RNA–Protein interactions for RNA: ENST00000502254.5

PTPN20-212, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-212ENST00000502254 ORC3Q9UBD5 711 aaPredicted RBP6.45□□□□□ -1.38
PTPN20-212ENST00000502254 ZNF112Q9UJU3 913 aa6.45□□□□□ -1.38
PTPN20-212ENST00000502254 HCN2Q9UL51 889 aa6.45□□□□□ -1.38
PTPN20-212ENST00000502254 KCNH4Q9UQ05 1017 aa6.45□□□□□ -1.38
PTPN20-212ENST00000502254 PCDHGC4Q9Y5F7 938 aa6.45□□□□□ -1.38
PTPN20-212ENST00000502254 ECM29Q5VYK3 1845 aa6.45□□□□□ -1.38
PTPN20-212ENST00000502254 FRMPD2Q68DX3 1309 aaPredicted RBP6.45□□□□□ -1.38
PTPN20-212ENST00000502254 hCG_1642624A0A1W2PR95 340 aa6.44□□□□□ -1.38
PTPN20-212ENST00000502254 A0A1W2PRG0 241 aa6.44□□□□□ -1.38
PTPN20-212ENST00000502254 UBE2Q2LH0YL09 131 aa6.44□□□□□ -1.38
PTPN20-212ENST00000502254 ATXN7O15265 892 aaPredicted RBP6.44□□□□□ -1.38
PTPN20-212ENST00000502254 ST8SIA5O15466 376 aa6.44□□□□□ -1.38
PTPN20-212ENST00000502254 PHACTR2O75167 634 aa6.44□□□□□ -1.38
PTPN20-212ENST00000502254 CTSHP09668 335 aa6.44□□□□□ -1.38
PTPN20-212ENST00000502254 PARP1P09874 1014 aaKnown RBP6.44□□□□□ -1.38
PTPN20-212ENST00000502254 PDHBP11177 359 aa6.44□□□□□ -1.38
PTPN20-212ENST00000502254 KIF5BP33176 963 aa6.44□□□□□ -1.38
PTPN20-212ENST00000502254 ECE1P42892 770 aa6.44□□□□□ -1.38
PTPN20-212ENST00000502254 NOVP48745 357 aa6.44□□□□□ -1.38
PTPN20-212ENST00000502254 GNAQP50148 359 aa6.44□□□□□ -1.38
PTPN20-212ENST00000502254 RCAN1P53805 252 aa6.44□□□□□ -1.38
PTPN20-212ENST00000502254 HMGN5P82970 282 aaKnown RBP6.44□□□□□ -1.38
PTPN20-212ENST00000502254 AKAP17AQ02040 695 aaKnown RBP6.44□□□□□ -1.38
PTPN20-212ENST00000502254 PTSQ03393 145 aa6.44□□□□□ -1.38
PTPN20-212ENST00000502254 TNP2Q05952 138 aa6.44□□□□□ -1.38
PTPN20-212ENST00000502254 SFSWAPQ12872 951 aaKnown RBP6.44□□□□□ -1.38
PTPN20-212ENST00000502254 IKQ13123 557 aaPredicted RBP6.44□□□□□ -1.38
PTPN20-212ENST00000502254 LAMC2Q13753 1193 aa6.44□□□□□ -1.38
PTPN20-212ENST00000502254 GRM4Q14833 912 aa6.44□□□□□ -1.38
PTPN20-212ENST00000502254 LARP1BQ659C4 914 aaKnown RBP6.44□□□□□ -1.38
PTPN20-212ENST00000502254 KCTD1Q719H9 257 aa6.44□□□□□ -1.38
PTPN20-212ENST00000502254 ARMC9Q7Z3E5 817 aa6.44□□□□□ -1.38
PTPN20-212ENST00000502254 GALNT12Q8IXK2 581 aa6.44□□□□□ -1.38
PTPN20-212ENST00000502254 SCYL3Q8IZE3 742 aa6.44□□□□□ -1.38
PTPN20-212ENST00000502254 SRBD1Q8N5C6 995 aaKnown RBP6.44□□□□□ -1.38
PTPN20-212ENST00000502254 SMARCC2Q8TAQ2 1214 aa6.44□□□□□ -1.38
PTPN20-212ENST00000502254 MKL1Q969V6 931 aa6.44□□□□□ -1.38
PTPN20-212ENST00000502254 PMEPA1Q969W9 287 aa6.44□□□□□ -1.38
PTPN20-212ENST00000502254 NUP88Q99567 741 aaPredicted RBP6.44□□□□□ -1.38
PTPN20-212ENST00000502254 FEZ1Q99689 392 aa6.44□□□□□ -1.38
PTPN20-212ENST00000502254 LLPHQ9BRT6 129 aaKnown RBP6.44□□□□□ -1.38
PTPN20-212ENST00000502254 GSX2Q9BZM3 304 aa6.44□□□□□ -1.38
PTPN20-212ENST00000502254 UBA5Q9GZZ9 404 aa6.44□□□□□ -1.38
PTPN20-212ENST00000502254 CPVLQ9H3G5 476 aa6.44□□□□□ -1.38
PTPN20-212ENST00000502254 SH2D4AQ9H788 454 aa6.44□□□□□ -1.38
PTPN20-212ENST00000502254 VAT1LQ9HCJ6 419 aa6.44□□□□□ -1.38
PTPN20-212ENST00000502254 METTL5Q9NRN9 209 aaKnown RBP6.44□□□□□ -1.38
PTPN20-212ENST00000502254 ABI2Q9NYB9 513 aaPredicted RBP6.44□□□□□ -1.38
PTPN20-212ENST00000502254 CHMP5Q9NZZ3 219 aa6.44□□□□□ -1.38
PTPN20-212ENST00000502254 MAD2L2Q9UI95 211 aa6.44□□□□□ -1.38
PTPN20-212ENST00000502254 KIF3AQ9Y496 699 aa6.44□□□□□ -1.38
PTPN20-212ENST00000502254 CSADQ9Y600 493 aa6.44□□□□□ -1.38
PTPN20-212ENST00000502254 CDK5RAP2Q96SN8 1893 aa6.44□□□□□ -1.38
PTPN20-212ENST00000502254 WDR90Q96KV7 1748 aa6.44□□□□□ -1.38
PTPN20-212ENST00000502254 SSC5DA1L4H1 1573 aa6.44□□□□□ -1.38
PTPN20-212ENST00000502254 GOLGB1Q14789 3259 aaKnown RBP6.44□□□□□ -1.38
PTPN20-212ENST00000502254 FOCADQ5VW36 1801 aa6.43□□□□□ -1.38
PTPN20-212ENST00000502254 VPS37CA5D8V6 355 aaPredicted RBP6.43□□□□□ -1.38
PTPN20-212ENST00000502254 TRIM75PA6NK02 468 aa6.43□□□□□ -1.38
PTPN20-212ENST00000502254 KLRF2D3W0D1 207 aa6.43□□□□□ -1.38
PTPN20-212ENST00000502254 F5H6K3 240 aa6.43□□□□□ -1.38
PTPN20-212ENST00000502254 H3BQV1 296 aa6.43□□□□□ -1.38
PTPN20-212ENST00000502254 CELF2O95319 508 aaKnown RBP6.43□□□□□ -1.38
PTPN20-212ENST00000502254 NDUFB10O96000 172 aa6.43□□□□□ -1.38
PTPN20-212ENST00000502254 FDPSP14324 419 aaKnown RBP6.43□□□□□ -1.38
PTPN20-212ENST00000502254 IFNAR1P17181 557 aa6.43□□□□□ -1.38
PTPN20-212ENST00000502254 PTPRAP18433 802 aa6.43□□□□□ -1.38
PTPN20-212ENST00000502254 SLC16A2P36021 539 aa6.43□□□□□ -1.38
PTPN20-212ENST00000502254 SLC1A4P43007 532 aa6.43□□□□□ -1.38
PTPN20-212ENST00000502254 VEGFBP49765 207 aa6.43□□□□□ -1.38
PTPN20-212ENST00000502254 GUCY1B3Q02153 619 aa6.43□□□□□ -1.38
PTPN20-212ENST00000502254 KLRC3Q07444 240 aa6.43□□□□□ -1.38
PTPN20-212ENST00000502254 SPP2Q13103 211 aa6.43□□□□□ -1.38
PTPN20-212ENST00000502254 VGLL4Q14135 290 aa6.43□□□□□ -1.38
PTPN20-212ENST00000502254 PPP2R5BQ15173 497 aa6.43□□□□□ -1.38
PTPN20-212ENST00000502254 NTRK3Q16288 839 aa6.43□□□□□ -1.38
PTPN20-212ENST00000502254 DBN1Q16643 649 aa6.43□□□□□ -1.38
PTPN20-212ENST00000502254 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.43□□□□□ -1.38
PTPN20-212ENST00000502254 TTBK2Q6IQ55 1244 aa6.43□□□□□ -1.38
PTPN20-212ENST00000502254 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.43□□□□□ -1.38
PTPN20-212ENST00000502254 TMTC3Q6ZXV5 915 aa6.43□□□□□ -1.38
PTPN20-212ENST00000502254 NBPF11Q86T75 865 aa6.43□□□□□ -1.38
PTPN20-212ENST00000502254 TRIM22Q8IYM9 498 aa6.43□□□□□ -1.38
PTPN20-212ENST00000502254 SPICE1Q8N0Z3 855 aa6.43□□□□□ -1.38
PTPN20-212ENST00000502254 C1orf127Q8N9H9 656 aa6.43□□□□□ -1.38
PTPN20-212ENST00000502254 TMEM87AQ8NBN3 555 aa6.43□□□□□ -1.38
PTPN20-212ENST00000502254 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.43□□□□□ -1.38
PTPN20-212ENST00000502254 EPS8L3Q8TE67 593 aaKnown RBP6.43□□□□□ -1.38
PTPN20-212ENST00000502254 DCAF4Q8WV16 495 aa6.43□□□□□ -1.38
PTPN20-212ENST00000502254 GMCL1Q96IK5 515 aa6.43□□□□□ -1.38
PTPN20-212ENST00000502254 CLMNQ96JQ2 1002 aa6.43□□□□□ -1.38
PTPN20-212ENST00000502254 MAP3K14Q99558 947 aa6.43□□□□□ -1.38
PTPN20-212ENST00000502254 LZTS2Q9BRK4 669 aa6.43□□□□□ -1.38
PTPN20-212ENST00000502254 ALG1Q9BT22 464 aa6.43□□□□□ -1.38
PTPN20-212ENST00000502254 AS3MTQ9HBK9 375 aa6.43□□□□□ -1.38
PTPN20-212ENST00000502254 GINM1Q9NU53 330 aa6.43□□□□□ -1.38
PTPN20-212ENST00000502254 TMX2Q9Y320 296 aa6.43□□□□□ -1.38
PTPN20-212ENST00000502254 ZHX2Q9Y6X8 837 aa6.43□□□□□ -1.38
PTPN20-212ENST00000502254 SIPA1L1O43166 1804 aa6.43□□□□□ -1.38
PTPN20-212ENST00000502254 SOBPA7XYQ1 873 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms