RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-222ENST00000498810 PDLIM7Q9NR12 457 aa12.31□□□□□ -0.44
CDK11A-222ENST00000498810 TMEM39AQ9NV64 488 aa12.31□□□□□ -0.44
CDK11A-222ENST00000498810 ELP1O95163 1332 aa12.31□□□□□ -0.44
CDK11A-222ENST00000498810 GOLGA8AA7E2F4 631 aa12.3□□□□□ -0.44
CDK11A-222ENST00000498810 GOLGA8BA8MQT2 603 aa12.3□□□□□ -0.44
CDK11A-222ENST00000498810 ZBTB43O43298 467 aa12.3□□□□□ -0.44
CDK11A-222ENST00000498810 DGAT1O75907 488 aa12.3□□□□□ -0.44
CDK11A-222ENST00000498810 CABYRO75952 493 aa12.3□□□□□ -0.44
CDK11A-222ENST00000498810 RAG1P15918 1043 aa12.3□□□□□ -0.44
CDK11A-222ENST00000498810 SNX17Q15036 470 aa12.3□□□□□ -0.44
CDK11A-222ENST00000498810 DUSP28Q4G0W2 176 aa12.3□□□□□ -0.44
CDK11A-222ENST00000498810 C1orf53Q5VUE5 145 aa12.3□□□□□ -0.44
CDK11A-222ENST00000498810 ERICH6BQ5W0A0 696 aa12.3□□□□□ -0.44
CDK11A-222ENST00000498810 TAPT1Q6NXT6 567 aa12.3□□□□□ -0.44
CDK11A-222ENST00000498810 CXCL17Q6UXB2 119 aa12.3□□□□□ -0.44
CDK11A-222ENST00000498810 TDHQ8IZJ6 230 aa12.3□□□□□ -0.44
CDK11A-222ENST00000498810 CCDC82Q8N4S0 544 aa12.3□□□□□ -0.44
CDK11A-222ENST00000498810 MORC4Q8TE76 937 aa12.3□□□□□ -0.44
CDK11A-222ENST00000498810 TCEANC2Q96MN5 208 aa12.3□□□□□ -0.44
CDK11A-222ENST00000498810 JAKMIP1Q96N16 626 aaKnown RBP12.3□□□□□ -0.44
CDK11A-222ENST00000498810 TAAR1Q96RJ0 339 aa12.3□□□□□ -0.44
CDK11A-222ENST00000498810 IWS1Q96ST2 819 aa12.3□□□□□ -0.44
CDK11A-222ENST00000498810 SPZ1Q9BXG8 430 aa12.3□□□□□ -0.44
CDK11A-222ENST00000498810 RIOX1Q9H6W3 641 aa12.3□□□□□ -0.44
CDK11A-222ENST00000498810 PXMP2Q9NR77 195 aa12.3□□□□□ -0.44
CDK11A-222ENST00000498810 POLR3EQ9NVU0 708 aa12.3□□□□□ -0.44
CDK11A-222ENST00000498810 RBM28Q9NW13 759 aaKnown RBP12.3□□□□□ -0.44
CDK11A-222ENST00000498810 GNEQ9Y223 722 aaKnown RBP12.3□□□□□ -0.44
CDK11A-222ENST00000498810 Q9Y3F1 56 aa12.3□□□□□ -0.44
CDK11A-222ENST00000498810 MRVI1Q9Y6F6 885 aa12.3□□□□□ -0.44
CDK11A-222ENST00000498810 DNAH12Q6ZR08 3092 aa12.29□□□□□ -0.44
CDK11A-222ENST00000498810 KLF18A0A0U1RQI7 1052 aa12.29□□□□□ -0.44
CDK11A-222ENST00000498810 PPP1R11O60927 126 aaPredicted RBP12.29□□□□□ -0.44
CDK11A-222ENST00000498810 PLEKHA8P1O95397 391 aa12.29□□□□□ -0.44
CDK11A-222ENST00000498810 CCND2P30279 289 aa12.29□□□□□ -0.44
CDK11A-222ENST00000498810 RTN1Q16799 776 aa12.29□□□□□ -0.44
CDK11A-222ENST00000498810 FAM47CQ5HY64 1035 aa12.29□□□□□ -0.44
CDK11A-222ENST00000498810 BLOC1S2Q6QNY1 142 aa12.29□□□□□ -0.44
CDK11A-222ENST00000498810 DHX32Q7L7V1 743 aaKnown RBP12.29□□□□□ -0.44
CDK11A-222ENST00000498810 HEATR3Q7Z4Q2 680 aa12.29□□□□□ -0.44
CDK11A-222ENST00000498810 RETREG3Q86VR2 466 aa12.29□□□□□ -0.44
CDK11A-222ENST00000498810 SAMD3Q8N6K7 520 aa12.29□□□□□ -0.44
CDK11A-222ENST00000498810 TBC1D5Q92609 795 aa12.29□□□□□ -0.44
CDK11A-222ENST00000498810 MTMR8Q96EF0 704 aa12.29□□□□□ -0.44
CDK11A-222ENST00000498810 GDF15Q99988 308 aa12.29□□□□□ -0.44
CDK11A-222ENST00000498810 MAP3K20Q9NYL2 800 aaKnown RBP12.29□□□□□ -0.44
CDK11A-222ENST00000498810 COL20A1Q9P218 1284 aa12.29□□□□□ -0.44
CDK11A-222ENST00000498810 DOCK5Q9H7D0 1870 aa12.29□□□□□ -0.44
CDK11A-222ENST00000498810 ARVCFO00192 962 aa12.28□□□□□ -0.44
CDK11A-222ENST00000498810 ZBTB24O43167 697 aaPredicted RBP12.28□□□□□ -0.44
CDK11A-222ENST00000498810 CYTH3O43739 400 aa12.28□□□□□ -0.44
CDK11A-222ENST00000498810 GH1P01241 217 aa12.28□□□□□ -0.44
CDK11A-222ENST00000498810 PTGS1P23219 599 aa12.28□□□□□ -0.44
CDK11A-222ENST00000498810 EDNRBP24530 442 aa12.28□□□□□ -0.44
CDK11A-222ENST00000498810 PSMA5P28066 241 aa12.28□□□□□ -0.44
CDK11A-222ENST00000498810 BMP8BP34820 402 aa12.28□□□□□ -0.44
CDK11A-222ENST00000498810 FXR1P51114 621 aaKnown RBP eCLIP12.28□□□□□ -0.44
CDK11A-222ENST00000498810 HSD17B4P51659 736 aa12.28□□□□□ -0.44
CDK11A-222ENST00000498810 FOXC1Q12948 553 aa12.28□□□□□ -0.44
CDK11A-222ENST00000498810 APOA5Q6Q788 366 aa12.28□□□□□ -0.44
CDK11A-222ENST00000498810 CMTR1Q8N1G2 835 aaKnown RBP12.28□□□□□ -0.44
CDK11A-222ENST00000498810 FANCBQ8NB91 859 aa12.28□□□□□ -0.44
CDK11A-222ENST00000498810 BADQ92934 168 aa12.28□□□□□ -0.44
CDK11A-222ENST00000498810 NR3C2P08235 984 aa12.27□□□□□ -0.45
CDK11A-222ENST00000498810 NDUFV2P19404 249 aa12.27□□□□□ -0.45
CDK11A-222ENST00000498810 CASTP20810 708 aaKnown RBP12.27□□□□□ -0.45
CDK11A-222ENST00000498810 METAP2P50579 478 aaKnown RBP eCLIP12.27□□□□□ -0.45
CDK11A-222ENST00000498810 ITGA7Q13683 1181 aa12.27□□□□□ -0.45
CDK11A-222ENST00000498810 ADCK5Q3MIX3 580 aa12.27□□□□□ -0.45
CDK11A-222ENST00000498810 GNPTABQ3T906 1256 aa12.27□□□□□ -0.45
CDK11A-222ENST00000498810 CCSAPQ6IQ19 270 aaPredicted RBP12.27□□□□□ -0.45
CDK11A-222ENST00000498810 TMTC3Q6ZXV5 915 aa12.27□□□□□ -0.45
CDK11A-222ENST00000498810 SGMS1Q86VZ5 419 aa12.27□□□□□ -0.45
CDK11A-222ENST00000498810 MTG1Q9BT17 334 aaPredicted RBP12.27□□□□□ -0.45
CDK11A-222ENST00000498810 PPP1R12CQ9BZL4 782 aa12.27□□□□□ -0.45
CDK11A-222ENST00000498810 EHMT1Q9H9B1 1298 aa12.27□□□□□ -0.45
CDK11A-222ENST00000498810 NOD1Q9Y239 953 aa12.27□□□□□ -0.45
CDK11A-222ENST00000498810 hCG_1642624A0A1W2PR95 340 aa12.26□□□□□ -0.45
CDK11A-222ENST00000498810 RBM47A0AV96 593 aaKnown RBP12.26□□□□□ -0.45
CDK11A-222ENST00000498810 SPDYE3A6NKU9 549 aa12.26□□□□□ -0.45
CDK11A-222ENST00000498810 KPNA6O60684 536 aa12.26□□□□□ -0.45
CDK11A-222ENST00000498810 EIF3JO75822 258 aaKnown RBP12.26□□□□□ -0.45
CDK11A-222ENST00000498810 JUNDP17535 347 aa12.26□□□□□ -0.45
CDK11A-222ENST00000498810 SMARCA1P28370 1054 aa12.26□□□□□ -0.45
CDK11A-222ENST00000498810 HSPA4P34932 840 aa12.26□□□□□ -0.45
CDK11A-222ENST00000498810 NAPAP54920 295 aa12.26□□□□□ -0.45
CDK11A-222ENST00000498810 PSMC6P62333 389 aa12.26□□□□□ -0.45
CDK11A-222ENST00000498810 FPGSQ05932 587 aa12.26□□□□□ -0.45
CDK11A-222ENST00000498810 PGM5Q15124 567 aa12.26□□□□□ -0.45
CDK11A-222ENST00000498810 LY6KQ17RY6 165 aa12.26□□□□□ -0.45
CDK11A-222ENST00000498810 PKDCCQ504Y2 493 aa12.26□□□□□ -0.45
CDK11A-222ENST00000498810 TMEM63BQ5T3F8 832 aa12.26□□□□□ -0.45
CDK11A-222ENST00000498810 Q6ZUG5 572 aa12.26□□□□□ -0.45
CDK11A-222ENST00000498810 ANKRD33Q7Z3H0 272 aa12.26□□□□□ -0.45
CDK11A-222ENST00000498810 SH3RF1Q7Z6J0 888 aa12.26□□□□□ -0.45
CDK11A-222ENST00000498810 SRBD1Q8N5C6 995 aaKnown RBP12.26□□□□□ -0.45
CDK11A-222ENST00000498810 COPS5Q92905 334 aa12.26□□□□□ -0.45
CDK11A-222ENST00000498810 TOX2Q96NM4 488 aa12.26□□□□□ -0.45
CDK11A-222ENST00000498810 PDCD2LQ9BRP1 358 aa12.26□□□□□ -0.45
CDK11A-222ENST00000498810 SEZ6LQ9BYH1 1024 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms