RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 SCNN1DP51172 638 aa18.12■□□□□ 0.49
COL6A1-206ENST00000498614 GNGT1P63211 74 aa18.12■□□□□ 0.49
COL6A1-206ENST00000498614 FIGNQ5HY92 759 aa18.12■□□□□ 0.49
COL6A1-206ENST00000498614 ZSCAN29Q8IWY8 852 aaPredicted RBP18.12■□□□□ 0.49
COL6A1-206ENST00000498614 CDK5RAP3Q96JB5 506 aa18.12■□□□□ 0.49
COL6A1-206ENST00000498614 ZC3H12CQ9C0D7 883 aaKnown RBP18.12■□□□□ 0.49
COL6A1-206ENST00000498614 SEMA6BQ9H3T3 888 aa18.12■□□□□ 0.49
COL6A1-206ENST00000498614 LTBP1Q14766 1721 aa18.11■□□□□ 0.49
COL6A1-206ENST00000498614 hCG_1984214I3L0E3 225 aa18.11■□□□□ 0.49
COL6A1-206ENST00000498614 SLURP2P0DP57 97 aa18.11■□□□□ 0.49
COL6A1-206ENST00000498614 ATP2B2Q01814 1243 aa18.11■□□□□ 0.49
COL6A1-206ENST00000498614 ORC2Q13416 577 aaPredicted RBP18.11■□□□□ 0.49
COL6A1-206ENST00000498614 TTBK2Q6IQ55 1244 aa18.11■□□□□ 0.49
COL6A1-206ENST00000498614 FAM114A1Q8IWE2 563 aa18.11■□□□□ 0.49
COL6A1-206ENST00000498614 ZNF713Q8N859 430 aaPredicted RBP18.11■□□□□ 0.49
COL6A1-206ENST00000498614 OSBPL9Q96SU4 736 aa18.11■□□□□ 0.49
COL6A1-206ENST00000498614 JMJD4Q9H9V9 463 aa18.11■□□□□ 0.49
COL6A1-206ENST00000498614 FAM169AQ9Y6X4 670 aa18.11■□□□□ 0.49
COL6A1-206ENST00000498614 IGKV6D-41A0A0C4DH26 115 aa18.11■□□□□ 0.49
COL6A1-206ENST00000498614 EIF3HO15372 352 aaKnown RBP eCLIP18.11■□□□□ 0.492e-6■■■□□ 15.9
COL6A1-206ENST00000498614 USO1O60763 962 aaKnown RBP18.11■□□□□ 0.49
COL6A1-206ENST00000498614 SNHG28P0DPA3 235 aa18.11■□□□□ 0.49
COL6A1-206ENST00000498614 TMEM266Q2M3C6 531 aa18.11■□□□□ 0.49
COL6A1-206ENST00000498614 ADGRF4Q8IZF3 695 aa18.11■□□□□ 0.49
COL6A1-206ENST00000498614 BCAS4Q8TDM0 211 aa18.11■□□□□ 0.49
COL6A1-206ENST00000498614 LARP4BQ92615 738 aaKnown RBP18.11■□□□□ 0.49
COL6A1-206ENST00000498614 ARL8AQ96BM9 186 aa18.11■□□□□ 0.49
COL6A1-206ENST00000498614 NUDT12Q9BQG2 462 aa18.11■□□□□ 0.49
COL6A1-206ENST00000498614 DBNDD1Q9H9R9 158 aa18.11■□□□□ 0.49
COL6A1-206ENST00000498614 KCNQ5Q9NR82 932 aa18.11■□□□□ 0.49
COL6A1-206ENST00000498614 USP40Q9NVE5 1235 aa18.11■□□□□ 0.49
COL6A1-206ENST00000498614 ADAMTSL1Q8N6G6 1762 aa18.1■□□□□ 0.49
COL6A1-206ENST00000498614 GOLGA8KD6RF30 607 aa18.1■□□□□ 0.49
COL6A1-206ENST00000498614 EBAG9O00559 213 aa18.1■□□□□ 0.49
COL6A1-206ENST00000498614 NCK2O43639 380 aa18.1■□□□□ 0.49
COL6A1-206ENST00000498614 PPP1R11O60927 126 aaPredicted RBP18.1■□□□□ 0.49
COL6A1-206ENST00000498614 TTLL1O95922 423 aa18.1■□□□□ 0.49
COL6A1-206ENST00000498614 SLC16A2P36021 539 aa18.1■□□□□ 0.49
COL6A1-206ENST00000498614 EIF4A3P38919 411 aaKnown RBP18.1■□□□□ 0.49
COL6A1-206ENST00000498614 LIG3P49916 1009 aa18.1■□□□□ 0.49
COL6A1-206ENST00000498614 FXR2P51116 673 aaKnown RBP eCLIP18.1■□□□□ 0.49
COL6A1-206ENST00000498614 KIF11P52732 1056 aa18.1■□□□□ 0.49
COL6A1-206ENST00000498614 TGFB2P61812 414 aa18.1■□□□□ 0.49
COL6A1-206ENST00000498614 ITIH3Q06033 890 aa18.1■□□□□ 0.49
COL6A1-206ENST00000498614 TTMPQ5BVD1 217 aa18.1■□□□□ 0.49
COL6A1-206ENST00000498614 FKBP15Q5T1M5 1219 aa18.1■□□□□ 0.49
COL6A1-206ENST00000498614 HAUS3Q68CZ6 603 aa18.1■□□□□ 0.49
COL6A1-206ENST00000498614 FAM107BQ9H098 131 aa18.1■□□□□ 0.49
COL6A1-206ENST00000498614 SPON1Q9HCB6 807 aa18.1■□□□□ 0.49
COL6A1-206ENST00000498614 PIM2Q9P1W9 311 aa18.1■□□□□ 0.49
COL6A1-206ENST00000498614 SERPINB13Q9UIV8 391 aa18.1■□□□□ 0.49
COL6A1-206ENST00000498614 PLAGL2Q9UPG8 496 aa18.1■□□□□ 0.49
COL6A1-206ENST00000498614 PRLRP16471 622 aa18.1■□□□□ 0.49
COL6A1-206ENST00000498614 ZNF543Q08ER8 600 aa18.1■□□□□ 0.49
COL6A1-206ENST00000498614 SNX29Q8TEQ0 813 aa18.1■□□□□ 0.49
COL6A1-206ENST00000498614 GJA10Q969M2 543 aa18.1■□□□□ 0.49
COL6A1-206ENST00000498614 COA1Q9GZY4 146 aa18.1■□□□□ 0.49
COL6A1-206ENST00000498614 LRRC37AA6NMS7 1700 aa18.09■□□□□ 0.49
COL6A1-206ENST00000498614 MPHOSPH10O00566 681 aaKnown RBP18.09■□□□□ 0.49
COL6A1-206ENST00000498614 HNRNPH3P31942 346 aaKnown RBP18.09■□□□□ 0.49
COL6A1-206ENST00000498614 FAM207AQ9NSI2 230 aaPredicted RBP18.09■□□□□ 0.49
COL6A1-206ENST00000498614 STK17AQ9UEE5 414 aa18.09■□□□□ 0.49
COL6A1-206ENST00000498614 SALL4Q9UJQ4 1053 aa18.09■□□□□ 0.49
COL6A1-206ENST00000498614 BCS1LQ9Y276 419 aa18.09■□□□□ 0.49
COL6A1-206ENST00000498614 HYOU1Q9Y4L1 999 aa18.09■□□□□ 0.49
COL6A1-206ENST00000498614 PNMA6FA0A0J9YX94 578 aa18.09■□□□□ 0.49
COL6A1-206ENST00000498614 SHMT1P34896 483 aa18.09■□□□□ 0.49
COL6A1-206ENST00000498614 PPP1R2P41236 205 aa18.09■□□□□ 0.49
COL6A1-206ENST00000498614 AOC3Q16853 763 aa18.09■□□□□ 0.49
COL6A1-206ENST00000498614 GBP6Q6ZN66 633 aa18.09■□□□□ 0.49
COL6A1-206ENST00000498614 UNC13DQ70J99 1090 aa18.09■□□□□ 0.49
COL6A1-206ENST00000498614 KCTD1Q719H9 257 aa18.09■□□□□ 0.49
COL6A1-206ENST00000498614 KCNK18Q7Z418 384 aa18.09■□□□□ 0.49
COL6A1-206ENST00000498614 RUBCNQ92622 972 aa18.09■□□□□ 0.49
COL6A1-206ENST00000498614 KAT2BQ92831 832 aa18.09■□□□□ 0.49
COL6A1-206ENST00000498614 STIM2Q9P246 746 aa18.09■□□□□ 0.49
COL6A1-206ENST00000498614 SIK3Q9Y2K2 1263 aa18.09■□□□□ 0.49
COL6A1-206ENST00000498614 OPA1O60313 960 aa18.08■□□□□ 0.48
COL6A1-206ENST00000498614 EPHB4P54760 987 aa18.08■□□□□ 0.48
COL6A1-206ENST00000498614 CENPPQ6IPU0 288 aa18.08■□□□□ 0.48
COL6A1-206ENST00000498614 ANKRD13CQ8N6S4 541 aa18.08■□□□□ 0.48
COL6A1-206ENST00000498614 UIMC1Q96RL1 719 aa18.08■□□□□ 0.48
COL6A1-206ENST00000498614 RIC8AQ9NPQ8 531 aa18.08■□□□□ 0.48
COL6A1-206ENST00000498614 ERLIN2O94905 339 aa18.08■□□□□ 0.48
COL6A1-206ENST00000498614 TCP1P17987 556 aaKnown RBP18.08■□□□□ 0.48
COL6A1-206ENST00000498614 ERCC3P19447 782 aa18.08■□□□□ 0.48
COL6A1-206ENST00000498614 GUCY2CP25092 1073 aa18.08■□□□□ 0.48
COL6A1-206ENST00000498614 CCDC181Q5TID7 509 aa18.08■□□□□ 0.48
COL6A1-206ENST00000498614 KRT79Q5XKE5 535 aa18.08■□□□□ 0.48
COL6A1-206ENST00000498614 RAD54LQ92698 747 aa18.08■□□□□ 0.48
COL6A1-206ENST00000498614 RAB34Q9BZG1 259 aa18.08■□□□□ 0.48
COL6A1-206ENST00000498614 DEF6Q9H4E7 631 aa18.08■□□□□ 0.48
COL6A1-206ENST00000498614 SAMM50Q9Y512 469 aa18.08■□□□□ 0.48
COL6A1-206ENST00000498614 USP17L10C9JJH3 530 aa18.07■□□□□ 0.48
COL6A1-206ENST00000498614 G3V3G9 751 aa18.07■□□□□ 0.48
COL6A1-206ENST00000498614 RAD21O60216 631 aa18.07■□□□□ 0.48
COL6A1-206ENST00000498614 LCA5LO95447 670 aa18.07■□□□□ 0.48
COL6A1-206ENST00000498614 EPB41P11171 864 aaKnown RBP18.07■□□□□ 0.48
COL6A1-206ENST00000498614 VWA3BQ502W6 1294 aa18.07■□□□□ 0.48
COL6A1-206ENST00000498614 COBLL1Q53SF7 1204 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms