RNA–Protein interactions for RNA: ENST00000497415.1

RPN1-208, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 547 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-208ENST00000497415 C6orf50Q9HD87 102 aa21.37■■□□□ 1.01
RPN1-208ENST00000497415 IL23AQ9NPF7 189 aa21.37■■□□□ 1.01
RPN1-208ENST00000497415 HDAC6Q9UBN7 1215 aa21.37■■□□□ 1.01
RPN1-208ENST00000497415 NOP56O00567 594 aaKnown RBP21.36■■□□□ 1.01
RPN1-208ENST00000497415 PPFIA3O75145 1194 aa21.36■■□□□ 1.01
RPN1-208ENST00000497415 LGALS2P05162 132 aa21.36■■□□□ 1.01
RPN1-208ENST00000497415 GNA11P29992 359 aa21.36■■□□□ 1.01
RPN1-208ENST00000497415 CCL23P55773 120 aa21.36■■□□□ 1.01
RPN1-208ENST00000497415 CHMP4BP1P59074 171 aa21.36■■□□□ 1.01
RPN1-208ENST00000497415 MTMR1Q13613 665 aa21.36■■□□□ 1.01
RPN1-208ENST00000497415 PTGISQ16647 500 aa21.36■■□□□ 1.01
RPN1-208ENST00000497415 TMEM240Q5SV17 173 aa21.36■■□□□ 1.01
RPN1-208ENST00000497415 MCTP2Q6DN12 878 aa21.36■■□□□ 1.01
RPN1-208ENST00000497415 CRYGNQ8WXF5 182 aa21.36■■□□□ 1.01
RPN1-208ENST00000497415 SH3GLB2Q9NR46 395 aa21.36■■□□□ 1.01
RPN1-208ENST00000497415 SZT2Q5T011 3432 aa21.35■■□□□ 1.01
RPN1-208ENST00000497415 H3BRB1 525 aa21.35■■□□□ 1.01
RPN1-208ENST00000497415 PITPNM1O00562 1244 aa21.35■■□□□ 1.01
RPN1-208ENST00000497415 ADAMTS3O15072 1205 aa21.35■■□□□ 1.01
RPN1-208ENST00000497415 SSRP1Q08945 709 aaKnown RBP21.35■■□□□ 1.01
RPN1-208ENST00000497415 STK3Q13188 491 aa21.35■■□□□ 1.01
RPN1-208ENST00000497415 JAKMIP3Q5VZ66 844 aa21.35■■□□□ 1.01
RPN1-208ENST00000497415 TRIM22Q8IYM9 498 aa21.35■■□□□ 1.01
RPN1-208ENST00000497415 C7orf31Q8N865 590 aa21.35■■□□□ 1.01
RPN1-208ENST00000497415 CCDC148Q8NFR7 591 aa21.35■■□□□ 1.01
RPN1-208ENST00000497415 RNPC3Q96LT9 517 aaKnown RBP21.35■■□□□ 1.01
RPN1-208ENST00000497415 TUT1Q9H6E5 874 aaKnown RBP21.35■■□□□ 1.01
RPN1-208ENST00000497415 TELO2Q9Y4R8 837 aa21.35■■□□□ 1.01
RPN1-208ENST00000497415 TRIP12Q14669 1992 aaPredicted RBP21.35■■□□□ 1.01
RPN1-208ENST00000497415 CPLX1O14810 134 aa21.34■■□□□ 1.01
RPN1-208ENST00000497415 ARHGAP4P98171 946 aa21.34■■□□□ 1.01
RPN1-208ENST00000497415 ANKRD1Q15327 319 aa21.34■■□□□ 1.01
RPN1-208ENST00000497415 CEP55Q53EZ4 464 aa21.34■■□□□ 1.01
RPN1-208ENST00000497415 RASIP1Q5U651 963 aa21.34■■□□□ 1.01
RPN1-208ENST00000497415 PSRC1Q6PGN9 363 aaPredicted RBP21.34■■□□□ 1.01
RPN1-208ENST00000497415 CPLX2Q6PUV4 134 aaKnown RBP21.34■■□□□ 1.01
RPN1-208ENST00000497415 REXO1Q8N1G1 1221 aaKnown RBP21.34■■□□□ 1.01
RPN1-208ENST00000497415 CYP2W1Q8TAV3 490 aa21.34■■□□□ 1.01
RPN1-208ENST00000497415 VWCEQ96DN2 955 aa21.34■■□□□ 1.01
RPN1-208ENST00000497415 KCNH7Q9NS40 1196 aa21.34■■□□□ 1.01
RPN1-208ENST00000497415 TPCN1Q9ULQ1 816 aa21.34■■□□□ 1.01
RPN1-208ENST00000497415 NOD1Q9Y239 953 aa21.34■■□□□ 1.01
RPN1-208ENST00000497415 TANC1Q9C0D5 1861 aa21.33■■□□□ 1.01
RPN1-208ENST00000497415 MEIS1O00470 390 aa21.33■■□□□ 1.01
RPN1-208ENST00000497415 PFKFB2O60825 505 aa21.33■■□□□ 1.01
RPN1-208ENST00000497415 DEXIO95424 95 aa21.33■■□□□ 1.01
RPN1-208ENST00000497415 CYP3A4P08684 503 aa21.33■■□□□ 1.01
RPN1-208ENST00000497415 ACRP10323 421 aa21.33■■□□□ 1.01
RPN1-208ENST00000497415 AK2P54819 239 aa21.33■■□□□ 1.01
RPN1-208ENST00000497415 RBL2Q08999 1139 aa21.33■■□□□ 1.01
RPN1-208ENST00000497415 SCRN1Q12765 414 aa21.33■■□□□ 1.01
RPN1-208ENST00000497415 BFSP2Q13515 415 aa21.33■■□□□ 1.01
RPN1-208ENST00000497415 ZNF365Q70YC5 407 aa21.33■■□□□ 1.01
RPN1-208ENST00000497415 NIPA1Q7RTP0 329 aa21.33■■□□□ 1.01
RPN1-208ENST00000497415 BICD2Q8TD16 824 aa21.33■■□□□ 1.01
RPN1-208ENST00000497415 SCLYQ96I15 445 aa21.33■■□□□ 1.01
RPN1-208ENST00000497415 VPS54Q9P1Q0 977 aa21.33■■□□□ 1.01
RPN1-208ENST00000497415 SCN5AQ14524 2016 aa21.33■■□□□ 1
RPN1-208ENST00000497415 GSTTP1A0A1W2PQM5 241 aa21.32■■□□□ 1
RPN1-208ENST00000497415 HOXC8P31273 242 aa21.32■■□□□ 1
RPN1-208ENST00000497415 SMAD3P84022 425 aaKnown RBP21.32■■□□□ 1
RPN1-208ENST00000497415 C8orf34Q49A92 452 aa21.32■■□□□ 1
RPN1-208ENST00000497415 RPUSD2Q8IZ73 545 aaKnown RBP21.32■■□□□ 1
RPN1-208ENST00000497415 CAGE1Q8TC20 777 aa21.32■■□□□ 1
RPN1-208ENST00000497415 DHX38Q92620 1227 aaKnown RBP21.32■■□□□ 1
RPN1-208ENST00000497415 SLKQ9H2G2 1235 aaPredicted RBP21.32■■□□□ 1
RPN1-208ENST00000497415 NFASCO94856 1347 aa21.31■■□□□ 1
RPN1-208ENST00000497415 FGBP02675 491 aa21.31■■□□□ 1
RPN1-208ENST00000497415 IQCF3P0C7M6 154 aa21.31■■□□□ 1
RPN1-208ENST00000497415 ARP10275 920 aa21.31■■□□□ 1
RPN1-208ENST00000497415 HIC1Q14526 733 aa21.31■■□□□ 1
RPN1-208ENST00000497415 FAM177A1Q8N128 213 aaPredicted RBP21.31■■□□□ 1
RPN1-208ENST00000497415 CCDC155Q8N6L0 562 aa21.31■■□□□ 1
RPN1-208ENST00000497415 RETREG2Q8NC44 543 aa21.31■■□□□ 1
RPN1-208ENST00000497415 SEPT1Q8WYJ6 367 aa21.31■■□□□ 1
RPN1-208ENST00000497415 HERVK_113Q902F9 699 aa21.31■■□□□ 1
RPN1-208ENST00000497415 PKD2L1Q9P0L9 805 aa21.31■■□□□ 1
RPN1-208ENST00000497415 RFC2P35250 354 aa21.3■■□□□ 1
RPN1-208ENST00000497415 TCF7P36402 384 aaPredicted RBP21.3■■□□□ 1
RPN1-208ENST00000497415 ZNF200P98182 395 aaPredicted RBP21.3■■□□□ 1
RPN1-208ENST00000497415 SP4Q02446 784 aa21.3■■□□□ 1
RPN1-208ENST00000497415 PTK7Q13308 1070 aa21.3■■□□□ 1
RPN1-208ENST00000497415 UTP14CQ5TAP6 766 aaKnown RBP21.3■■□□□ 1
RPN1-208ENST00000497415 FAM109BQ6ICB4 259 aaPredicted RBP21.3■■□□□ 1
RPN1-208ENST00000497415 AFAP1L1Q8TED9 768 aa21.3■■□□□ 1
RPN1-208ENST00000497415 AGO4Q9HCK5 861 aaKnown RBP21.3■■□□□ 1
RPN1-208ENST00000497415 ZNF215Q9UL58 517 aaPredicted RBP21.3■■□□□ 1
RPN1-208ENST00000497415 IGLV3-22A0A075B6J6 115 aa21.29■■□□□ 1
RPN1-208ENST00000497415 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.29■■□□□ 1
RPN1-208ENST00000497415 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.29■■□□□ 1
RPN1-208ENST00000497415 FAM86B1E9PN63 330 aa21.29■■□□□ 1
RPN1-208ENST00000497415 CDKL5O76039 1030 aa21.29■■□□□ 1
RPN1-208ENST00000497415 PFKMP08237 780 aa21.29■■□□□ 1
RPN1-208ENST00000497415 FAM86B2P0C5J1 330 aa21.29■■□□□ 1
RPN1-208ENST00000497415 SMIM10L2AP0DMW4 78 aa21.29■■□□□ 1
RPN1-208ENST00000497415 SMIM10L2BP0DMW5 78 aa21.29■■□□□ 1
RPN1-208ENST00000497415 ZNF76P36508 570 aa21.29■■□□□ 1
RPN1-208ENST00000497415 NLRP5P59047 1200 aa21.29■■□□□ 1
RPN1-208ENST00000497415 TRIM71Q2Q1W2 868 aaKnown RBP21.29■■□□□ 1
RPN1-208ENST00000497415 TRIM50Q86XT4 487 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms