RNA–Protein interactions for RNA: ENST00000502478.1

CCSER1-202, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 744 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-202ENST00000502478 MAFKO60675 156 aa6.97□□□□□ -1.29
CCSER1-202ENST00000502478 C6P13671 934 aa6.97□□□□□ -1.29
CCSER1-202ENST00000502478 TACR2P21452 398 aa6.97□□□□□ -1.29
CCSER1-202ENST00000502478 PPP2CBP62714 309 aa6.97□□□□□ -1.29
CCSER1-202ENST00000502478 PPP2CAP67775 309 aa6.97□□□□□ -1.29
CCSER1-202ENST00000502478 MAP4K2Q12851 820 aa6.97□□□□□ -1.29
CCSER1-202ENST00000502478 ARHGEF18Q6ZSZ5 1173 aa6.97□□□□□ -1.29
CCSER1-202ENST00000502478 SPRED1Q7Z699 444 aa6.97□□□□□ -1.29
CCSER1-202ENST00000502478 CIR1Q86X95 450 aaPredicted RBP6.97□□□□□ -1.29
CCSER1-202ENST00000502478 KBTBD2Q8IY47 623 aa6.97□□□□□ -1.29
CCSER1-202ENST00000502478 TTLL11Q8NHH1 800 aa6.97□□□□□ -1.29
CCSER1-202ENST00000502478 SH3RF3Q8TEJ3 882 aaPredicted RBP6.97□□□□□ -1.29
CCSER1-202ENST00000502478 EPN3Q9H201 632 aa6.97□□□□□ -1.29
CCSER1-202ENST00000502478 ASH2LQ9UBL3 628 aa6.97□□□□□ -1.29
CCSER1-202ENST00000502478 FSHBP01225 129 aa6.96□□□□□ -1.3
CCSER1-202ENST00000502478 COL6A1P12109 1028 aa6.96□□□□□ -1.3
CCSER1-202ENST00000502478 SLC10A6Q3KNW5 377 aa6.96□□□□□ -1.3
CCSER1-202ENST00000502478 TMC5Q6UXY8 1006 aa6.96□□□□□ -1.3
CCSER1-202ENST00000502478 EEPD1Q7L9B9 569 aa6.96□□□□□ -1.3
CCSER1-202ENST00000502478 PROSER1Q86XN7 944 aa6.96□□□□□ -1.3
CCSER1-202ENST00000502478 VPS37DQ86XT2 251 aa6.96□□□□□ -1.3
CCSER1-202ENST00000502478 CDK5RAP1Q96SZ6 601 aaKnown RBP6.96□□□□□ -1.3
CCSER1-202ENST00000502478 KLC2Q9H0B6 622 aa6.96□□□□□ -1.3
CCSER1-202ENST00000502478 KRIT1O00522 736 aa6.95□□□□□ -1.3
CCSER1-202ENST00000502478 ETFBP38117 255 aa6.95□□□□□ -1.3
CCSER1-202ENST00000502478 GRIA2P42262 883 aa6.95□□□□□ -1.3
CCSER1-202ENST00000502478 PPP2R2AP63151 447 aa6.95□□□□□ -1.3
CCSER1-202ENST00000502478 NFATC3Q12968 1075 aa6.95□□□□□ -1.3
CCSER1-202ENST00000502478 SLFN13Q68D06 897 aa6.95□□□□□ -1.3
CCSER1-202ENST00000502478 TRMT10BQ6PF06 316 aaKnown RBP6.95□□□□□ -1.3
CCSER1-202ENST00000502478 BARX1Q9HBU1 254 aaPredicted RBP6.95□□□□□ -1.3
CCSER1-202ENST00000502478 SLC6A20Q9NP91 592 aa6.95□□□□□ -1.3
CCSER1-202ENST00000502478 GPR27Q9NS67 375 aa6.95□□□□□ -1.3
CCSER1-202ENST00000502478 RBPJLQ9UBG7 517 aa6.95□□□□□ -1.3
CCSER1-202ENST00000502478 NACADO15069 1562 aa6.95□□□□□ -1.3
CCSER1-202ENST00000502478 GJB6O95452 261 aa6.94□□□□□ -1.3
CCSER1-202ENST00000502478 CRIP3Q6Q6R5 217 aa6.94□□□□□ -1.3
CCSER1-202ENST00000502478 TRIM48Q8IWZ4 208 aa6.94□□□□□ -1.3
CCSER1-202ENST00000502478 Q8N1X5 172 aa6.94□□□□□ -1.3
CCSER1-202ENST00000502478 DTX3Q8N9I9 347 aa6.94□□□□□ -1.3
CCSER1-202ENST00000502478 KCTD13Q8WZ19 329 aa6.94□□□□□ -1.3
CCSER1-202ENST00000502478 SORCS2Q96PQ0 1159 aa6.94□□□□□ -1.3
CCSER1-202ENST00000502478 MEGF9Q9H1U4 602 aa6.94□□□□□ -1.3
CCSER1-202ENST00000502478 ADAM29Q9UKF5 820 aa6.94□□□□□ -1.3
CCSER1-202ENST00000502478 PATE3B3GLJ2 98 aa6.93□□□□□ -1.3
CCSER1-202ENST00000502478 AGRPO00253 132 aa6.93□□□□□ -1.3
CCSER1-202ENST00000502478 MSCO60682 206 aa6.93□□□□□ -1.3
CCSER1-202ENST00000502478 PIP4K2CQ8TBX8 421 aa6.93□□□□□ -1.3
CCSER1-202ENST00000502478 PTPN18Q99952 460 aa6.93□□□□□ -1.3
CCSER1-202ENST00000502478 SCAND2PQ9GZW5 306 aaPredicted RBP6.93□□□□□ -1.3
CCSER1-202ENST00000502478 JADE2Q9NQC1 790 aa6.93□□□□□ -1.3
CCSER1-202ENST00000502478 DLL4Q9NR61 685 aa6.93□□□□□ -1.3
CCSER1-202ENST00000502478 A0A1W2PQU0 124 aa6.92□□□□□ -1.3
CCSER1-202ENST00000502478 B4GALT4O60513 344 aa6.92□□□□□ -1.3
CCSER1-202ENST00000502478 KLHL18O94889 574 aa6.92□□□□□ -1.3
CCSER1-202ENST00000502478 SELENOPP49908 381 aa6.92□□□□□ -1.3
CCSER1-202ENST00000502478 R3HDM1Q15032 1099 aaKnown RBP6.92□□□□□ -1.3
CCSER1-202ENST00000502478 VASNQ6EMK4 673 aa6.92□□□□□ -1.3
CCSER1-202ENST00000502478 RSPO2Q6UXX9 243 aaPredicted RBP6.92□□□□□ -1.3
CCSER1-202ENST00000502478 NUDT10Q8NFP7 164 aa6.92□□□□□ -1.3
CCSER1-202ENST00000502478 NUDT11Q96G61 164 aa6.92□□□□□ -1.3
CCSER1-202ENST00000502478 WWC2-AS2Q96NR7 200 aa6.92□□□□□ -1.3
CCSER1-202ENST00000502478 JAM3Q9BX67 310 aa6.92□□□□□ -1.3
CCSER1-202ENST00000502478 PPARGC1AQ9UBK2 798 aaKnown RBP6.92□□□□□ -1.3
CCSER1-202ENST00000502478 SLC27A2O14975 620 aa6.91□□□□□ -1.3
CCSER1-202ENST00000502478 SUV39H1O43463 412 aa6.91□□□□□ -1.3
CCSER1-202ENST00000502478 DLX3O60479 287 aa6.91□□□□□ -1.3
CCSER1-202ENST00000502478 CHGBP05060 677 aa6.91□□□□□ -1.3
CCSER1-202ENST00000502478 FGRP09769 529 aa6.91□□□□□ -1.3
CCSER1-202ENST00000502478 GDF5P43026 501 aa6.91□□□□□ -1.3
CCSER1-202ENST00000502478 KRTAP5-3Q6L8H2 238 aa6.91□□□□□ -1.3
CCSER1-202ENST00000502478 ZNF585AQ6P3V2 769 aa6.91□□□□□ -1.3
CCSER1-202ENST00000502478 CLEC4DQ8WXI8 215 aa6.91□□□□□ -1.3
CCSER1-202ENST00000502478 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.91□□□□□ -1.3
CCSER1-202ENST00000502478 IER2Q9BTL4 223 aa6.91□□□□□ -1.3
CCSER1-202ENST00000502478 PHF20Q9BVI0 1012 aa6.91□□□□□ -1.3
CCSER1-202ENST00000502478 PDGFDQ9GZP0 370 aaPredicted RBP6.91□□□□□ -1.3
CCSER1-202ENST00000502478 DEF6Q9H4E7 631 aa6.91□□□□□ -1.3
CCSER1-202ENST00000502478 ZNF408Q9H9D4 720 aa6.91□□□□□ -1.3
CCSER1-202ENST00000502478 ZDHHC9Q9Y397 364 aa6.91□□□□□ -1.3
CCSER1-202ENST00000502478 KNG1P01042 644 aa6.9□□□□□ -1.3
CCSER1-202ENST00000502478 ERCC5P28715 1186 aaPredicted RBP6.9□□□□□ -1.3
CCSER1-202ENST00000502478 ACVRL1P37023 503 aa6.9□□□□□ -1.3
CCSER1-202ENST00000502478 GRIN1Q05586 938 aa6.9□□□□□ -1.3
CCSER1-202ENST00000502478 SMAD2Q15796 467 aaKnown RBP6.9□□□□□ -1.3
CCSER1-202ENST00000502478 USP53Q70EK8 1073 aa6.9□□□□□ -1.3
CCSER1-202ENST00000502478 OTOP3Q7RTS5 596 aa6.9□□□□□ -1.3
CCSER1-202ENST00000502478 PALM2Q8IXS6 379 aa6.9□□□□□ -1.3
CCSER1-202ENST00000502478 UHMK1Q8TAS1 419 aaKnown RBP6.9□□□□□ -1.3
CCSER1-202ENST00000502478 ZNF747Q9BV97 191 aa6.9□□□□□ -1.3
CCSER1-202ENST00000502478 TCAF1Q9Y4C2 921 aa6.9□□□□□ -1.3
CCSER1-202ENST00000502478 CYR61O00622 381 aa6.89□□□□□ -1.31
CCSER1-202ENST00000502478 CNOT4O95628 575 aaKnown RBP6.89□□□□□ -1.31
CCSER1-202ENST00000502478 SLPIP03973 132 aa6.89□□□□□ -1.31
CCSER1-202ENST00000502478 GNL2Q13823 731 aaKnown RBP6.89□□□□□ -1.31
CCSER1-202ENST00000502478 PHF19Q5T6S3 580 aa6.89□□□□□ -1.31
CCSER1-202ENST00000502478 Q6ZUG5 572 aa6.89□□□□□ -1.31
CCSER1-202ENST00000502478 RALYLQ86SE5 291 aaKnown RBP6.89□□□□□ -1.31
CCSER1-202ENST00000502478 VPS11Q9H270 941 aa6.89□□□□□ -1.31
CCSER1-202ENST00000502478 SEMA4AQ9H3S1 761 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms