RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 STX17P56962 302 aa9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 RPS6P62753 249 aaKnown RBP9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 IRX3P78415 501 aaPredicted RBP9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 FANCCQ00597 558 aa9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 PPATQ06203 517 aa9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 PDE4DQ08499 809 aa9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 SEMA3FQ13275 785 aa9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 PPIL2Q13356 520 aa9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 PLS1Q14651 629 aa9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 COG2Q14746 738 aa9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 TPD52L1Q16890 204 aaPredicted RBP9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 TKFCQ3LXA3 575 aa9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 CEP55Q53EZ4 464 aa9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 TREML2Q5T2D2 321 aa9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 ASTLQ6HA08 431 aaPredicted RBP9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 CNNM4Q6P4Q7 775 aa9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 CATSPERGQ6ZRH7 1159 aa9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 ARMC9Q7Z3E5 817 aa9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 KCNK18Q7Z418 384 aa9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 PRRT2Q7Z6L0 340 aaPredicted RBP9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 PNMA8AQ86V59 439 aaPredicted RBP9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 ERO1BQ86YB8 467 aa9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 FAM43AQ8N2R8 423 aa9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 ENOX1Q8TC92 643 aaKnown RBP9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 SYTL5Q8TDW5 730 aaPredicted RBP9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 NELFBQ8WX92 580 aa9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 SLC5A5Q92911 643 aa9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 CLMNQ96JQ2 1002 aa9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 C7orf25Q9BPX7 421 aa9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 NUDT12Q9BQG2 462 aa9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 ZNF577Q9BSK1 485 aa9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 GTPBP4Q9BZE4 634 aaKnown RBP9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 WDR11Q9BZH6 1224 aa9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 XPO4Q9C0E2 1151 aaKnown RBP9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 IFNKQ9P0W0 207 aa9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 TCEAL9Q9UHQ7 104 aa9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 ZKSCAN5Q9Y2L8 839 aa9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.03□□□□□ -0.96
PDZRN3-212ENST00000498048 DOCK3Q8IZD9 2030 aa9.02□□□□□ -0.97
PDZRN3-212ENST00000498048 EVPLQ92817 2033 aa9.02□□□□□ -0.97
PDZRN3-212ENST00000498048 MYMKA6NI61 221 aa9.02□□□□□ -0.97
PDZRN3-212ENST00000498048 PSMA7O14818 248 aa9.02□□□□□ -0.97
PDZRN3-212ENST00000498048 ATP2A1O14983 1001 aa9.02□□□□□ -0.97
PDZRN3-212ENST00000498048 MED24O75448 989 aa9.02□□□□□ -0.97
PDZRN3-212ENST00000498048 PTGS1P23219 599 aa9.02□□□□□ -0.97
PDZRN3-212ENST00000498048 CCND2P30279 289 aa9.02□□□□□ -0.97
PDZRN3-212ENST00000498048 PPP1R2P41236 205 aa9.02□□□□□ -0.97
PDZRN3-212ENST00000498048 PPP2R5CQ13362 524 aa9.02□□□□□ -0.97
PDZRN3-212ENST00000498048 TMEM132BQ14DG7 1078 aa9.02□□□□□ -0.97
PDZRN3-212ENST00000498048 PGM5Q15124 567 aa9.02□□□□□ -0.97
PDZRN3-212ENST00000498048 HSP90AA4PQ58FG1 418 aa9.02□□□□□ -0.97
PDZRN3-212ENST00000498048 PCNX4Q63HM2 1172 aa9.02□□□□□ -0.97
PDZRN3-212ENST00000498048 MOB2Q70IA6 237 aa9.02□□□□□ -0.97
PDZRN3-212ENST00000498048 UNC13DQ70J99 1090 aa9.02□□□□□ -0.97
PDZRN3-212ENST00000498048 NIPA1Q7RTP0 329 aa9.02□□□□□ -0.97
PDZRN3-212ENST00000498048 GPBP1Q86WP2 473 aa9.02□□□□□ -0.97
PDZRN3-212ENST00000498048 FBXO22Q8NEZ5 403 aa9.02□□□□□ -0.97
PDZRN3-212ENST00000498048 CYP2W1Q8TAV3 490 aa9.02□□□□□ -0.97
PDZRN3-212ENST00000498048 OPTNQ96CV9 577 aa9.02□□□□□ -0.97
PDZRN3-212ENST00000498048 TRIM47Q96LD4 638 aa9.02□□□□□ -0.97
PDZRN3-212ENST00000498048 MXRA8Q9BRK3 442 aa9.02□□□□□ -0.97
PDZRN3-212ENST00000498048 HSD3B7Q9H2F3 369 aa9.02□□□□□ -0.97
PDZRN3-212ENST00000498048 ZNF408Q9H9D4 720 aa9.02□□□□□ -0.97
PDZRN3-212ENST00000498048 PXMP2Q9NR77 195 aa9.02□□□□□ -0.97
PDZRN3-212ENST00000498048 FANCLQ9NW38 375 aa9.02□□□□□ -0.97
PDZRN3-212ENST00000498048 PKD2L1Q9P0L9 805 aa9.02□□□□□ -0.97
PDZRN3-212ENST00000498048 RWDD2AQ9UIY3 292 aa9.02□□□□□ -0.97
PDZRN3-212ENST00000498048 KIAA1024Q9UPX6 916 aa9.02□□□□□ -0.97
PDZRN3-212ENST00000498048 PPP1R3GB7ZBB8 358 aa9.01□□□□□ -0.97
PDZRN3-212ENST00000498048 E9PMD0 336 aa9.01□□□□□ -0.97
PDZRN3-212ENST00000498048 DDX39AO00148 427 aaKnown RBP9.01□□□□□ -0.97
PDZRN3-212ENST00000498048 IRF6O14896 467 aa9.01□□□□□ -0.97
PDZRN3-212ENST00000498048 PSMD10O75832 226 aa9.01□□□□□ -0.97
PDZRN3-212ENST00000498048 KRT18P05783 430 aaKnown RBP9.01□□□□□ -0.97
PDZRN3-212ENST00000498048 PLA2G4BP0C869 781 aa9.01□□□□□ -0.97
PDZRN3-212ENST00000498048 BCRP11274 1271 aa9.01□□□□□ -0.97
PDZRN3-212ENST00000498048 IDEP14735 1019 aa9.01□□□□□ -0.97
PDZRN3-212ENST00000498048 ZNF18P17022 549 aa9.01□□□□□ -0.97
PDZRN3-212ENST00000498048 RPA1P27694 616 aa9.01□□□□□ -0.97
PDZRN3-212ENST00000498048 HOXA7P31268 230 aaPredicted RBP9.01□□□□□ -0.97
PDZRN3-212ENST00000498048 CYP4A11Q02928 519 aa9.01□□□□□ -0.97
PDZRN3-212ENST00000498048 COASYQ13057 564 aa9.01□□□□□ -0.97
PDZRN3-212ENST00000498048 MTMR1Q13613 665 aa9.01□□□□□ -0.97
PDZRN3-212ENST00000498048 ECM1Q16610 540 aa9.01□□□□□ -0.97
PDZRN3-212ENST00000498048 ARHGEF16Q5VV41 709 aa9.01□□□□□ -0.97
PDZRN3-212ENST00000498048 SPATA1Q5VX52 437 aa9.01□□□□□ -0.97
PDZRN3-212ENST00000498048 DYMQ7RTS9 669 aa9.01□□□□□ -0.97
PDZRN3-212ENST00000498048 TMC6Q7Z403 805 aa9.01□□□□□ -0.97
PDZRN3-212ENST00000498048 MB21D1Q8N884 522 aa9.01□□□□□ -0.97
PDZRN3-212ENST00000498048 GIMAP8Q8ND71 665 aaPredicted RBP9.01□□□□□ -0.97
PDZRN3-212ENST00000498048 NEK9Q8TD19 979 aa9.01□□□□□ -0.97
PDZRN3-212ENST00000498048 RMDN3Q96TC7 470 aa9.01□□□□□ -0.97
PDZRN3-212ENST00000498048 EIF2AK1Q9BQI3 630 aaKnown RBP9.01□□□□□ -0.97
PDZRN3-212ENST00000498048 PDCD2LQ9BRP1 358 aa9.01□□□□□ -0.97
PDZRN3-212ENST00000498048 TUFT1Q9NNX1 390 aa9.01□□□□□ -0.97
PDZRN3-212ENST00000498048 ADAMTS5Q9UNA0 930 aa9.01□□□□□ -0.97
PDZRN3-212ENST00000498048 AGTPBP1Q9UPW5 1226 aa9.01□□□□□ -0.97
PDZRN3-212ENST00000498048 KCNH4Q9UQ05 1017 aa9.01□□□□□ -0.97
PDZRN3-212ENST00000498048 RIPK3Q9Y572 518 aa9.01□□□□□ -0.97
PDZRN3-212ENST00000498048 PFASO15067 1338 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms