RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 TRIOBPQ9H2D6 2365 aa6.38□□□□□ -1.39
HMGXB4-208ENST00000498325 NPIPB6E9PJ23 425 aa6.38□□□□□ -1.39
HMGXB4-208ENST00000498325 REC8O95072 547 aa6.38□□□□□ -1.39
HMGXB4-208ENST00000498325 CTSWP56202 376 aa6.38□□□□□ -1.39
HMGXB4-208ENST00000498325 TFCP2Q12800 502 aa6.38□□□□□ -1.39
HMGXB4-208ENST00000498325 CCDC152Q4G0S7 254 aa6.38□□□□□ -1.39
HMGXB4-208ENST00000498325 TNNI3KQ59H18 835 aa6.38□□□□□ -1.39
HMGXB4-208ENST00000498325 TBC1D9BQ66K14 1250 aa6.38□□□□□ -1.39
HMGXB4-208ENST00000498325 SPACA3Q8IXA5 215 aa6.38□□□□□ -1.39
HMGXB4-208ENST00000498325 TTLL11Q8NHH1 800 aa6.38□□□□□ -1.39
HMGXB4-208ENST00000498325 EAF2Q96CJ1 260 aaPredicted RBP6.38□□□□□ -1.39
HMGXB4-208ENST00000498325 SETDB2Q96T68 719 aa6.38□□□□□ -1.39
HMGXB4-208ENST00000498325 CCDC8Q9H0W5 538 aaPredicted RBP6.38□□□□□ -1.39
HMGXB4-208ENST00000498325 PRO3102Q9H379 93 aa6.38□□□□□ -1.39
HMGXB4-208ENST00000498325 KRT82Q9NSB4 513 aa6.38□□□□□ -1.39
HMGXB4-208ENST00000498325 PGAP2Q9UHJ9 254 aa6.38□□□□□ -1.39
HMGXB4-208ENST00000498325 FPGT-TNNI3KV9GXZ4 949 aa6.38□□□□□ -1.39
HMGXB4-208ENST00000498325 UBN2Q6ZU65 1347 aa6.37□□□□□ -1.39
HMGXB4-208ENST00000498325 HIP1O00291 1037 aa6.37□□□□□ -1.39
HMGXB4-208ENST00000498325 NTSR2O95665 410 aa6.37□□□□□ -1.39
HMGXB4-208ENST00000498325 GSTP1P09211 210 aaKnown RBP6.37□□□□□ -1.39
HMGXB4-208ENST00000498325 TMEM253P0C7T8 217 aa6.37□□□□□ -1.39
HMGXB4-208ENST00000498325 ZNF157P51786 506 aaPredicted RBP6.37□□□□□ -1.39
HMGXB4-208ENST00000498325 BECN1Q14457 450 aa6.37□□□□□ -1.39
HMGXB4-208ENST00000498325 RPS26P11Q5JNZ5 115 aaPredicted RBP6.37□□□□□ -1.39
HMGXB4-208ENST00000498325 TPTE2Q6XPS3 522 aa6.37□□□□□ -1.39
HMGXB4-208ENST00000498325 LDHAL6AQ6ZMR3 332 aa6.37□□□□□ -1.39
HMGXB4-208ENST00000498325 ATG9AQ7Z3C6 839 aa6.37□□□□□ -1.39
HMGXB4-208ENST00000498325 RUFY2Q8WXA3 655 aa6.37□□□□□ -1.39
HMGXB4-208ENST00000498325 ISL2Q96A47 359 aa6.37□□□□□ -1.39
HMGXB4-208ENST00000498325 EVI5LQ96CN4 794 aa6.37□□□□□ -1.39
HMGXB4-208ENST00000498325 MASTLQ96GX5 879 aa6.37□□□□□ -1.39
HMGXB4-208ENST00000498325 NEUROD6Q96NK8 337 aa6.37□□□□□ -1.39
HMGXB4-208ENST00000498325 DIRC2Q96SL1 478 aa6.37□□□□□ -1.39
HMGXB4-208ENST00000498325 NSUN3Q9H649 340 aaKnown RBP6.37□□□□□ -1.39
HMGXB4-208ENST00000498325 CNNM1Q9NRU3 951 aa6.37□□□□□ -1.39
HMGXB4-208ENST00000498325 BCORQ6W2J9 1755 aa6.36□□□□□ -1.39
HMGXB4-208ENST00000498325 IGF2BP3O00425 579 aaKnown RBP eCLIP6.36□□□□□ -1.39
HMGXB4-208ENST00000498325 EPB41L2O43491 1005 aaKnown RBP6.36□□□□□ -1.39
HMGXB4-208ENST00000498325 ATP5JP18859 108 aa6.36□□□□□ -1.39
HMGXB4-208ENST00000498325 MCCP23508 829 aa6.36□□□□□ -1.39
HMGXB4-208ENST00000498325 CHMLP26374 656 aa6.36□□□□□ -1.39
HMGXB4-208ENST00000498325 IGHMBP2P38935 993 aaKnown RBP6.36□□□□□ -1.39
HMGXB4-208ENST00000498325 RBM25P49756 843 aaKnown RBP6.36□□□□□ -1.39
HMGXB4-208ENST00000498325 EIF6P56537 245 aaKnown RBP6.36□□□□□ -1.39
HMGXB4-208ENST00000498325 LRRC24Q50LG9 513 aa6.36□□□□□ -1.39
HMGXB4-208ENST00000498325 METTL24Q5JXM2 366 aa6.36□□□□□ -1.39
HMGXB4-208ENST00000498325 CCDC158Q5M9N0 1113 aa6.36□□□□□ -1.39
HMGXB4-208ENST00000498325 SLC10A5Q5PT55 438 aa6.36□□□□□ -1.39
HMGXB4-208ENST00000498325 GORABQ5T7V8 394 aa6.36□□□□□ -1.39
HMGXB4-208ENST00000498325 TSHZ3Q63HK5 1081 aa6.36□□□□□ -1.39
HMGXB4-208ENST00000498325 FAM214BQ7L5A3 538 aa6.36□□□□□ -1.39
HMGXB4-208ENST00000498325 USP48Q86UV5 1035 aa6.36□□□□□ -1.39
HMGXB4-208ENST00000498325 TICAM2Q86XR7 235 aa6.36□□□□□ -1.39
HMGXB4-208ENST00000498325 MPHOSPH8Q99549 860 aa6.36□□□□□ -1.39
HMGXB4-208ENST00000498325 R3HDMLQ9H3Y0 253 aa6.36□□□□□ -1.39
HMGXB4-208ENST00000498325 GREM2Q9H772 168 aa6.36□□□□□ -1.39
HMGXB4-208ENST00000498325 ADARB2Q9NS39 739 aaKnown RBP6.36□□□□□ -1.39
HMGXB4-208ENST00000498325 GPRC5DQ9NZD1 345 aa6.36□□□□□ -1.39
HMGXB4-208ENST00000498325 MYH3P11055 1940 aa6.36□□□□□ -1.39
HMGXB4-208ENST00000498325 CACNA1SQ13698 1873 aa6.36□□□□□ -1.39
HMGXB4-208ENST00000498325 PAPPA2Q9BXP8 1791 aa6.36□□□□□ -1.39
HMGXB4-208ENST00000498325 SNED1Q8TER0 1413 aa6.35□□□□□ -1.39
HMGXB4-208ENST00000498325 HTTP42858 3142 aa6.35□□□□□ -1.39
HMGXB4-208ENST00000498325 RTL9Q8NET4 1388 aa6.35□□□□□ -1.39
HMGXB4-208ENST00000498325 MROH5Q6ZUA9 1318 aa6.35□□□□□ -1.39
HMGXB4-208ENST00000498325 NPHP1O15259 732 aa6.35□□□□□ -1.39
HMGXB4-208ENST00000498325 PLA2G5P39877 138 aa6.35□□□□□ -1.39
HMGXB4-208ENST00000498325 SF3B3Q15393 1217 aaKnown RBP6.35□□□□□ -1.39
HMGXB4-208ENST00000498325 KCNA10Q16322 511 aa6.35□□□□□ -1.39
HMGXB4-208ENST00000498325 NKPD1Q17RQ9 610 aa6.35□□□□□ -1.39
HMGXB4-208ENST00000498325 LRRFIP1Q32MZ4 808 aaKnown RBP6.35□□□□□ -1.39
HMGXB4-208ENST00000498325 CDC37L1Q7L3B6 337 aa6.35□□□□□ -1.39
HMGXB4-208ENST00000498325 NBPF5PQ86XG9 351 aaPredicted RBP6.35□□□□□ -1.39
HMGXB4-208ENST00000498325 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.35□□□□□ -1.39
HMGXB4-208ENST00000498325 JDP2Q8WYK2 163 aa6.35□□□□□ -1.39
HMGXB4-208ENST00000498325 CDC5LQ99459 802 aaKnown RBP6.35□□□□□ -1.39
HMGXB4-208ENST00000498325 PUS3Q9BZE2 481 aaKnown RBP6.35□□□□□ -1.39
HMGXB4-208ENST00000498325 BOLA2Q9H3K6 86 aa6.35□□□□□ -1.39
HMGXB4-208ENST00000498325 ABCB6Q9NP58 842 aa6.35□□□□□ -1.39
HMGXB4-208ENST00000498325 DIAPH3Q9NSV4 1193 aa6.35□□□□□ -1.39
HMGXB4-208ENST00000498325 RIPOR2Q9Y4F9 1068 aa6.35□□□□□ -1.39
HMGXB4-208ENST00000498325 LAMA3Q16787 3333 aa6.35□□□□□ -1.39
HMGXB4-208ENST00000498325 SCN7AQ01118 1682 aa6.34□□□□□ -1.39
HMGXB4-208ENST00000498325 A0A1B0GUL7 405 aa6.34□□□□□ -1.39
HMGXB4-208ENST00000498325 SHTN1A0MZ66 631 aa6.34□□□□□ -1.39
HMGXB4-208ENST00000498325 PDE8BO95263 885 aa6.34□□□□□ -1.39
HMGXB4-208ENST00000498325 MAP4K4O95819 1239 aaPredicted RBP6.34□□□□□ -1.39
HMGXB4-208ENST00000498325 IFIT1P09914 478 aaKnown RBP6.34□□□□□ -1.39
HMGXB4-208ENST00000498325 CLCN7P51798 805 aa6.34□□□□□ -1.39
HMGXB4-208ENST00000498325 TIMM10P62072 90 aa6.34□□□□□ -1.39
HMGXB4-208ENST00000498325 FAAP100Q0VG06 881 aa6.34□□□□□ -1.39
HMGXB4-208ENST00000498325 TTC39AQ5SRH9 613 aa6.34□□□□□ -1.39
HMGXB4-208ENST00000498325 Q7L0L9 218 aa6.34□□□□□ -1.39
HMGXB4-208ENST00000498325 RTKN2Q8IZC4 609 aa6.34□□□□□ -1.39
HMGXB4-208ENST00000498325 RNF214Q8ND24 703 aa6.34□□□□□ -1.39
HMGXB4-208ENST00000498325 KCNB2Q92953 911 aa6.34□□□□□ -1.39
HMGXB4-208ENST00000498325 CARS2Q9HA77 564 aaKnown RBP6.34□□□□□ -1.39
HMGXB4-208ENST00000498325 GBA2Q9HCG7 927 aaPredicted RBP6.34□□□□□ -1.39
HMGXB4-208ENST00000498325 NPHS2Q9NP85 383 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms