RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 TLL1O43897 1013 aa13.54□□□□□ -0.24
NUDCD3-211ENST00000497978 EFCAB14O75071 495 aa13.54□□□□□ -0.24
NUDCD3-211ENST00000497978 CXCL10P02778 98 aa13.54□□□□□ -0.24
NUDCD3-211ENST00000497978 MRPS9P82933 396 aaKnown RBP13.54□□□□□ -0.24
NUDCD3-211ENST00000497978 NECTIN1Q15223 517 aa13.54□□□□□ -0.24
NUDCD3-211ENST00000497978 PCNX4Q63HM2 1172 aa13.54□□□□□ -0.24
NUDCD3-211ENST00000497978 USP17L6PQ6QN14 398 aa13.54□□□□□ -0.24
NUDCD3-211ENST00000497978 METTL7BQ6UX53 244 aa13.54□□□□□ -0.24
NUDCD3-211ENST00000497978 SYNE3Q6ZMZ3 975 aa13.54□□□□□ -0.24
NUDCD3-211ENST00000497978 NLRX1Q86UT6 975 aa13.54□□□□□ -0.24
NUDCD3-211ENST00000497978 ATXN2LQ8WWM7 1075 aaKnown RBP13.54□□□□□ -0.24
NUDCD3-211ENST00000497978 C16orf70Q9BSU1 422 aa13.54□□□□□ -0.24
NUDCD3-211ENST00000497978 ZBED2Q9BTP6 218 aa13.54□□□□□ -0.24
NUDCD3-211ENST00000497978 TUT1Q9H6E5 874 aaKnown RBP13.54□□□□□ -0.24
NUDCD3-211ENST00000497978 RTEL1Q9NZ71 1219 aa13.54□□□□□ -0.24
NUDCD3-211ENST00000497978 THEGQ9P2T0 379 aa13.54□□□□□ -0.24
NUDCD3-211ENST00000497978 EMSYQ7Z589 1322 aa13.54□□□□□ -0.24
NUDCD3-211ENST00000497978 TET1Q8NFU7 2136 aa13.54□□□□□ -0.24
NUDCD3-211ENST00000497978 NBNO60934 754 aa13.53□□□□□ -0.24
NUDCD3-211ENST00000497978 PLEKHA8P1O95397 391 aa13.53□□□□□ -0.24
NUDCD3-211ENST00000497978 LGALS2P05162 132 aa13.53□□□□□ -0.24
NUDCD3-211ENST00000497978 GNAT1P11488 350 aa13.53□□□□□ -0.24
NUDCD3-211ENST00000497978 THPOP40225 353 aa13.53□□□□□ -0.24
NUDCD3-211ENST00000497978 WDR5P61964 334 aaKnown RBP13.53□□□□□ -0.24
NUDCD3-211ENST00000497978 ZNF200P98182 395 aaPredicted RBP13.53□□□□□ -0.24
NUDCD3-211ENST00000497978 IKBKEQ14164 716 aa13.53□□□□□ -0.24
NUDCD3-211ENST00000497978 ZNF618Q5T7W0 954 aa13.53□□□□□ -0.24
NUDCD3-211ENST00000497978 CYFIP1Q7L576 1253 aa13.53□□□□□ -0.24
NUDCD3-211ENST00000497978 MICALL1Q8N3F8 863 aa13.53□□□□□ -0.24
NUDCD3-211ENST00000497978 SRBD1Q8N5C6 995 aaKnown RBP13.53□□□□□ -0.24
NUDCD3-211ENST00000497978 GIMAP8Q8ND71 665 aaPredicted RBP13.53□□□□□ -0.24
NUDCD3-211ENST00000497978 IL27Q8NEV9 243 aa13.53□□□□□ -0.24
NUDCD3-211ENST00000497978 ATP6V0A1Q93050 837 aa13.53□□□□□ -0.24
NUDCD3-211ENST00000497978 PSTPIP2Q9H939 334 aa13.53□□□□□ -0.24
NUDCD3-211ENST00000497978 PRDM6Q9NQX0 595 aa13.53□□□□□ -0.24
NUDCD3-211ENST00000497978 ZNF215Q9UL58 517 aaPredicted RBP13.53□□□□□ -0.24
NUDCD3-211ENST00000497978 CDH23Q9H251 3354 aa13.52□□□□□ -0.24
NUDCD3-211ENST00000497978 RSPH10B2B2RC85 870 aa13.52□□□□□ -0.25
NUDCD3-211ENST00000497978 MEIS2O14770 477 aa13.52□□□□□ -0.25
NUDCD3-211ENST00000497978 RSPH10BP0C881 870 aa13.52□□□□□ -0.25
NUDCD3-211ENST00000497978 SMIM10L2AP0DMW4 78 aa13.52□□□□□ -0.25
NUDCD3-211ENST00000497978 SMIM10L2BP0DMW5 78 aa13.52□□□□□ -0.25
NUDCD3-211ENST00000497978 RXRAP19793 462 aa13.52□□□□□ -0.25
NUDCD3-211ENST00000497978 MRPS5P82675 430 aaKnown RBP13.52□□□□□ -0.25
NUDCD3-211ENST00000497978 GPNMBQ14956 572 aa13.52□□□□□ -0.25
NUDCD3-211ENST00000497978 TRIM71Q2Q1W2 868 aaKnown RBP13.52□□□□□ -0.25
NUDCD3-211ENST00000497978 BMP2KLQ5H9B9 411 aa13.52□□□□□ -0.25
NUDCD3-211ENST00000497978 CENPQQ7L2Z9 268 aaPredicted RBP13.52□□□□□ -0.25
NUDCD3-211ENST00000497978 SERINC5Q86VE9 423 aa13.52□□□□□ -0.25
NUDCD3-211ENST00000497978 CMTR1Q8N1G2 835 aaKnown RBP13.52□□□□□ -0.25
NUDCD3-211ENST00000497978 FANCBQ8NB91 859 aa13.52□□□□□ -0.25
NUDCD3-211ENST00000497978 CDHR1Q96JP9 859 aa13.52□□□□□ -0.25
NUDCD3-211ENST00000497978 GPR20Q99678 358 aa13.52□□□□□ -0.25
NUDCD3-211ENST00000497978 SENP7Q9BQF6 1050 aa13.52□□□□□ -0.25
NUDCD3-211ENST00000497978 CERS4Q9HA82 394 aa13.52□□□□□ -0.25
NUDCD3-211ENST00000497978 SPDYE3A6NKU9 549 aa13.51□□□□□ -0.25
NUDCD3-211ENST00000497978 LGR5O75473 907 aa13.51□□□□□ -0.25
NUDCD3-211ENST00000497978 TAP1Q03518 808 aa13.51□□□□□ -0.25
NUDCD3-211ENST00000497978 SEMA3FQ13275 785 aa13.51□□□□□ -0.25
NUDCD3-211ENST00000497978 SKIV2LQ15477 1246 aaKnown RBP13.51□□□□□ -0.25
NUDCD3-211ENST00000497978 TMTC3Q6ZXV5 915 aa13.51□□□□□ -0.25
NUDCD3-211ENST00000497978 SGMS1Q86VZ5 419 aa13.51□□□□□ -0.25
NUDCD3-211ENST00000497978 MICU3Q86XE3 530 aa13.51□□□□□ -0.25
NUDCD3-211ENST00000497978 CCDC82Q8N4S0 544 aa13.51□□□□□ -0.25
NUDCD3-211ENST00000497978 BBXQ8WY36 941 aaPredicted RBP13.51□□□□□ -0.25
NUDCD3-211ENST00000497978 ARNTL2Q8WYA1 636 aa13.51□□□□□ -0.25
NUDCD3-211ENST00000497978 WNT8BQ93098 351 aa13.51□□□□□ -0.25
NUDCD3-211ENST00000497978 GPRASP2Q96D09 838 aa13.51□□□□□ -0.25
NUDCD3-211ENST00000497978 ASB2Q96Q27 587 aa13.51□□□□□ -0.25
NUDCD3-211ENST00000497978 LRRC2Q9BYS8 371 aa13.51□□□□□ -0.25
NUDCD3-211ENST00000497978 BCAS3Q9H6U6 928 aa13.51□□□□□ -0.25
NUDCD3-211ENST00000497978 EHMT1Q9H9B1 1298 aa13.51□□□□□ -0.25
NUDCD3-211ENST00000497978 UNC80Q8N2C7 3258 aa13.51□□□□□ -0.25
NUDCD3-211ENST00000497978 RFXAPO00287 272 aa13.5□□□□□ -0.25
NUDCD3-211ENST00000497978 CAND2O75155 1236 aa13.5□□□□□ -0.25
NUDCD3-211ENST00000497978 POU3F3P20264 500 aaPredicted RBP13.5□□□□□ -0.25
NUDCD3-211ENST00000497978 HOXC8P31273 242 aa13.5□□□□□ -0.25
NUDCD3-211ENST00000497978 DEFB103AP81534 67 aa13.5□□□□□ -0.25
NUDCD3-211ENST00000497978 PLCB2Q00722 1185 aa13.5□□□□□ -0.25
NUDCD3-211ENST00000497978 SP4Q02446 784 aa13.5□□□□□ -0.25
NUDCD3-211ENST00000497978 HIC1Q14526 733 aa13.5□□□□□ -0.25
NUDCD3-211ENST00000497978 UTP14CQ5TAP6 766 aaKnown RBP13.5□□□□□ -0.25
NUDCD3-211ENST00000497978 TRAF7Q6Q0C0 670 aa13.5□□□□□ -0.25
NUDCD3-211ENST00000497978 HEATR3Q7Z4Q2 680 aa13.5□□□□□ -0.25
NUDCD3-211ENST00000497978 RAB11FIP4Q86YS3 637 aa13.5□□□□□ -0.25
NUDCD3-211ENST00000497978 NEK1Q96PY6 1258 aa13.5□□□□□ -0.25
NUDCD3-211ENST00000497978 RAD9AQ99638 391 aa13.5□□□□□ -0.25
NUDCD3-211ENST00000497978 RNPEPQ9H4A4 650 aa13.5□□□□□ -0.25
NUDCD3-211ENST00000497978 RBM28Q9NW13 759 aaKnown RBP13.5□□□□□ -0.25
NUDCD3-211ENST00000497978 hCG_1642624A0A1W2PR95 340 aa13.49□□□□□ -0.25
NUDCD3-211ENST00000497978 TREHO43280 583 aa13.49□□□□□ -0.25
NUDCD3-211ENST00000497978 GJB5O95377 273 aa13.49□□□□□ -0.25
NUDCD3-211ENST00000497978 AMHP03971 560 aa13.49□□□□□ -0.25
NUDCD3-211ENST00000497978 MBTPS1Q14703 1052 aa13.49□□□□□ -0.25
NUDCD3-211ENST00000497978 AAK1Q2M2I8 961 aa13.49□□□□□ -0.25
NUDCD3-211ENST00000497978 TMCO2Q7Z6W1 182 aaPredicted RBP13.49□□□□□ -0.25
NUDCD3-211ENST00000497978 SEPT8Q92599 483 aa13.49□□□□□ -0.25
NUDCD3-211ENST00000497978 SETD4Q9NVD3 440 aa13.49□□□□□ -0.25
NUDCD3-211ENST00000497978 MTCH2Q9Y6C9 303 aa13.49□□□□□ -0.25
NUDCD3-211ENST00000497978 DOCK5Q9H7D0 1870 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms