RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 IL31RAQ8NI17 732 aa13.91□□□□□ -0.18
CNOT4-211ENST00000498534 ATP6V0A1Q93050 837 aa13.91□□□□□ -0.18
CNOT4-211ENST00000498534 ZFP91Q96JP5 570 aaPredicted RBP13.91□□□□□ -0.18
CNOT4-211ENST00000498534 TGS1Q96RS0 853 aaKnown RBP13.91□□□□□ -0.18
CNOT4-211ENST00000498534 C16orf70Q9BSU1 422 aa13.91□□□□□ -0.18
CNOT4-211ENST00000498534 IL25Q9H293 177 aa13.91□□□□□ -0.18
CNOT4-211ENST00000498534 INSL6Q9Y581 213 aa13.91□□□□□ -0.18
CNOT4-211ENST00000498534 XIRP2A4UGR9 3374 aa13.91□□□□□ -0.18
CNOT4-211ENST00000498534 BAZ2BQ9UIF8 2168 aaKnown RBP13.9□□□□□ -0.18
CNOT4-211ENST00000498534 E7EWF7 191 aa13.9□□□□□ -0.18
CNOT4-211ENST00000498534 CHMLP26374 656 aa13.9□□□□□ -0.18
CNOT4-211ENST00000498534 ERVK-21P61565 698 aa13.9□□□□□ -0.18
CNOT4-211ENST00000498534 PTH1RQ03431 593 aa13.9□□□□□ -0.18
CNOT4-211ENST00000498534 TROAPQ12815 778 aa13.9□□□□□ -0.18
CNOT4-211ENST00000498534 PIBF1Q8WXW3 757 aa13.9□□□□□ -0.18
CNOT4-211ENST00000498534 CUL5Q93034 780 aa13.9□□□□□ -0.18
CNOT4-211ENST00000498534 NECAB3Q96P71 396 aaPredicted RBP13.9□□□□□ -0.18
CNOT4-211ENST00000498534 C1QTNF1Q9BXJ1 281 aa13.9□□□□□ -0.18
CNOT4-211ENST00000498534 MTUS1Q9ULD2 1270 aa13.9□□□□□ -0.18
CNOT4-211ENST00000498534 SPATA31C2B4DYI2 1134 aa13.89□□□□□ -0.19
CNOT4-211ENST00000498534 CYTH3O43739 400 aa13.89□□□□□ -0.19
CNOT4-211ENST00000498534 LPXNO60711 386 aa13.89□□□□□ -0.19
CNOT4-211ENST00000498534 GSPT1P15170 499 aaKnown RBP13.89□□□□□ -0.19
CNOT4-211ENST00000498534 PDE4AP27815 886 aa13.89□□□□□ -0.19
CNOT4-211ENST00000498534 ICAM3P32942 547 aa13.89□□□□□ -0.19
CNOT4-211ENST00000498534 KIF5BP33176 963 aa13.89□□□□□ -0.19
CNOT4-211ENST00000498534 SLC35G1Q2M3R5 365 aa13.89□□□□□ -0.19
CNOT4-211ENST00000498534 TRAF7Q6Q0C0 670 aa13.89□□□□□ -0.19
CNOT4-211ENST00000498534 DBF4BQ8NFT6 615 aa13.89□□□□□ -0.19
CNOT4-211ENST00000498534 CTCFLQ8NI51 663 aaPredicted RBP13.89□□□□□ -0.19
CNOT4-211ENST00000498534 SMARCC2Q8TAQ2 1214 aa13.89□□□□□ -0.19
CNOT4-211ENST00000498534 SEPT8Q92599 483 aa13.89□□□□□ -0.19
CNOT4-211ENST00000498534 WNT8BQ93098 351 aa13.89□□□□□ -0.19
CNOT4-211ENST00000498534 RRP36Q96EU6 259 aaKnown RBP13.89□□□□□ -0.19
CNOT4-211ENST00000498534 RNPEPQ9H4A4 650 aa13.89□□□□□ -0.19
CNOT4-211ENST00000498534 SUGCTQ9HAC7 445 aa13.89□□□□□ -0.19
CNOT4-211ENST00000498534 RTEL1Q9NZ71 1219 aa13.89□□□□□ -0.19
CNOT4-211ENST00000498534 LINC01553A4QN01 128 aa13.88□□□□□ -0.19
CNOT4-211ENST00000498534 FIBPO43427 364 aa13.88□□□□□ -0.19
CNOT4-211ENST00000498534 CAND2O75155 1236 aa13.88□□□□□ -0.19
CNOT4-211ENST00000498534 LGALS2P05162 132 aa13.88□□□□□ -0.19
CNOT4-211ENST00000498534 SMIM10L2AP0DMW4 78 aa13.88□□□□□ -0.19
CNOT4-211ENST00000498534 SMIM10L2BP0DMW5 78 aa13.88□□□□□ -0.19
CNOT4-211ENST00000498534 VASPP50552 380 aaPredicted RBP13.88□□□□□ -0.19
CNOT4-211ENST00000498534 HIC1Q14526 733 aa13.88□□□□□ -0.19
CNOT4-211ENST00000498534 MBTPS1Q14703 1052 aa13.88□□□□□ -0.19
CNOT4-211ENST00000498534 TCTN1Q2MV58 587 aa13.88□□□□□ -0.19
CNOT4-211ENST00000498534 XRRA1Q6P2D8 792 aa13.88□□□□□ -0.19
CNOT4-211ENST00000498534 METTL7BQ6UX53 244 aa13.88□□□□□ -0.19
CNOT4-211ENST00000498534 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.88□□□□□ -0.19
CNOT4-211ENST00000498534 CYFIP1Q7L576 1253 aa13.88□□□□□ -0.19
CNOT4-211ENST00000498534 SPRED2Q7Z698 418 aa13.88□□□□□ -0.19
CNOT4-211ENST00000498534 MYOCDQ8IZQ8 938 aa13.88□□□□□ -0.19
CNOT4-211ENST00000498534 TMTC2Q8N394 836 aa13.88□□□□□ -0.19
CNOT4-211ENST00000498534 GIMAP8Q8ND71 665 aaPredicted RBP13.88□□□□□ -0.19
CNOT4-211ENST00000498534 IGDCC4Q8TDY8 1250 aa13.88□□□□□ -0.19
CNOT4-211ENST00000498534 GPKOWQ92917 476 aaPredicted RBP eCLIP13.88□□□□□ -0.192e-9■■■■■ 29.7
CNOT4-211ENST00000498534 INPP4AQ96PE3 977 aaPredicted RBP13.88□□□□□ -0.19
CNOT4-211ENST00000498534 MAP3K14Q99558 947 aa13.88□□□□□ -0.19
CNOT4-211ENST00000498534 LZTS2Q9BRK4 669 aa13.88□□□□□ -0.19
CNOT4-211ENST00000498534 SENP2Q9HC62 589 aa13.88□□□□□ -0.19
CNOT4-211ENST00000498534 SEC63Q9UGP8 760 aaKnown RBP13.88□□□□□ -0.19
CNOT4-211ENST00000498534 ZNF215Q9UL58 517 aaPredicted RBP13.88□□□□□ -0.19
CNOT4-211ENST00000498534 TREHO43280 583 aa13.87□□□□□ -0.19
CNOT4-211ENST00000498534 SMARCA1P28370 1054 aa13.87□□□□□ -0.19
CNOT4-211ENST00000498534 GNAQP50148 359 aa13.87□□□□□ -0.19
CNOT4-211ENST00000498534 MRPS9P82933 396 aaKnown RBP13.87□□□□□ -0.19
CNOT4-211ENST00000498534 PLEKHG4Q58EX7 1191 aa13.87□□□□□ -0.19
CNOT4-211ENST00000498534 CASC1Q6TDU7 716 aa13.87□□□□□ -0.19
CNOT4-211ENST00000498534 NLRX1Q86UT6 975 aa13.87□□□□□ -0.19
CNOT4-211ENST00000498534 GDPD5Q8WTR4 605 aa13.87□□□□□ -0.19
CNOT4-211ENST00000498534 MAP4K1Q92918 833 aa13.87□□□□□ -0.19
CNOT4-211ENST00000498534 SENP7Q9BQF6 1050 aa13.87□□□□□ -0.19
CNOT4-211ENST00000498534 BCAS3Q9H6U6 928 aa13.87□□□□□ -0.19
CNOT4-211ENST00000498534 SETD4Q9NVD3 440 aa13.87□□□□□ -0.19
CNOT4-211ENST00000498534 SUPT16HQ9Y5B9 1047 aaKnown RBP13.87□□□□□ -0.19
CNOT4-211ENST00000498534 SGSM2O43147 1006 aa13.86□□□□□ -0.19
CNOT4-211ENST00000498534 UTP14CQ5TAP6 766 aaKnown RBP13.86□□□□□ -0.19
CNOT4-211ENST00000498534 PCNX4Q63HM2 1172 aa13.86□□□□□ -0.19
CNOT4-211ENST00000498534 NFXL1Q6ZNB6 911 aa13.86□□□□□ -0.19
CNOT4-211ENST00000498534 FBXO22Q8NEZ5 403 aa13.86□□□□□ -0.19
CNOT4-211ENST00000498534 SAMD11Q96NU1 681 aa13.86□□□□□ -0.19
CNOT4-211ENST00000498534 GPR20Q99678 358 aa13.86□□□□□ -0.19
CNOT4-211ENST00000498534 SPZ1Q9BXG8 430 aa13.86□□□□□ -0.19
CNOT4-211ENST00000498534 PTPRSQ13332 1948 aa13.86□□□□□ -0.19
CNOT4-211ENST00000498534 PIK3CDO00329 1044 aa13.85□□□□□ -0.19
CNOT4-211ENST00000498534 DDAH1O94760 285 aa13.85□□□□□ -0.19
CNOT4-211ENST00000498534 HOXC8P31273 242 aa13.85□□□□□ -0.19
CNOT4-211ENST00000498534 MCM5P33992 734 aa13.85□□□□□ -0.19
CNOT4-211ENST00000498534 CLCN6P51797 869 aa13.85□□□□□ -0.19
CNOT4-211ENST00000498534 HTRA4P83105 476 aaPredicted RBP13.85□□□□□ -0.19
CNOT4-211ENST00000498534 PTPROQ16827 1216 aa13.85□□□□□ -0.19
CNOT4-211ENST00000498534 USP17L6PQ6QN14 398 aa13.85□□□□□ -0.19
CNOT4-211ENST00000498534 ZNF654Q8IZM8 581 aa13.85□□□□□ -0.19
CNOT4-211ENST00000498534 TOP1MTQ969P6 601 aa13.85□□□□□ -0.19
CNOT4-211ENST00000498534 CDHR1Q96JP9 859 aa13.85□□□□□ -0.19
CNOT4-211ENST00000498534 PHF12Q96QT6 1004 aa13.85□□□□□ -0.19
CNOT4-211ENST00000498534 YME1L1Q96TA2 773 aa13.85□□□□□ -0.19
CNOT4-211ENST00000498534 MTA3Q9BTC8 594 aa13.85□□□□□ -0.19
CNOT4-211ENST00000498534 TAF6LQ9Y6J9 622 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms