RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	ZNF76	P36508	570 aa		12	□□□□□ -0.49
FXR1-222	ENST00000498658	NEK4	P51957	841 aa		12	□□□□□ -0.49
FXR1-222	ENST00000498658	AK2	P54819	239 aa		12	□□□□□ -0.49
FXR1-222	ENST00000498658	STK3	Q13188	491 aa		12	□□□□□ -0.49
FXR1-222	ENST00000498658	PPIG	Q13427	754 aa	Known RBP eCLIP	12	□□□□□ -0.49
FXR1-222	ENST00000498658	CEP55	Q53EZ4	464 aa		12	□□□□□ -0.49
FXR1-222	ENST00000498658	CYFIP1	Q7L576	1253 aa		12	□□□□□ -0.49
FXR1-222	ENST00000498658	NIPA1	Q7RTP0	329 aa		12	□□□□□ -0.49
FXR1-222	ENST00000498658	C7orf31	Q8N865	590 aa		12	□□□□□ -0.49
FXR1-222	ENST00000498658	WASF1	Q92558	559 aa		12	□□□□□ -0.49
FXR1-222	ENST00000498658	ZFP91	Q96JP5	570 aa	Predicted RBP	12	□□□□□ -0.49
FXR1-222	ENST00000498658	MXRA8	Q9BRK3	442 aa		12	□□□□□ -0.49
FXR1-222	ENST00000498658	TRPV6	Q9H1D0	765 aa		12	□□□□□ -0.49
FXR1-222	ENST00000498658	HIPK3	Q9H422	1215 aa		12	□□□□□ -0.49
FXR1-222	ENST00000498658	ZNF215	Q9UL58	517 aa	Predicted RBP	12	□□□□□ -0.49
FXR1-222	ENST00000498658		H3BRB1	525 aa		11.99	□□□□□ -0.49
FXR1-222	ENST00000498658	SEC24B	O95487	1268 aa		11.99	□□□□□ -0.49
FXR1-222	ENST00000498658	PSEN2	P49810	448 aa		11.99	□□□□□ -0.49
FXR1-222	ENST00000498658	FXR1	P51114	621 aa	Known RBP eCLIP	11.99	□□□□□ -0.49
FXR1-222	ENST00000498658	NLRP5	P59047	1200 aa		11.99	□□□□□ -0.49
FXR1-222	ENST00000498658	ARHGAP4	P98171	946 aa		11.99	□□□□□ -0.49
FXR1-222	ENST00000498658	SCRN1	Q12765	414 aa		11.99	□□□□□ -0.49
FXR1-222	ENST00000498658	SEMA3F	Q13275	785 aa		11.99	□□□□□ -0.49
FXR1-222	ENST00000498658	BFSP2	Q13515	415 aa		11.99	□□□□□ -0.49
FXR1-222	ENST00000498658	MFSD10	Q14728	455 aa		11.99	□□□□□ -0.49
FXR1-222	ENST00000498658	C8orf34	Q49A92	452 aa		11.99	□□□□□ -0.49
FXR1-222	ENST00000498658	JAKMIP3	Q5VZ66	844 aa		11.99	□□□□□ -0.49
FXR1-222	ENST00000498658	GPR153	Q6NV75	609 aa		11.99	□□□□□ -0.49
FXR1-222	ENST00000498658	CCDC155	Q8N6L0	562 aa		11.99	□□□□□ -0.49
FXR1-222	ENST00000498658	SDF4	Q9BRK5	362 aa		11.99	□□□□□ -0.49
FXR1-222	ENST00000498658	PPP1R12C	Q9BZL4	782 aa		11.99	□□□□□ -0.49
FXR1-222	ENST00000498658	TUT1	Q9H6E5	874 aa	Known RBP	11.99	□□□□□ -0.49
FXR1-222	ENST00000498658	TRMT13	Q9NUP7	481 aa	Known RBP	11.99	□□□□□ -0.49
FXR1-222	ENST00000498658	VPS54	Q9P1Q0	977 aa		11.99	□□□□□ -0.49
FXR1-222	ENST00000498658	TPCN1	Q9ULQ1	816 aa		11.99	□□□□□ -0.49
FXR1-222	ENST00000498658	STK36	Q9NRP7	1315 aa		11.99	□□□□□ -0.49
FXR1-222	ENST00000498658	HAS3	O00219	553 aa		11.98	□□□□□ -0.49
FXR1-222	ENST00000498658	MEIS1	O00470	390 aa		11.98	□□□□□ -0.49
FXR1-222	ENST00000498658	CYP3A4	P08684	503 aa		11.98	□□□□□ -0.49
FXR1-222	ENST00000498658	GNAT1	P11488	350 aa		11.98	□□□□□ -0.49
FXR1-222	ENST00000498658	KCNA2	P16389	499 aa		11.98	□□□□□ -0.49
FXR1-222	ENST00000498658	ITGB8	P26012	769 aa		11.98	□□□□□ -0.49
FXR1-222	ENST00000498658	CHMP4BP1	P59074	171 aa		11.98	□□□□□ -0.49
FXR1-222	ENST00000498658	SET	Q01105	290 aa	Predicted RBP	11.98	□□□□□ -0.49
FXR1-222	ENST00000498658	PTGIS	Q16647	500 aa		11.98	□□□□□ -0.49
FXR1-222	ENST00000498658	KIAA0753	Q2KHM9	967 aa		11.98	□□□□□ -0.49
FXR1-222	ENST00000498658	RPUSD2	Q8IZ73	545 aa	Known RBP	11.98	□□□□□ -0.49
FXR1-222	ENST00000498658	RETREG2	Q8NC44	543 aa		11.98	□□□□□ -0.49
FXR1-222	ENST00000498658	CAGE1	Q8TC20	777 aa		11.98	□□□□□ -0.49
FXR1-222	ENST00000498658	SEPT1	Q8WYJ6	367 aa		11.98	□□□□□ -0.49
FXR1-222	ENST00000498658	KAT2B	Q92831	832 aa		11.98	□□□□□ -0.49
FXR1-222	ENST00000498658	TNPO1	Q92973	898 aa	Known RBP	11.98	□□□□□ -0.49
FXR1-222	ENST00000498658	GPR20	Q99678	358 aa		11.98	□□□□□ -0.49
FXR1-222	ENST00000498658	LARP6	Q9BRS8	491 aa	Known RBP	11.98	□□□□□ -0.49
FXR1-222	ENST00000498658	C16orf70	Q9BSU1	422 aa		11.98	□□□□□ -0.49
FXR1-222	ENST00000498658	NOC4L	Q9BVI4	516 aa	Known RBP	11.98	□□□□□ -0.49
FXR1-222	ENST00000498658	JPH1	Q9HDC5	661 aa	Predicted RBP	11.98	□□□□□ -0.49
FXR1-222	ENST00000498658	KCNH7	Q9NS40	1196 aa		11.98	□□□□□ -0.49
FXR1-222	ENST00000498658	TMEM260	Q9NX78	707 aa		11.98	□□□□□ -0.49
FXR1-222	ENST00000498658	GTF2IRD1	Q9UHL9	959 aa		11.98	□□□□□ -0.49
FXR1-222	ENST00000498658	PCDHA4	Q9UN74	947 aa		11.98	□□□□□ -0.49
FXR1-222	ENST00000498658	NFASC	O94856	1347 aa		11.97	□□□□□ -0.49
FXR1-222	ENST00000498658	SORBS3	O60504	671 aa		11.97	□□□□□ -0.49
FXR1-222	ENST00000498658	PARN	O95453	639 aa	Known RBP	11.97	□□□□□ -0.49
FXR1-222	ENST00000498658	LGALS2	P05162	132 aa		11.97	□□□□□ -0.49
FXR1-222	ENST00000498658	PFKM	P08237	780 aa		11.97	□□□□□ -0.49
FXR1-222	ENST00000498658	ZNF286B	P0CG31	522 aa		11.97	□□□□□ -0.49
FXR1-222	ENST00000498658	RFC2	P35250	354 aa		11.97	□□□□□ -0.49
FXR1-222	ENST00000498658	USP11	P51784	963 aa		11.97	□□□□□ -0.49
FXR1-222	ENST00000498658	PSRC1	Q6PGN9	363 aa	Predicted RBP	11.97	□□□□□ -0.49
FXR1-222	ENST00000498658	CRYGN	Q8WXF5	182 aa		11.97	□□□□□ -0.49
FXR1-222	ENST00000498658	GTF3C6	Q969F1	213 aa		11.97	□□□□□ -0.49
FXR1-222	ENST00000498658	ALG1	Q9BT22	464 aa		11.97	□□□□□ -0.49
FXR1-222	ENST00000498658	MTIF3	Q9H2K0	278 aa	Known RBP	11.97	□□□□□ -0.49
FXR1-222	ENST00000498658	HDAC6	Q9UBN7	1215 aa		11.97	□□□□□ -0.49
FXR1-222	ENST00000498658	TCEAL9	Q9UHQ7	104 aa		11.97	□□□□□ -0.49
FXR1-222	ENST00000498658	LAMA3	Q16787	3333 aa		11.97	□□□□□ -0.49
FXR1-222	ENST00000498658	ATP9A	O75110	1047 aa		11.96	□□□□□ -0.49
FXR1-222	ENST00000498658	CYP2C9	P11712	490 aa		11.96	□□□□□ -0.49
FXR1-222	ENST00000498658	CSF2RA	P15509	400 aa		11.96	□□□□□ -0.49
FXR1-222	ENST00000498658	CYP2C18	P33260	490 aa		11.96	□□□□□ -0.49
FXR1-222	ENST00000498658	TCF7	P36402	384 aa	Predicted RBP	11.96	□□□□□ -0.49
FXR1-222	ENST00000498658	RBM25	P49756	843 aa	Known RBP	11.96	□□□□□ -0.49
FXR1-222	ENST00000498658	SHH	Q15465	462 aa		11.96	□□□□□ -0.49
FXR1-222	ENST00000498658	ME3	Q16798	604 aa		11.96	□□□□□ -0.49
FXR1-222	ENST00000498658	GDF6	Q6KF10	455 aa	Predicted RBP	11.96	□□□□□ -0.49
FXR1-222	ENST00000498658	PLA2G4D	Q86XP0	818 aa		11.96	□□□□□ -0.49
FXR1-222	ENST00000498658	BLID	Q8IZY5	108 aa		11.96	□□□□□ -0.49
FXR1-222	ENST00000498658	DAGLB	Q8NCG7	672 aa		11.96	□□□□□ -0.49
FXR1-222	ENST00000498658	AFAP1L1	Q8TED9	768 aa		11.96	□□□□□ -0.49
FXR1-222	ENST00000498658	PGBD1	Q96JS3	809 aa		11.96	□□□□□ -0.49
FXR1-222	ENST00000498658	RNPC3	Q96LT9	517 aa	Known RBP	11.96	□□□□□ -0.49
FXR1-222	ENST00000498658	SMARCAD1	Q9H4L7	1026 aa		11.96	□□□□□ -0.49
FXR1-222	ENST00000498658	AGO4	Q9HCK5	861 aa	Known RBP	11.96	□□□□□ -0.49
FXR1-222	ENST00000498658	IL23A	Q9NPF7	189 aa		11.96	□□□□□ -0.49
FXR1-222	ENST00000498658	TBC1D22B	Q9NU19	505 aa		11.96	□□□□□ -0.49
FXR1-222	ENST00000498658	ERAP1	Q9NZ08	941 aa		11.96	□□□□□ -0.49
FXR1-222	ENST00000498658	SLC9A2	Q9UBY0	812 aa		11.96	□□□□□ -0.49
FXR1-222	ENST00000498658	LIMCH1	Q9UPQ0	1083 aa		11.96	□□□□□ -0.49
FXR1-222	ENST00000498658	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.96	□□□□□ -0.49

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