RNA–Protein interactions for RNA: ENST00000497506.5

FAM3A-220, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-220ENST00000497506 HOXD8P13378 290 aaPredicted RBP18.42■□□□□ 0.54
FAM3A-220ENST00000497506 PURAQ00577 322 aaKnown RBP18.42■□□□□ 0.54
FAM3A-220ENST00000497506 ITGB3BPQ13352 177 aaPredicted RBP18.42■□□□□ 0.54
FAM3A-220ENST00000497506 BRDTQ58F21 947 aaPredicted RBP18.42■□□□□ 0.54
FAM3A-220ENST00000497506 NEK8Q86SG6 692 aa18.42■□□□□ 0.54
FAM3A-220ENST00000497506 SPATA33Q96N06 139 aa18.42■□□□□ 0.54
FAM3A-220ENST00000497506 POLR3EQ9NVU0 708 aa18.42■□□□□ 0.54
FAM3A-220ENST00000497506 NFASCO94856 1347 aa18.42■□□□□ 0.54
FAM3A-220ENST00000497506 KIF28PB7ZC32 967 aa18.41■□□□□ 0.54
FAM3A-220ENST00000497506 MYL3P08590 195 aa18.41■□□□□ 0.54
FAM3A-220ENST00000497506 SETQ01105 290 aaPredicted RBP18.41■□□□□ 0.54
FAM3A-220ENST00000497506 LETM2Q2VYF4 491 aa18.41■□□□□ 0.54
FAM3A-220ENST00000497506 Q4G0T1 1027 aa18.41■□□□□ 0.54
FAM3A-220ENST00000497506 SLC39A5Q6ZMH5 540 aa18.41■□□□□ 0.54
FAM3A-220ENST00000497506 FOXD4L1Q9NU39 408 aa18.41■□□□□ 0.54
FAM3A-220ENST00000497506 TNRC18O15417 2968 aaPredicted RBP18.4■□□□□ 0.54
FAM3A-220ENST00000497506 IPO5O00410 1097 aaKnown RBP18.4■□□□□ 0.54
FAM3A-220ENST00000497506 DHX15O43143 795 aaKnown RBP18.4■□□□□ 0.54
FAM3A-220ENST00000497506 KPNA6O60684 536 aa18.4■□□□□ 0.54
FAM3A-220ENST00000497506 PPFIA4O75335 1185 aa18.4■□□□□ 0.54
FAM3A-220ENST00000497506 CABYRO75952 493 aa18.4■□□□□ 0.54
FAM3A-220ENST00000497506 U2AF2P26368 475 aaKnown RBP eCLIP18.4■□□□□ 0.54
FAM3A-220ENST00000497506 ATN1P54259 1190 aaPredicted RBP18.4■□□□□ 0.54
FAM3A-220ENST00000497506 SNX17Q15036 470 aa18.4■□□□□ 0.54
FAM3A-220ENST00000497506 DGKDQ16760 1214 aa18.4■□□□□ 0.54
FAM3A-220ENST00000497506 LRRC26Q2I0M4 334 aa18.4■□□□□ 0.54
FAM3A-220ENST00000497506 LARP1BQ659C4 914 aaKnown RBP18.4■□□□□ 0.54
FAM3A-220ENST00000497506 PPP4R3AQ6IN85 833 aa18.4■□□□□ 0.54
FAM3A-220ENST00000497506 GLT1D1Q96MS3 346 aa18.4■□□□□ 0.54
FAM3A-220ENST00000497506 UIMC1Q96RL1 719 aa18.4■□□□□ 0.54
FAM3A-220ENST00000497506 GPR20Q99678 358 aa18.4■□□□□ 0.54
FAM3A-220ENST00000497506 STARD7Q9NQZ5 370 aa18.4■□□□□ 0.54
FAM3A-220ENST00000497506 MKI67P46013 3256 aaKnown RBP18.4■□□□□ 0.54
FAM3A-220ENST00000497506 SCN10AQ9Y5Y9 1956 aa18.4■□□□□ 0.54
FAM3A-220ENST00000497506 ELP1O95163 1332 aa18.4■□□□□ 0.54
FAM3A-220ENST00000497506 WNT7AO00755 349 aa18.39■□□□□ 0.53
FAM3A-220ENST00000497506 MSH4O15457 936 aa18.39■□□□□ 0.53
FAM3A-220ENST00000497506 MLLT1Q03111 559 aaPredicted RBP18.39■□□□□ 0.53
FAM3A-220ENST00000497506 NOSTRINQ8IVI9 506 aa18.39■□□□□ 0.53
FAM3A-220ENST00000497506 KAT2BQ92831 832 aa18.39■□□□□ 0.53
FAM3A-220ENST00000497506 SDF4Q9BRK5 362 aa18.39■□□□□ 0.53
FAM3A-220ENST00000497506 ZNF577Q9BSK1 485 aa18.39■□□□□ 0.53
FAM3A-220ENST00000497506 MTG1Q9BT17 334 aaPredicted RBP18.39■□□□□ 0.53
FAM3A-220ENST00000497506 HTATIP2Q9BUP3 242 aa18.39■□□□□ 0.53
FAM3A-220ENST00000497506 SLC9A2Q9UBY0 812 aa18.39■□□□□ 0.53
FAM3A-220ENST00000497506 DDX25Q9UHL0 483 aaKnown RBP18.39■□□□□ 0.53
FAM3A-220ENST00000497506 GRIN2DO15399 1336 aa18.39■□□□□ 0.53
FAM3A-220ENST00000497506 GSTTP1A0A1W2PQM5 241 aa18.38■□□□□ 0.53
FAM3A-220ENST00000497506 H3BQV1 296 aa18.38■□□□□ 0.53
FAM3A-220ENST00000497506 NOP56O00567 594 aaKnown RBP18.38■□□□□ 0.53
FAM3A-220ENST00000497506 SLC37A4O43826 429 aa18.38■□□□□ 0.53
FAM3A-220ENST00000497506 CCNT1O60563 726 aaKnown RBP18.38■□□□□ 0.53
FAM3A-220ENST00000497506 GCFC2P16383 781 aaKnown RBP18.38■□□□□ 0.53
FAM3A-220ENST00000497506 PSMC6P62333 389 aa18.38■□□□□ 0.53
FAM3A-220ENST00000497506 SP4Q02446 784 aa18.38■□□□□ 0.53
FAM3A-220ENST00000497506 C1orf53Q5VUE5 145 aa18.38■□□□□ 0.53
FAM3A-220ENST00000497506 SLC5A5Q92911 643 aa18.38■□□□□ 0.53
FAM3A-220ENST00000497506 VTI1AQ96AJ9 217 aa18.38■□□□□ 0.53
FAM3A-220ENST00000497506 NAP1L4Q99733 375 aaKnown RBP18.38■□□□□ 0.53
FAM3A-220ENST00000497506 JPH1Q9HDC5 661 aaPredicted RBP18.38■□□□□ 0.53
FAM3A-220ENST00000497506 CCNE2O96020 404 aa18.37■□□□□ 0.53
FAM3A-220ENST00000497506 CDK7P50613 346 aa18.37■□□□□ 0.53
FAM3A-220ENST00000497506 GNL2Q13823 731 aaKnown RBP18.37■□□□□ 0.53
FAM3A-220ENST00000497506 SLC43A3Q8NBI5 491 aa18.37■□□□□ 0.53
FAM3A-220ENST00000497506 ETNPPLQ8TBG4 499 aa18.37■□□□□ 0.53
FAM3A-220ENST00000497506 C16orf70Q9BSU1 422 aa18.37■□□□□ 0.53
FAM3A-220ENST00000497506 TBC1D22BQ9NU19 505 aa18.37■□□□□ 0.53
FAM3A-220ENST00000497506 DNAH12Q6ZR08 3092 aa18.37■□□□□ 0.53
FAM3A-220ENST00000497506 PDE4DIPQ5VU43 2346 aa18.37■□□□□ 0.53
FAM3A-220ENST00000497506 A0A0U1RQG5 324 aaPredicted RBP18.36■□□□□ 0.53
FAM3A-220ENST00000497506 DDX39AO00148 427 aaKnown RBP18.36■□□□□ 0.53
FAM3A-220ENST00000497506 LGALS2P05162 132 aa18.36■□□□□ 0.53
FAM3A-220ENST00000497506 ZNF286BP0CG31 522 aa18.36■□□□□ 0.53
FAM3A-220ENST00000497506 PDCP20941 246 aa18.36■□□□□ 0.53
FAM3A-220ENST00000497506 SYT1P21579 422 aa18.36■□□□□ 0.53
FAM3A-220ENST00000497506 TCF7P36402 384 aaPredicted RBP18.36■□□□□ 0.53
FAM3A-220ENST00000497506 RTP1P59025 263 aa18.36■□□□□ 0.53
FAM3A-220ENST00000497506 ACTR2P61160 394 aa18.36■□□□□ 0.53
FAM3A-220ENST00000497506 ITGA7Q13683 1181 aa18.36■□□□□ 0.53
FAM3A-220ENST00000497506 MCTP1Q6DN14 999 aa18.36■□□□□ 0.53
FAM3A-220ENST00000497506 SEPT1Q8WYJ6 367 aa18.36■□□□□ 0.53
FAM3A-220ENST00000497506 GJA10Q969M2 543 aa18.36■□□□□ 0.53
FAM3A-220ENST00000497506 RIT2Q99578 217 aa18.36■□□□□ 0.53
FAM3A-220ENST00000497506 KCNMB3Q9NPA1 279 aa18.36■□□□□ 0.53
FAM3A-220ENST00000497506 ARVCFO00192 962 aa18.35■□□□□ 0.53
FAM3A-220ENST00000497506 HAS3O00219 553 aa18.35■□□□□ 0.53
FAM3A-220ENST00000497506 PSMD10O75832 226 aa18.35■□□□□ 0.53
FAM3A-220ENST00000497506 ATG7O95352 703 aa18.35■□□□□ 0.53
FAM3A-220ENST00000497506 F2P00734 622 aa18.35■□□□□ 0.53
FAM3A-220ENST00000497506 NBPF20Q3BBV1 942 aa18.35■□□□□ 0.53
FAM3A-220ENST00000497506 TRIM60Q495X7 471 aa18.35■□□□□ 0.53
FAM3A-220ENST00000497506 HAS1Q92839 578 aa18.35■□□□□ 0.53
FAM3A-220ENST00000497506 TBX3O15119 743 aa18.34■□□□□ 0.53
FAM3A-220ENST00000497506 ATP2B1P20020 1258 aa18.34■□□□□ 0.53
FAM3A-220ENST00000497506 PSEN2P49810 448 aa18.34■□□□□ 0.53
FAM3A-220ENST00000497506 TOB1P50616 345 aaPredicted RBP18.34■□□□□ 0.53
FAM3A-220ENST00000497506 TLE2Q04725 743 aa18.34■□□□□ 0.53
FAM3A-220ENST00000497506 UTP14CQ5TAP6 766 aaKnown RBP18.34■□□□□ 0.53
FAM3A-220ENST00000497506 LRCH2Q5VUJ6 765 aa18.34■□□□□ 0.53
FAM3A-220ENST00000497506 ABHD15Q6UXT9 468 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms