RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 CYP2C18P33260 490 aa18.24■□□□□ 0.51
CTDSP1-214ENST00000497677 SSRP1Q08945 709 aaKnown RBP18.24■□□□□ 0.51
CTDSP1-214ENST00000497677 ANKRD1Q15327 319 aa18.24■□□□□ 0.51
CTDSP1-214ENST00000497677 C16orf59Q7L2K0 433 aa18.24■□□□□ 0.51
CTDSP1-214ENST00000497677 CCDC12Q8WUD4 166 aaPredicted RBP18.24■□□□□ 0.51
CTDSP1-214ENST00000497677 GPR20Q99678 358 aa18.24■□□□□ 0.51
CTDSP1-214ENST00000497677 PPP1R12CQ9BZL4 782 aa18.24■□□□□ 0.51
CTDSP1-214ENST00000497677 SLKQ9H2G2 1235 aaPredicted RBP18.24■□□□□ 0.51
CTDSP1-214ENST00000497677 HIPK3Q9H422 1215 aa18.24■□□□□ 0.51
CTDSP1-214ENST00000497677 EHMT1Q9H9B1 1298 aa18.24■□□□□ 0.51
CTDSP1-214ENST00000497677 C6orf50Q9HD87 102 aa18.24■□□□□ 0.51
CTDSP1-214ENST00000497677 SH3GLB2Q9NR46 395 aa18.24■□□□□ 0.51
CTDSP1-214ENST00000497677 SCN10AQ9Y5Y9 1956 aa18.24■□□□□ 0.51
CTDSP1-214ENST00000497677 KIAA1217Q5T5P2 1943 aa18.23■□□□□ 0.51
CTDSP1-214ENST00000497677 K7ELQ4 463 aaPredicted RBP18.23■□□□□ 0.51
CTDSP1-214ENST00000497677 MEIS1O00470 390 aa18.23■□□□□ 0.51
CTDSP1-214ENST00000497677 CPLX1O14810 134 aa18.23■□□□□ 0.51
CTDSP1-214ENST00000497677 EDIL3O43854 480 aa18.23■□□□□ 0.51
CTDSP1-214ENST00000497677 CTDNEP1O95476 244 aa18.23■□□□□ 0.51
CTDSP1-214ENST00000497677 SUPT20HL2P0C7V6 817 aa18.23■□□□□ 0.51
CTDSP1-214ENST00000497677 GNA11P29992 359 aa18.23■□□□□ 0.51
CTDSP1-214ENST00000497677 PSEN2P49810 448 aa18.23■□□□□ 0.51
CTDSP1-214ENST00000497677 NEK4P51957 841 aa18.23■□□□□ 0.51
CTDSP1-214ENST00000497677 FPGSQ05932 587 aa18.23■□□□□ 0.51
CTDSP1-214ENST00000497677 MTMR1Q13613 665 aa18.23■□□□□ 0.51
CTDSP1-214ENST00000497677 MFSD10Q14728 455 aa18.23■□□□□ 0.51
CTDSP1-214ENST00000497677 FAM47CQ5HY64 1035 aa18.23■□□□□ 0.51
CTDSP1-214ENST00000497677 TRIM22Q8IYM9 498 aa18.23■□□□□ 0.51
CTDSP1-214ENST00000497677 CDHR1Q96JP9 859 aa18.23■□□□□ 0.51
CTDSP1-214ENST00000497677 AIFM3Q96NN9 605 aa18.23■□□□□ 0.51
CTDSP1-214ENST00000497677 KCNH7Q9NS40 1196 aa18.23■□□□□ 0.51
CTDSP1-214ENST00000497677 DEXIO95424 95 aa18.22■□□□□ 0.51
CTDSP1-214ENST00000497677 SLC34A2O95436 690 aa18.22■□□□□ 0.51
CTDSP1-214ENST00000497677 CYP3A4P08684 503 aa18.22■□□□□ 0.51
CTDSP1-214ENST00000497677 CSF2RAP15509 400 aa18.22■□□□□ 0.51
CTDSP1-214ENST00000497677 ARHGAP4P98171 946 aa18.22■□□□□ 0.51
CTDSP1-214ENST00000497677 ME3Q16798 604 aa18.22■□□□□ 0.51
CTDSP1-214ENST00000497677 KIAA0753Q2KHM9 967 aa18.22■□□□□ 0.51
CTDSP1-214ENST00000497677 CEP55Q53EZ4 464 aa18.22■□□□□ 0.51
CTDSP1-214ENST00000497677 GDF6Q6KF10 455 aaPredicted RBP18.22■□□□□ 0.51
CTDSP1-214ENST00000497677 GIMAP8Q8ND71 665 aaPredicted RBP18.22■□□□□ 0.51
CTDSP1-214ENST00000497677 RASGRP4Q8TDF6 673 aa18.22■□□□□ 0.51
CTDSP1-214ENST00000497677 VWCEQ96DN2 955 aa18.22■□□□□ 0.51
CTDSP1-214ENST00000497677 LRCH3Q96II8 777 aa18.22■□□□□ 0.51
CTDSP1-214ENST00000497677 KATNAL1Q9BW62 490 aa18.22■□□□□ 0.51
CTDSP1-214ENST00000497677 WNT8AQ9H1J5 351 aa18.22■□□□□ 0.51
CTDSP1-214ENST00000497677 HDAC6Q9UBN7 1215 aa18.22■□□□□ 0.51
CTDSP1-214ENST00000497677 GTF2IRD1Q9UHL9 959 aa18.22■□□□□ 0.51
CTDSP1-214ENST00000497677 LTBP2Q14767 1821 aa18.21■□□□□ 0.51
CTDSP1-214ENST00000497677 DTNBO60941 627 aa18.21■□□□□ 0.51
CTDSP1-214ENST00000497677 LARGE1O95461 756 aa18.21■□□□□ 0.51
CTDSP1-214ENST00000497677 LGALS2P05162 132 aa18.21■□□□□ 0.51
CTDSP1-214ENST00000497677 ARP10275 920 aa18.21■□□□□ 0.51
CTDSP1-214ENST00000497677 CHMP4BP1P59074 171 aa18.21■□□□□ 0.51
CTDSP1-214ENST00000497677 HIC1Q14526 733 aa18.21■□□□□ 0.51
CTDSP1-214ENST00000497677 NPY5RQ15761 445 aa18.21■□□□□ 0.51
CTDSP1-214ENST00000497677 MCTP2Q6DN12 878 aa18.21■□□□□ 0.51
CTDSP1-214ENST00000497677 CPLX2Q6PUV4 134 aaKnown RBP18.21■□□□□ 0.51
CTDSP1-214ENST00000497677 REXO1Q8N1G1 1221 aaKnown RBP18.21■□□□□ 0.51
CTDSP1-214ENST00000497677 CCDC148Q8NFR7 591 aa18.21■□□□□ 0.51
CTDSP1-214ENST00000497677 ALG1Q9BT22 464 aa18.21■□□□□ 0.51
CTDSP1-214ENST00000497677 IGLV3-22A0A075B6J6 115 aa18.2■□□□□ 0.5
CTDSP1-214ENST00000497677 GSTTP1A0A1W2PQM5 241 aa18.2■□□□□ 0.5
CTDSP1-214ENST00000497677 FAM86B1E9PN63 330 aa18.2■□□□□ 0.5
CTDSP1-214ENST00000497677 H3BRB1 525 aa18.2■□□□□ 0.5
CTDSP1-214ENST00000497677 NOP56O00567 594 aaKnown RBP18.2■□□□□ 0.5
CTDSP1-214ENST00000497677 FAM86B2P0C5J1 330 aa18.2■□□□□ 0.5
CTDSP1-214ENST00000497677 PTGISQ16647 500 aa18.2■□□□□ 0.5
CTDSP1-214ENST00000497677 NIPA1Q7RTP0 329 aa18.2■□□□□ 0.5
CTDSP1-214ENST00000497677 TMEM199Q8N511 208 aa18.2■□□□□ 0.5
CTDSP1-214ENST00000497677 NECAB1Q8N987 351 aa18.2■□□□□ 0.5
CTDSP1-214ENST00000497677 TUT1Q9H6E5 874 aaKnown RBP18.2■□□□□ 0.5
CTDSP1-214ENST00000497677 PKD2L1Q9P0L9 805 aa18.2■□□□□ 0.5
CTDSP1-214ENST00000497677 M0R2N6 131 aa18.19■□□□□ 0.5
CTDSP1-214ENST00000497677 HOXC8P31273 242 aa18.19■□□□□ 0.5
CTDSP1-214ENST00000497677 CCL23P55773 120 aa18.19■□□□□ 0.5
CTDSP1-214ENST00000497677 NLRP5P59047 1200 aa18.19■□□□□ 0.5
CTDSP1-214ENST00000497677 SP4Q02446 784 aa18.19■□□□□ 0.5
CTDSP1-214ENST00000497677 ITGB3BPQ13352 177 aaPredicted RBP18.19■□□□□ 0.5
CTDSP1-214ENST00000497677 PPIGQ13427 754 aaKnown RBP eCLIP18.19■□□□□ 0.55e-8■■■□□ 15.9
CTDSP1-214ENST00000497677 TMEM240Q5SV17 173 aa18.19■□□□□ 0.5
CTDSP1-214ENST00000497677 TRIM50Q86XT4 487 aa18.19■□□□□ 0.5
CTDSP1-214ENST00000497677 FAM177A1Q8N128 213 aaPredicted RBP18.19■□□□□ 0.5
CTDSP1-214ENST00000497677 C7orf31Q8N865 590 aa18.19■□□□□ 0.5
CTDSP1-214ENST00000497677 BICD2Q8TD16 824 aa18.19■□□□□ 0.5
CTDSP1-214ENST00000497677 DHX38Q92620 1227 aaKnown RBP18.19■□□□□ 0.5
CTDSP1-214ENST00000497677 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.19■□□□□ 0.51e-10■■□□□ 14.2
CTDSP1-214ENST00000497677 AGO4Q9HCK5 861 aaKnown RBP18.19■□□□□ 0.5
CTDSP1-214ENST00000497677 PCDHA4Q9UN74 947 aa18.19■□□□□ 0.5
CTDSP1-214ENST00000497677 SZT2Q5T011 3432 aa18.19■□□□□ 0.5
CTDSP1-214ENST00000497677 CDKL5O76039 1030 aa18.18■□□□□ 0.5
CTDSP1-214ENST00000497677 ACRP10323 421 aa18.18■□□□□ 0.5
CTDSP1-214ENST00000497677 FDPSP14324 419 aaKnown RBP18.18■□□□□ 0.5
CTDSP1-214ENST00000497677 CIITAP33076 1130 aa18.18■□□□□ 0.5
CTDSP1-214ENST00000497677 ZNF200P98182 395 aaPredicted RBP18.18■□□□□ 0.5
CTDSP1-214ENST00000497677 ST3GAL1Q11201 340 aa18.18■□□□□ 0.5
CTDSP1-214ENST00000497677 DAGLBQ8NCG7 672 aa18.18■□□□□ 0.5
CTDSP1-214ENST00000497677 SEPT1Q8WYJ6 367 aa18.18■□□□□ 0.5
CTDSP1-214ENST00000497677 GTF3C6Q969F1 213 aa18.18■□□□□ 0.5
CTDSP1-214ENST00000497677 IL23AQ9NPF7 189 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms