0.53
VCAN-204ENST00000502527 BAP1Q92560 729 aa18.34■□□□□ 0.53
VCAN-204ENST00000502527 MMS19Q96T76 1030 aa18.34■□□□□ 0.53
VCAN-204ENST00000502527 NUCKS1Q9H1E3 243 aaKnown RBP18.34■□□□□ 0.53
VCAN-204ENST00000502527 STK24Q9Y6E0 443 aa18.34■□□□□ 0.53
VCAN-204ENST00000502527 MYH7BA7E2Y1 1941 aa18.33■□□□□ 0.53
VCAN-204ENST00000502527 PITPNM2Q9BZ72 1349 aa18.33■□□□□ 0.52
VCAN-204ENST00000502527 PLSCR1O15162 318 aa18.33■□□□□ 0.52
VCAN-204ENST00000502527 TACC1O75410 805 aa18.33■□□□□ 0.52
VCAN-204ENST00000502527 FOSP01100 380 aaPredicted RBP18.33■□□□□ 0.52
VCAN-204ENST00000502527 KRT18P05783 430 aaKnown RBP18.33■□□□□ 0.52
VCAN-204ENST00000502527 CYP11B2P19099 503 aa18.33■□□□□ 0.52
VCAN-204ENST00000502527 MCM3P25205 808 aa18.33■□□□□ 0.52
VCAN-204ENST00000502527 USP14P54578 494 aa18.33■□□□□ 0.52
VCAN-204ENST00000502527 FBXO11Q86XK2 927 aa18.33■□□□□ 0.52
VCAN-204ENST00000502527 TXLNBQ8N3L3 684 aa18.33■□□□□ 0.52
VCAN-204ENST00000502527 SRGAP2O75044 1071 aa18.32■□□□□ 0.52
VCAN-204ENST00000502527 MED24O75448 989 aa18.32■□□□□ 0.52
VCAN-204ENST00000502527 EIF3JO75822 258 aaKnown RBP18.32■□□□□ 0.52
VCAN-204ENST00000502527 Q4G0T1 1027 aa18.32■□□□□ 0.52
VCAN-204ENST00000502527 ETNPPLQ8TBG4 499 aa18.32■□□□□ 0.52
VCAN-204ENST00000502527 UIMC1Q96RL1 719 aa18.32■□□□□ 0.52
VCAN-204ENST00000502527 SH2D4AQ9H788 454 aa18.32■□□□□ 0.52
VCAN-204ENST00000502527 TBC1D7Q9P0N9 293 aa18.32■□□□□ 0.52
VCAN-204ENST00000502527 JRKLQ9Y4A0 524 aa18.32■□□□□ 0.52
VCAN-204ENST00000502527 COL11A2P13942 1736 aaPredicted RBP18.32■□□□□ 0.52
VCAN-204ENST00000502527 EP400Q96L91 3159 aa18.32■□□□□ 0.52
VCAN-204ENST00000502527 FRMD3A2A2Y4 597 aa18.32■□□□□ 0.52
VCAN-204ENST00000502527 NDUFB10O96000 172 aa18.32■□□□□ 0.52
VCAN-204ENST00000502527 STAT3P40763 770 aa18.32■□□□□ 0.52
VCAN-204ENST00000502527 MARSP56192 900 aaKnown RBP18.32■□□□□ 0.52
VCAN-204ENST00000502527 PRR16Q569H4 304 aa18.32■□□□□ 0.52
VCAN-204ENST00000502527 SYDE2Q5VT97 1194 aa18.32■□□□□ 0.52
VCAN-204ENST00000502527 IQCEQ6IPM2 695 aa18.32■□□□□ 0.52
VCAN-204ENST00000502527 STYK1Q6J9G0 422 aa18.32■□□□□ 0.52
VCAN-204ENST00000502527 CAGE1Q8TC20 777 aa18.32■□□□□ 0.52
VCAN-204ENST00000502527 PKNOX2Q96KN3 472 aa18.32■□□□□ 0.52
VCAN-204ENST00000502527 CAPZA3Q96KX2 299 aa18.32■□□□□ 0.52
VCAN-204ENST00000502527 JADE2Q9NQC1 790 aa18.32■□□□□ 0.52
VCAN-204ENST00000502527 EMILIN3Q9NT22 766 aa18.32■□□□□ 0.52
VCAN-204ENST00000502527 CEP72Q9P209 647 aa18.32■□□□□ 0.52
VCAN-204ENST00000502527 NPHP3-ACAD11A0A0J9YXS1 232 aa18.31■□□□□ 0.52
VCAN-204ENST00000502527 SSU72P8A0A1W2PR75 194 aa18.31■□□□□ 0.52
VCAN-204ENST00000502527 SPDYE3A6NKU9 549 aa18.31■□□□□ 0.52
VCAN-204ENST00000502527 H0YIN7 160 aa18.31■□□□□ 0.52
VCAN-204ENST00000502527 GDF11O95390 407 aa18.31■□□□□ 0.52
VCAN-204ENST00000502527 SLC12A3P55017 1021 aa18.31■□□□□ 0.52
VCAN-204ENST00000502527 KCNMA1Q12791 1236 aa18.31■□□□□ 0.52
VCAN-204ENST00000502527 IKQ13123 557 aaPredicted RBP18.31■□□□□ 0.52
VCAN-204ENST00000502527 MAPK8IP2Q13387 824 aaPredicted RBP18.31■□□□□ 0.52
VCAN-204ENST00000502527 PPP4R3CPQ6ZMV5 832 aa18.31■□□□□ 0.52
VCAN-204ENST00000502527 NELFCDQ8IXH7 590 aa18.31■□□□□ 0.52
VCAN-204ENST00000502527 SCFD1Q8WVM8 642 aa18.31■□□□□ 0.52
VCAN-204ENST00000502527 SYN2Q92777 582 aaPredicted RBP18.31■□□□□ 0.52
VCAN-204ENST00000502527 FAM20AQ96MK3 541 aa18.31■□□□□ 0.52
VCAN-204ENST00000502527 FGFBP2Q9BYJ0 223 aa18.31■□□□□ 0.52
VCAN-204ENST00000502527 FAM184BQ9ULE4 1060 aa18.31■□□□□ 0.52
VCAN-204ENST00000502527 TARSL2A2RTX5 802 aaKnown RBP18.3■□□□□ 0.52
VCAN-204ENST00000502527 ENTPD3O75355 529 aa18.3■□□□□ 0.52
VCAN-204ENST00000502527 ERCC3P19447 782 aa18.3■□□□□ 0.52
VCAN-204ENST00000502527 CYP2C19P33261 490 aa18.3■□□□□ 0.52
VCAN-204ENST00000502527 SREBF1P36956 1147 aa18.3■□□□□ 0.52
VCAN-204ENST00000502527 MMP14P50281 582 aa18.3■□□□□ 0.52
VCAN-204ENST00000502527 SPIRE1Q08AE8 756 aa18.3■□□□□ 0.52
VCAN-204ENST00000502527 TRIM59Q8IWR1 403 aa18.3■□□□□ 0.52
VCAN-204ENST00000502527 SMCR8Q8TEV9 937 aaPredicted RBP18.3■□□□□ 0.52
VCAN-204ENST00000502527 ALS2CR12Q96Q35 445 aa18.3■□□□□ 0.52
VCAN-204ENST00000502527 KCTD10Q9H3F6 313 aa18.3■□□□□ 0.52
VCAN-204ENST00000502527 DNM3Q9UQ16 869 aa18.3■□□□□ 0.52
VCAN-204ENST00000502527 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.3■□□□□ 0.52
VCAN-204ENST00000502527 SIPA1L1O43166 1804 aa18.3■□□□□ 0.52
VCAN-204ENST00000502527 BRWD3Q6RI45 1802 aa18.3■□□□□ 0.52
VCAN-204ENST00000502527 POTEFA5A3E0 1075 aa18.3■□□□□ 0.52
VCAN-204ENST00000502527 POTEIP0CG38 1075 aa18.3■□□□□ 0.52
VCAN-204ENST00000502527 RPA1P27694 616 aa18.3■□□□□ 0.52
VCAN-204ENST00000502527 MAGEA1P43355 309 aa18.3■□□□□ 0.52
VCAN-204ENST00000502527 EDRF1Q3B7T1 1238 aa18.3■□□□□ 0.52
VCAN-204ENST00000502527 ARSHQ5FYA8 562 aa18.3■□□□□ 0.52
VCAN-204ENST00000502527 RBM26Q5T8P6 1007 aaKnown RBP18.3■□□□□ 0.52
VCAN-204ENST00000502527 POTEGQ6S5H5 508 aa18.3■□□□□ 0.52
VCAN-204ENST00000502527 POTEEQ6S8J3 1075 aa18.3■□□□□ 0.52
VCAN-204ENST00000502527 CATSPER3Q86XQ3 398 aa18.3■□□□□ 0.52
VCAN-204ENST00000502527 ZC3H3Q8IXZ2 948 aaKnown RBP18.3■□□□□ 0.52
VCAN-204ENST00000502527 CCDC155Q8N6L0 562 aa18.3■□□□□ 0.52
VCAN-204ENST00000502527 ZCCHC17Q9NP64 241 aaKnown RBP18.3■□□□□ 0.52
VCAN-204ENST00000502527 SNX12Q9UMY4 172 aa18.3■□□□□ 0.52
VCAN-204ENST00000502527 PJA2O43164 708 aa18.29■□□□□ 0.52
VCAN-204ENST00000502527 BMP3P12645 472 aa18.29■□□□□ 0.52
VCAN-204ENST00000502527 PRLRP16471 622 aa18.29■□□□□ 0.52
VCAN-204ENST00000502527 CACNB1Q02641 598 aaPredicted RBP18.29■□□□□ 0.52
VCAN-204ENST00000502527 ASTE1Q2TB18 679 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms