RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 ORC2Q13416 577 aaPredicted RBP12.94□□□□□ -0.34
CTTN-208ENST00000498223 STK38Q15208 465 aa12.94□□□□□ -0.34
CTTN-208ENST00000498223 SF3A1Q15459 793 aaKnown RBP12.94□□□□□ -0.34
CTTN-208ENST00000498223 DUSP28Q4G0W2 176 aa12.94□□□□□ -0.34
CTTN-208ENST00000498223 MAP3K21Q5TCX8 1036 aa12.94□□□□□ -0.34
CTTN-208ENST00000498223 LRCH2Q5VUJ6 765 aa12.94□□□□□ -0.34
CTTN-208ENST00000498223 CYFIP1Q7L576 1253 aa12.94□□□□□ -0.34
CTTN-208ENST00000498223 TLK2Q86UE8 772 aa12.94□□□□□ -0.34
CTTN-208ENST00000498223 SLFN12Q8IYM2 578 aa12.94□□□□□ -0.34
CTTN-208ENST00000498223 COPS5Q92905 334 aa12.94□□□□□ -0.34
CTTN-208ENST00000498223 LENG1Q96BZ8 264 aaPredicted RBP12.94□□□□□ -0.34
CTTN-208ENST00000498223 TEKT3Q9BXF9 490 aa12.94□□□□□ -0.34
CTTN-208ENST00000498223 SPC25Q9HBM1 224 aa12.94□□□□□ -0.34
CTTN-208ENST00000498223 DDX20Q9UHI6 824 aaKnown RBP12.94□□□□□ -0.34
CTTN-208ENST00000498223 NOP56O00567 594 aaKnown RBP12.93□□□□□ -0.34
CTTN-208ENST00000498223 MSCO60682 206 aa12.93□□□□□ -0.34
CTTN-208ENST00000498223 GAS7O60861 476 aa12.93□□□□□ -0.34
CTTN-208ENST00000498223 ATP9AO75110 1047 aa12.93□□□□□ -0.34
CTTN-208ENST00000498223 DUSP11O75319 330 aaKnown RBP12.93□□□□□ -0.34
CTTN-208ENST00000498223 BMP15O95972 392 aa12.93□□□□□ -0.34
CTTN-208ENST00000498223 OR52Z1P0C646 297 aa12.93□□□□□ -0.34
CTTN-208ENST00000498223 UBA1P22314 1058 aaKnown RBP12.93□□□□□ -0.34
CTTN-208ENST00000498223 TXKP42681 527 aa12.93□□□□□ -0.34
CTTN-208ENST00000498223 DNM1Q05193 864 aaKnown RBP12.93□□□□□ -0.34
CTTN-208ENST00000498223 PTGDRQ13258 359 aa12.93□□□□□ -0.34
CTTN-208ENST00000498223 SEMA3FQ13275 785 aa12.93□□□□□ -0.34
CTTN-208ENST00000498223 CELF3Q5SZQ8 465 aaKnown RBP12.93□□□□□ -0.34
CTTN-208ENST00000498223 TMEM63BQ5T3F8 832 aa12.93□□□□□ -0.34
CTTN-208ENST00000498223 CCDC62Q6P9F0 684 aa12.93□□□□□ -0.34
CTTN-208ENST00000498223 GJA10Q969M2 543 aa12.93□□□□□ -0.34
CTTN-208ENST00000498223 LENG9Q96B70 501 aa12.93□□□□□ -0.34
CTTN-208ENST00000498223 FAM20AQ96MK3 541 aa12.93□□□□□ -0.34
CTTN-208ENST00000498223 SPATA33Q96N06 139 aa12.93□□□□□ -0.34
CTTN-208ENST00000498223 MBOAT7Q96N66 472 aa12.93□□□□□ -0.34
CTTN-208ENST00000498223 XPNPEP3Q9NQH7 507 aa12.93□□□□□ -0.34
CTTN-208ENST00000498223 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.93□□□□□ -0.34
CTTN-208ENST00000498223 TBC1D22BQ9NU19 505 aa12.93□□□□□ -0.34
CTTN-208ENST00000498223 SLC9A2Q9UBY0 812 aa12.93□□□□□ -0.34
CTTN-208ENST00000498223 CFAP45Q9UL16 551 aa12.93□□□□□ -0.34
CTTN-208ENST00000498223 CLIC4Q9Y696 253 aa12.93□□□□□ -0.34
CTTN-208ENST00000498223 TBX3O15119 743 aa12.92□□□□□ -0.34
CTTN-208ENST00000498223 ADCY6O43306 1168 aa12.92□□□□□ -0.34
CTTN-208ENST00000498223 CHMP2AO43633 222 aa12.92□□□□□ -0.34
CTTN-208ENST00000498223 C6orf222P0C671 652 aaPredicted RBP12.92□□□□□ -0.34
CTTN-208ENST00000498223 KCNA2P16389 499 aa12.92□□□□□ -0.34
CTTN-208ENST00000498223 CAPN2P17655 700 aa12.92□□□□□ -0.34
CTTN-208ENST00000498223 PTGS1P23219 599 aa12.92□□□□□ -0.34
CTTN-208ENST00000498223 KRT85P78386 507 aa12.92□□□□□ -0.34
CTTN-208ENST00000498223 SP2Q02086 613 aa12.92□□□□□ -0.34
CTTN-208ENST00000498223 LAMC2Q13753 1193 aa12.92□□□□□ -0.34
CTTN-208ENST00000498223 TMEM266Q2M3C6 531 aa12.92□□□□□ -0.34
CTTN-208ENST00000498223 BRDTQ58F21 947 aaPredicted RBP12.92□□□□□ -0.34
CTTN-208ENST00000498223 HABP4Q5JVS0 413 aaKnown RBP12.92□□□□□ -0.34
CTTN-208ENST00000498223 ATL3Q6DD88 541 aa12.92□□□□□ -0.34
CTTN-208ENST00000498223 UBE2Q1Q7Z7E8 422 aa12.92□□□□□ -0.34
CTTN-208ENST00000498223 ETNPPLQ8TBG4 499 aa12.92□□□□□ -0.34
CTTN-208ENST00000498223 U2AF1L4Q8WU68 220 aaKnown RBP12.92□□□□□ -0.34
CTTN-208ENST00000498223 SLC5A5Q92911 643 aa12.92□□□□□ -0.34
CTTN-208ENST00000498223 DEFB118Q96PH6 123 aa12.92□□□□□ -0.34
CTTN-208ENST00000498223 USP28Q96RU2 1077 aa12.92□□□□□ -0.34
CTTN-208ENST00000498223 RIT2Q99578 217 aa12.92□□□□□ -0.34
CTTN-208ENST00000498223 SENP7Q9BQF6 1050 aa12.92□□□□□ -0.34
CTTN-208ENST00000498223 FTOQ9C0B1 505 aaKnown RBP eCLIP12.92□□□□□ -0.34
CTTN-208ENST00000498223 TMEM60Q9H2L4 133 aa12.92□□□□□ -0.34
CTTN-208ENST00000498223 JPH1Q9HDC5 661 aaPredicted RBP12.92□□□□□ -0.34
CTTN-208ENST00000498223 PCDHA12Q9UN75 941 aa12.92□□□□□ -0.34
CTTN-208ENST00000498223 SAMM50Q9Y512 469 aa12.92□□□□□ -0.34
CTTN-208ENST00000498223 NFASCO94856 1347 aa12.91□□□□□ -0.34
CTTN-208ENST00000498223 LAD1O00515 517 aa12.91□□□□□ -0.34
CTTN-208ENST00000498223 ZEB2O60315 1214 aa12.91□□□□□ -0.34
CTTN-208ENST00000498223 PGK1P00558 417 aa12.91□□□□□ -0.34
CTTN-208ENST00000498223 TFRCP02786 760 aaKnown RBP12.91□□□□□ -0.34
CTTN-208ENST00000498223 ITGB3BPQ13352 177 aaPredicted RBP12.91□□□□□ -0.34
CTTN-208ENST00000498223 NCAPH2Q6IBW4 605 aa12.91□□□□□ -0.34
CTTN-208ENST00000498223 METTL7BQ6UX53 244 aa12.91□□□□□ -0.34
CTTN-208ENST00000498223 AFG1LQ8WV93 481 aa12.91□□□□□ -0.34
CTTN-208ENST00000498223 TTC12Q9H892 705 aaPredicted RBP12.91□□□□□ -0.34
CTTN-208ENST00000498223 KCNMB3Q9NPA1 279 aa12.91□□□□□ -0.34
CTTN-208ENST00000498223 PCDH10Q9P2E7 1040 aa12.91□□□□□ -0.34
CTTN-208ENST00000498223 GNEQ9Y223 722 aaKnown RBP12.91□□□□□ -0.34
CTTN-208ENST00000498223 Q9Y3F1 56 aa12.91□□□□□ -0.34
CTTN-208ENST00000498223 LOXHD1Q8IVV2 1947 aa12.9□□□□□ -0.34
CTTN-208ENST00000498223 PSMD10O75832 226 aa12.9□□□□□ -0.34
CTTN-208ENST00000498223 FARP2O94887 1054 aaPredicted RBP12.9□□□□□ -0.34
CTTN-208ENST00000498223 SGPL1O95470 568 aa12.9□□□□□ -0.34
CTTN-208ENST00000498223 MYL3P08590 195 aa12.9□□□□□ -0.34
CTTN-208ENST00000498223 MARCKSP29966 332 aaPredicted RBP12.9□□□□□ -0.34
CTTN-208ENST00000498223 TECP42680 631 aa12.9□□□□□ -0.34
CTTN-208ENST00000498223 CPT1AP50416 773 aa12.9□□□□□ -0.34
CTTN-208ENST00000498223 KRT76Q01546 638 aa12.9□□□□□ -0.34
CTTN-208ENST00000498223 ARHGAP1Q07960 439 aa12.9□□□□□ -0.34
CTTN-208ENST00000498223 GNASQ5JWF2 1037 aa12.9□□□□□ -0.34
CTTN-208ENST00000498223 MIS18BP1Q6P0N0 1132 aa12.9□□□□□ -0.34
CTTN-208ENST00000498223 DTHD1Q6ZMT9 781 aa12.9□□□□□ -0.34
CTTN-208ENST00000498223 MIER3Q7Z3K6 550 aa12.9□□□□□ -0.34
CTTN-208ENST00000498223 RNF180Q86T96 592 aa12.9□□□□□ -0.34
CTTN-208ENST00000498223 ARRDC4Q8NCT1 418 aa12.9□□□□□ -0.34
CTTN-208ENST00000498223 HAS1Q92839 578 aa12.9□□□□□ -0.34
CTTN-208ENST00000498223 MTMR9Q96QG7 549 aa12.9□□□□□ -0.34
CTTN-208ENST00000498223 RAB34Q9BZG1 259 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms