RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 JPH1Q9HDC5 661 aaPredicted RBP15.33■□□□□ 0.04
CPNE1-227ENST00000498056 CFAP45Q9UL16 551 aa15.33■□□□□ 0.04
CPNE1-227ENST00000498056 FAM184BQ9ULE4 1060 aa15.33■□□□□ 0.04
CPNE1-227ENST00000498056 RBM47A0AV96 593 aaKnown RBP15.32■□□□□ 0.04
CPNE1-227ENST00000498056 SEPT4O43236 478 aa15.32■□□□□ 0.04
CPNE1-227ENST00000498056 ATP9AO75110 1047 aa15.32■□□□□ 0.04
CPNE1-227ENST00000498056 GH1P01241 217 aa15.32■□□□□ 0.04
CPNE1-227ENST00000498056 SMPD1P17405 629 aa15.32■□□□□ 0.04
CPNE1-227ENST00000498056 MARCKSP29966 332 aaPredicted RBP15.32■□□□□ 0.04
CPNE1-227ENST00000498056 NEDD9Q14511 834 aa15.32■□□□□ 0.04
CPNE1-227ENST00000498056 PTPAQ15257 358 aa15.32■□□□□ 0.04
CPNE1-227ENST00000498056 ATL3Q6DD88 541 aa15.32■□□□□ 0.04
CPNE1-227ENST00000498056 NCAPH2Q6IBW4 605 aa15.32■□□□□ 0.04
CPNE1-227ENST00000498056 DHX37Q8IY37 1157 aaKnown RBP15.32■□□□□ 0.04
CPNE1-227ENST00000498056 HAS1Q92839 578 aa15.32■□□□□ 0.04
CPNE1-227ENST00000498056 SLC5A5Q92911 643 aa15.32■□□□□ 0.04
CPNE1-227ENST00000498056 SPATA32Q96LK8 384 aa15.32■□□□□ 0.04
CPNE1-227ENST00000498056 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.32■□□□□ 0.04
CPNE1-227ENST00000498056 HMX1Q9NP08 348 aaPredicted RBP15.32■□□□□ 0.04
CPNE1-227ENST00000498056 DDX41Q9UJV9 622 aaKnown RBP15.32■□□□□ 0.04
CPNE1-227ENST00000498056 NFASCO94856 1347 aa15.32■□□□□ 0.04
CPNE1-227ENST00000498056 VWA3AA6NCI4 1184 aa15.31■□□□□ 0.04
CPNE1-227ENST00000498056 POTEMA6NI47 508 aa15.31■□□□□ 0.04
CPNE1-227ENST00000498056 NOP56O00567 594 aaKnown RBP15.31■□□□□ 0.04
CPNE1-227ENST00000498056 NKRFO15226 690 aaKnown RBP eCLIP15.31■□□□□ 0.04
CPNE1-227ENST00000498056 SPTLC2O15270 562 aa15.31■□□□□ 0.04
CPNE1-227ENST00000498056 MAFGO15525 162 aa15.31■□□□□ 0.04
CPNE1-227ENST00000498056 FARP2O94887 1054 aaPredicted RBP15.31■□□□□ 0.04
CPNE1-227ENST00000498056 TGFB3P10600 412 aa15.31■□□□□ 0.04
CPNE1-227ENST00000498056 RARBP10826 455 aa15.31■□□□□ 0.04
CPNE1-227ENST00000498056 SP2Q02086 613 aa15.31■□□□□ 0.04
CPNE1-227ENST00000498056 DUSP28Q4G0W2 176 aa15.31■□□□□ 0.04
CPNE1-227ENST00000498056 IQSEC1Q6DN90 963 aa15.31■□□□□ 0.04
CPNE1-227ENST00000498056 CCDC62Q6P9F0 684 aa15.31■□□□□ 0.04
CPNE1-227ENST00000498056 CYFIP1Q7L576 1253 aa15.31■□□□□ 0.04
CPNE1-227ENST00000498056 LINC00301Q8NCQ3 95 aa15.31■□□□□ 0.04
CPNE1-227ENST00000498056 GIMAP8Q8ND71 665 aaPredicted RBP15.31■□□□□ 0.04
CPNE1-227ENST00000498056 FAM20AQ96MK3 541 aa15.31■□□□□ 0.04
CPNE1-227ENST00000498056 MTMR9Q96QG7 549 aa15.31■□□□□ 0.04
CPNE1-227ENST00000498056 MCOLN1Q9GZU1 580 aa15.31■□□□□ 0.04
CPNE1-227ENST00000498056 UNC93B1Q9H1C4 597 aa15.31■□□□□ 0.04
CPNE1-227ENST00000498056 TTC12Q9H892 705 aaPredicted RBP15.31■□□□□ 0.04
CPNE1-227ENST00000498056 MLXIPQ9HAP2 919 aa15.31■□□□□ 0.04
CPNE1-227ENST00000498056 SLC9A2Q9UBY0 812 aa15.31■□□□□ 0.04
CPNE1-227ENST00000498056 DDX20Q9UHI6 824 aaKnown RBP15.31■□□□□ 0.04
CPNE1-227ENST00000498056 MYH11P35749 1972 aa15.31■□□□□ 0.04
CPNE1-227ENST00000498056 PSMD10O75832 226 aa15.3■□□□□ 0.04
CPNE1-227ENST00000498056 ELP1O95163 1332 aa15.3■□□□□ 0.04
CPNE1-227ENST00000498056 MYCNP04198 464 aaPredicted RBP15.3■□□□□ 0.04
CPNE1-227ENST00000498056 PRPHP41219 470 aa15.3■□□□□ 0.04
CPNE1-227ENST00000498056 TECP42680 631 aa15.3■□□□□ 0.04
CPNE1-227ENST00000498056 KRT76Q01546 638 aa15.3■□□□□ 0.04
CPNE1-227ENST00000498056 ARHGAP1Q07960 439 aa15.3■□□□□ 0.04
CPNE1-227ENST00000498056 MTFR1Q15390 333 aa15.3■□□□□ 0.04
CPNE1-227ENST00000498056 TPRNQ4KMQ1 711 aa15.3■□□□□ 0.04
CPNE1-227ENST00000498056 CELF3Q5SZQ8 465 aaKnown RBP15.3■□□□□ 0.04
CPNE1-227ENST00000498056 METTL7BQ6UX53 244 aa15.3■□□□□ 0.04
CPNE1-227ENST00000498056 DTHD1Q6ZMT9 781 aa15.3■□□□□ 0.04
CPNE1-227ENST00000498056 C4orf32Q8N8J7 132 aa15.3■□□□□ 0.04
CPNE1-227ENST00000498056 KCNG4Q8TDN1 519 aa15.3■□□□□ 0.04
CPNE1-227ENST00000498056 RIT2Q99578 217 aa15.3■□□□□ 0.04
CPNE1-227ENST00000498056 SENP7Q9BQF6 1050 aa15.3■□□□□ 0.04
CPNE1-227ENST00000498056 AP5M1Q9H0R1 490 aa15.3■□□□□ 0.04
CPNE1-227ENST00000498056 UNC45AQ9H3U1 944 aa15.3■□□□□ 0.04
CPNE1-227ENST00000498056 BCAS3Q9H6U6 928 aa15.3■□□□□ 0.04
CPNE1-227ENST00000498056 TBC1D22BQ9NU19 505 aa15.3■□□□□ 0.04
CPNE1-227ENST00000498056 VAV3Q9UKW4 847 aa15.3■□□□□ 0.04
CPNE1-227ENST00000498056 SYNRGQ9UMZ2 1314 aa15.3■□□□□ 0.04
CPNE1-227ENST00000498056 SAMM50Q9Y512 469 aa15.3■□□□□ 0.04
CPNE1-227ENST00000498056 CCL5P13501 91 aa15.29■□□□□ 0.04
CPNE1-227ENST00000498056 ME1P48163 572 aa15.29■□□□□ 0.04
CPNE1-227ENST00000498056 SLC39A14Q15043 492 aa15.29■□□□□ 0.04
CPNE1-227ENST00000498056 ARL6IP4Q66PJ3 421 aaKnown RBP15.29■□□□□ 0.04
CPNE1-227ENST00000498056 MIER3Q7Z3K6 550 aa15.29■□□□□ 0.04
CPNE1-227ENST00000498056 LEO1Q8WVC0 666 aaPredicted RBP15.29■□□□□ 0.04
CPNE1-227ENST00000498056 ZNF333Q96JL9 665 aa15.29■□□□□ 0.04
CPNE1-227ENST00000498056 SPATA33Q96N06 139 aa15.29■□□□□ 0.04
CPNE1-227ENST00000498056 GBP4Q96PP9 640 aa15.29■□□□□ 0.04
CPNE1-227ENST00000498056 RAB34Q9BZG1 259 aa15.29■□□□□ 0.04
CPNE1-227ENST00000498056 SCAND2PQ9GZW5 306 aaPredicted RBP15.29■□□□□ 0.04
CPNE1-227ENST00000498056 XPNPEP3Q9NQH7 507 aa15.29■□□□□ 0.04
CPNE1-227ENST00000498056 FBXO2Q9UK22 296 aaPredicted RBP15.29■□□□□ 0.04
CPNE1-227ENST00000498056 PCDHA12Q9UN75 941 aa15.29■□□□□ 0.04
CPNE1-227ENST00000498056 GNEQ9Y223 722 aaKnown RBP15.29■□□□□ 0.04
CPNE1-227ENST00000498056 SCN10AQ9Y5Y9 1956 aa15.29■□□□□ 0.04
CPNE1-227ENST00000498056 WDR64B1ANS9 1081 aa15.28■□□□□ 0.04
CPNE1-227ENST00000498056 DHX15O43143 795 aaKnown RBP15.28■□□□□ 0.04
CPNE1-227ENST00000498056 DYNC1LI2O43237 492 aaPredicted RBP15.28■□□□□ 0.04
CPNE1-227ENST00000498056 MSCO60682 206 aa15.28■□□□□ 0.04
CPNE1-227ENST00000498056 DUSP11O75319 330 aaKnown RBP15.28■□□□□ 0.04
CPNE1-227ENST00000498056 CCNE2O96020 404 aa15.28■□□□□ 0.04
CPNE1-227ENST00000498056 C6orf222P0C671 652 aaPredicted RBP15.28■□□□□ 0.04
CPNE1-227ENST00000498056 FXR2P51116 673 aaKnown RBP eCLIP15.28■□□□□ 0.04
CPNE1-227ENST00000498056 JAK3P52333 1124 aa15.28■□□□□ 0.04
CPNE1-227ENST00000498056 GRIN1Q05586 938 aa15.28■□□□□ 0.04
CPNE1-227ENST00000498056 PPP2R5CQ13362 524 aa15.28■□□□□ 0.04
CPNE1-227ENST00000498056 ZNF746Q6NUN9 644 aaPredicted RBP15.28■□□□□ 0.04
CPNE1-227ENST00000498056 KRI1Q8N9T8 703 aaKnown RBP15.28■□□□□ 0.04
CPNE1-227ENST00000498056 AFG1LQ8WV93 481 aa15.28■□□□□ 0.04
CPNE1-227ENST00000498056 FERMT2Q96AC1 680 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms