RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 PPP1R3GB7ZBB8 358 aa8.83□□□□□ -1
HLA-DMB-262ENST00000498020 TUBBP07437 444 aa8.83□□□□□ -1
HLA-DMB-262ENST00000498020 ZNF18P17022 549 aa8.83□□□□□ -1
HLA-DMB-262ENST00000498020 CCDC122Q5T0U0 273 aa8.83□□□□□ -1
HLA-DMB-262ENST00000498020 DYDC1Q8WWB3 177 aa8.83□□□□□ -1
HLA-DMB-262ENST00000498020 CNOT6LQ96LI5 555 aaKnown RBP8.83□□□□□ -1
HLA-DMB-262ENST00000498020 ARFGAP3Q9NP61 516 aa8.83□□□□□ -1
HLA-DMB-262ENST00000498020 ZBTB22O15209 634 aa8.83□□□□□ -1
HLA-DMB-262ENST00000498020 TACC1O75410 805 aa8.83□□□□□ -1
HLA-DMB-262ENST00000498020 RHBDL3P58872 404 aa8.83□□□□□ -1
HLA-DMB-262ENST00000498020 HDLBPQ00341 1268 aaKnown RBP8.83□□□□□ -1
HLA-DMB-262ENST00000498020 CKAP4Q07065 602 aaKnown RBP8.83□□□□□ -1
HLA-DMB-262ENST00000498020 PSMD2Q13200 908 aa8.83□□□□□ -1
HLA-DMB-262ENST00000498020 UBE2SQ16763 222 aa8.83□□□□□ -1
HLA-DMB-262ENST00000498020 FAM26FQ5R3K3 315 aa8.83□□□□□ -1
HLA-DMB-262ENST00000498020 KIAA1841Q6NSI8 718 aa8.83□□□□□ -1
HLA-DMB-262ENST00000498020 ADGRF4Q8IZF3 695 aa8.83□□□□□ -1
HLA-DMB-262ENST00000498020 TNFRSF25Q93038 417 aa8.83□□□□□ -1
HLA-DMB-262ENST00000498020 RIC8AQ9NPQ8 531 aa8.83□□□□□ -1
HLA-DMB-262ENST00000498020 EPN1Q9Y6I3 576 aaPredicted RBP8.83□□□□□ -1
HLA-DMB-262ENST00000498020 ABCA3Q99758 1704 aa8.82□□□□□ -1
HLA-DMB-262ENST00000498020 CETN3O15182 167 aa8.82□□□□□ -1
HLA-DMB-262ENST00000498020 RHOBTB3O94955 611 aa8.82□□□□□ -1
HLA-DMB-262ENST00000498020 ALDH1A1P00352 501 aa8.82□□□□□ -1
HLA-DMB-262ENST00000498020 BMP3P12645 472 aa8.82□□□□□ -1
HLA-DMB-262ENST00000498020 RPS12P25398 132 aaKnown RBP8.82□□□□□ -1
HLA-DMB-262ENST00000498020 APLP1P51693 650 aa8.82□□□□□ -1
HLA-DMB-262ENST00000498020 EVX2Q03828 476 aa8.82□□□□□ -1
HLA-DMB-262ENST00000498020 AP3B2Q13367 1082 aa8.82□□□□□ -1
HLA-DMB-262ENST00000498020 MCM6Q14566 821 aa8.82□□□□□ -1
HLA-DMB-262ENST00000498020 UNC13DQ70J99 1090 aa8.82□□□□□ -1
HLA-DMB-262ENST00000498020 ADSSL1Q8N142 457 aa8.82□□□□□ -1
HLA-DMB-262ENST00000498020 ZNF784Q8NCA9 323 aaPredicted RBP8.82□□□□□ -1
HLA-DMB-262ENST00000498020 TMEM260Q9NX78 707 aa8.82□□□□□ -1
HLA-DMB-262ENST00000498020 POLIQ9UNA4 740 aa8.82□□□□□ -1
HLA-DMB-262ENST00000498020 FZD1Q9UP38 647 aa8.82□□□□□ -1
HLA-DMB-262ENST00000498020 ATP11BQ9Y2G3 1177 aa8.82□□□□□ -1
HLA-DMB-262ENST00000498020 COL1A1P02452 1464 aaPredicted RBP8.82□□□□□ -1
HLA-DMB-262ENST00000498020 EFCAB8A8MWE9 144 aa8.82□□□□□ -1
HLA-DMB-262ENST00000498020 TBC1D8O95759 1140 aa8.82□□□□□ -1
HLA-DMB-262ENST00000498020 GNA14O95837 355 aa8.82□□□□□ -1
HLA-DMB-262ENST00000498020 FCGRTP55899 365 aa8.82□□□□□ -1
HLA-DMB-262ENST00000498020 PDIA5Q14554 519 aa8.82□□□□□ -1
HLA-DMB-262ENST00000498020 CDC37Q16543 378 aaPredicted RBP8.82□□□□□ -1
HLA-DMB-262ENST00000498020 ERCC6LQ2NKX8 1250 aa8.82□□□□□ -1
HLA-DMB-262ENST00000498020 NCAPH2Q6IBW4 605 aa8.82□□□□□ -1
HLA-DMB-262ENST00000498020 PDXDC2PQ6P474 469 aa8.82□□□□□ -1
HLA-DMB-262ENST00000498020 POTEDQ86YR6 584 aa8.82□□□□□ -1
HLA-DMB-262ENST00000498020 CCDC97Q96F63 343 aaPredicted RBP8.82□□□□□ -1
HLA-DMB-262ENST00000498020 TSGA10Q9BZW7 698 aa8.82□□□□□ -1
HLA-DMB-262ENST00000498020 TRIM9Q9C026 710 aa8.82□□□□□ -1
HLA-DMB-262ENST00000498020 HAUS4Q9H6D7 363 aa8.82□□□□□ -1
HLA-DMB-262ENST00000498020 RIOX1Q9H6W3 641 aa8.82□□□□□ -1
HLA-DMB-262ENST00000498020 ROBO3Q96MS0 1386 aa8.82□□□□□ -1
HLA-DMB-262ENST00000498020 LGALS16A8MUM7 142 aa8.82□□□□□ -1
HLA-DMB-262ENST00000498020 EEF2P13639 858 aaKnown RBP8.82□□□□□ -1
HLA-DMB-262ENST00000498020 CTNNA2P26232 953 aa8.82□□□□□ -1
HLA-DMB-262ENST00000498020 RPL13P26373 211 aaKnown RBP8.82□□□□□ -1
HLA-DMB-262ENST00000498020 MB21D1Q8N884 522 aa8.82□□□□□ -1
HLA-DMB-262ENST00000498020 AKT1S1Q96B36 256 aa8.82□□□□□ -1
HLA-DMB-262ENST00000498020 ANO3Q9BYT9 981 aa8.82□□□□□ -1
HLA-DMB-262ENST00000498020 NYAP2Q9P242 653 aa8.82□□□□□ -1
HLA-DMB-262ENST00000498020 URB1O60287 2271 aaKnown RBP8.82□□□□□ -1
HLA-DMB-262ENST00000498020 SOWAHDA6NJG2 315 aa8.81□□□□□ -1
HLA-DMB-262ENST00000498020 CYTH3O43739 400 aa8.81□□□□□ -1
HLA-DMB-262ENST00000498020 UPP2O95045 317 aa8.81□□□□□ -1
HLA-DMB-262ENST00000498020 RNASELQ05823 741 aaKnown RBP8.81□□□□□ -1
HLA-DMB-262ENST00000498020 PRR16Q569H4 304 aa8.81□□□□□ -1
HLA-DMB-262ENST00000498020 RGMBQ6NW40 437 aa8.81□□□□□ -1
HLA-DMB-262ENST00000498020 GPBP1Q86WP2 473 aa8.81□□□□□ -1
HLA-DMB-262ENST00000498020 TC2NQ8N9U0 490 aa8.81□□□□□ -1
HLA-DMB-262ENST00000498020 PANK4Q9NVE7 773 aa8.81□□□□□ -1
HLA-DMB-262ENST00000498020 MYO1AQ9UBC5 1043 aa8.81□□□□□ -1
HLA-DMB-262ENST00000498020 ITIH6Q6UXX5 1313 aa8.81□□□□□ -1
HLA-DMB-262ENST00000498020 A0A087X0B3 334 aa8.81□□□□□ -1
HLA-DMB-262ENST00000498020 CTIFO43310 598 aaKnown RBP8.81□□□□□ -1
HLA-DMB-262ENST00000498020 FAM13AO94988 1023 aa8.81□□□□□ -1
HLA-DMB-262ENST00000498020 BMP6P22004 513 aa8.81□□□□□ -1
HLA-DMB-262ENST00000498020 SYDE2Q5VT97 1194 aa8.81□□□□□ -1
HLA-DMB-262ENST00000498020 SPATA20Q8TB22 786 aa8.81□□□□□ -1
HLA-DMB-262ENST00000498020 CTNNBL1Q8WYA6 563 aaPredicted RBP8.81□□□□□ -1
HLA-DMB-262ENST00000498020 SPAG5Q96R06 1193 aa8.81□□□□□ -1
HLA-DMB-262ENST00000498020 PPP1R16BQ96T49 567 aa8.81□□□□□ -1
HLA-DMB-262ENST00000498020 C7orf25Q9BPX7 421 aa8.81□□□□□ -1
HLA-DMB-262ENST00000498020 PLCD4Q9BRC7 762 aa8.81□□□□□ -1
HLA-DMB-262ENST00000498020 KCND1Q9NSA2 647 aa8.81□□□□□ -1
HLA-DMB-262ENST00000498020 HOXC10Q9NYD6 342 aa8.81□□□□□ -1
HLA-DMB-262ENST00000498020 PUF60Q9UHX1 559 aaKnown RBP8.81□□□□□ -1
HLA-DMB-262ENST00000498020 CD44P16070 742 aaKnown RBP8.81□□□□□ -1
HLA-DMB-262ENST00000498020 IFFO1Q0D2I5 559 aa8.81□□□□□ -1
HLA-DMB-262ENST00000498020 MOB2Q70IA6 237 aa8.81□□□□□ -1
HLA-DMB-262ENST00000498020 CCDC113Q9H0I3 377 aa8.81□□□□□ -1
HLA-DMB-262ENST00000498020 FAM49AQ9H0Q0 323 aaPredicted RBP8.81□□□□□ -1
HLA-DMB-262ENST00000498020 A0A1W2PQC6 194 aa8.81□□□□□ -1
HLA-DMB-262ENST00000498020 TRIM49BA6NDI0 452 aa8.81□□□□□ -1
HLA-DMB-262ENST00000498020 TDP2O95551 362 aa8.81□□□□□ -1
HLA-DMB-262ENST00000498020 LRRC63Q05C16 580 aa8.81□□□□□ -1
HLA-DMB-262ENST00000498020 QRICH1Q2TAL8 776 aa8.81□□□□□ -1
HLA-DMB-262ENST00000498020 RSPH3Q86UC2 560 aa8.81□□□□□ -1
HLA-DMB-262ENST00000498020 JAKMIP2Q96AA8 810 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms