RNA–Protein interactions for RNA: ENST00000497380.1

USP13-205, Transcript of ubiquitin specific peptidase 13, humanhuman

TSL 3

Gene USP13, Length 509 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-205ENST00000497380 A0A1W2PQ27 194 aa11.8□□□□□ -0.52
USP13-205ENST00000497380 A0A1W2PQ64 194 aa11.8□□□□□ -0.52
USP13-205ENST00000497380 A0A1W2PQD8 194 aa11.8□□□□□ -0.52
USP13-205ENST00000497380 SLC26A4O43511 780 aa11.8□□□□□ -0.52
USP13-205ENST00000497380 PSMD10O75832 226 aa11.8□□□□□ -0.52
USP13-205ENST00000497380 SNAI1O95863 264 aaPredicted RBP11.8□□□□□ -0.52
USP13-205ENST00000497380 HMGCRP04035 888 aa11.8□□□□□ -0.52
USP13-205ENST00000497380 TXNP10599 105 aaKnown RBP11.8□□□□□ -0.52
USP13-205ENST00000497380 TECP42680 631 aa11.8□□□□□ -0.52
USP13-205ENST00000497380 UBE2HP62256 183 aa11.8□□□□□ -0.52
USP13-205ENST00000497380 KRT76Q01546 638 aa11.8□□□□□ -0.52
USP13-205ENST00000497380 CCL14Q16627 93 aa11.8□□□□□ -0.52
USP13-205ENST00000497380 OTOP1Q7RTM1 612 aa11.8□□□□□ -0.52
USP13-205ENST00000497380 FBXO16Q8IX29 292 aaPredicted RBP11.8□□□□□ -0.52
USP13-205ENST00000497380 KCTD17Q8N5Z5 321 aa11.8□□□□□ -0.52
USP13-205ENST00000497380 IGSF22Q8N9C0 903 aa11.8□□□□□ -0.52
USP13-205ENST00000497380 RDM1Q8NG50 284 aa11.8□□□□□ -0.52
USP13-205ENST00000497380 MLXIPQ9HAP2 919 aa11.8□□□□□ -0.52
USP13-205ENST00000497380 FAM13BQ9NYF5 915 aa11.8□□□□□ -0.52
USP13-205ENST00000497380 LRWD1Q9UFC0 647 aa11.8□□□□□ -0.52
USP13-205ENST00000497380 DDX41Q9UJV9 622 aaKnown RBP11.8□□□□□ -0.52
USP13-205ENST00000497380 ZHX1Q9UKY1 873 aaPredicted RBP11.8□□□□□ -0.52
USP13-205ENST00000497380 FAM184BQ9ULE4 1060 aa11.8□□□□□ -0.52
USP13-205ENST00000497380 DOCK3Q8IZD9 2030 aa11.8□□□□□ -0.52
USP13-205ENST00000497380 TCHHQ07283 1943 aa11.8□□□□□ -0.52
USP13-205ENST00000497380 CASP8AP2Q9UKL3 1982 aa11.79□□□□□ -0.52
USP13-205ENST00000497380 DKC1O60832 514 aaKnown RBP eCLIP11.79□□□□□ -0.52
USP13-205ENST00000497380 KCNA2P16389 499 aa11.79□□□□□ -0.52
USP13-205ENST00000497380 CMA1P23946 247 aa11.79□□□□□ -0.52
USP13-205ENST00000497380 SFNP31947 248 aa11.79□□□□□ -0.52
USP13-205ENST00000497380 CYP2C19P33261 490 aa11.79□□□□□ -0.52
USP13-205ENST00000497380 UBA7P41226 1012 aa11.79□□□□□ -0.52
USP13-205ENST00000497380 JAK3P52333 1124 aa11.79□□□□□ -0.52
USP13-205ENST00000497380 PPP2R5CQ13362 524 aa11.79□□□□□ -0.52
USP13-205ENST00000497380 LAMC2Q13753 1193 aa11.79□□□□□ -0.52
USP13-205ENST00000497380 PKN2Q16513 984 aaKnown RBP11.79□□□□□ -0.52
USP13-205ENST00000497380 KRT79Q5XKE5 535 aa11.79□□□□□ -0.52
USP13-205ENST00000497380 HAUS3Q68CZ6 603 aa11.79□□□□□ -0.52
USP13-205ENST00000497380 ZNF746Q6NUN9 644 aaPredicted RBP11.79□□□□□ -0.52
USP13-205ENST00000497380 TAPT1Q6NXT6 567 aa11.79□□□□□ -0.52
USP13-205ENST00000497380 DHX37Q8IY37 1157 aaKnown RBP11.79□□□□□ -0.52
USP13-205ENST00000497380 SMAP1Q8IYB5 467 aaPredicted RBP11.79□□□□□ -0.52
USP13-205ENST00000497380 CCDC34Q96HJ3 373 aa11.79□□□□□ -0.52
USP13-205ENST00000497380 CHAMP1Q96JM3 812 aa11.79□□□□□ -0.52
USP13-205ENST00000497380 CSRNP2Q9H175 543 aa11.79□□□□□ -0.52
USP13-205ENST00000497380 FLRT1Q9NZU1 646 aa11.79□□□□□ -0.52
USP13-205ENST00000497380 SLC9A2Q9UBY0 812 aa11.79□□□□□ -0.52
USP13-205ENST00000497380 CCDC39Q9UFE4 941 aa11.79□□□□□ -0.52
USP13-205ENST00000497380 WDR64B1ANS9 1081 aa11.78□□□□□ -0.52
USP13-205ENST00000497380 GGPS1O95749 300 aa11.78□□□□□ -0.52
USP13-205ENST00000497380 GH1P01241 217 aa11.78□□□□□ -0.52
USP13-205ENST00000497380 IGHA2P01877 340 aa11.78□□□□□ -0.52
USP13-205ENST00000497380 AKR1A1P14550 325 aa11.78□□□□□ -0.52
USP13-205ENST00000497380 MUTP22033 750 aa11.78□□□□□ -0.52
USP13-205ENST00000497380 GRK4P32298 578 aa11.78□□□□□ -0.52
USP13-205ENST00000497380 TNFAIP2Q03169 654 aa11.78□□□□□ -0.52
USP13-205ENST00000497380 SEMA3FQ13275 785 aa11.78□□□□□ -0.52
USP13-205ENST00000497380 CCDC144BQ3MJ40 725 aa11.78□□□□□ -0.52
USP13-205ENST00000497380 DUSP28Q4G0W2 176 aa11.78□□□□□ -0.52
USP13-205ENST00000497380 BRDTQ58F21 947 aaPredicted RBP11.78□□□□□ -0.52
USP13-205ENST00000497380 AXDND1Q5T1B0 1012 aaPredicted RBP11.78□□□□□ -0.52
USP13-205ENST00000497380 CCDC62Q6P9F0 684 aa11.78□□□□□ -0.52
USP13-205ENST00000497380 METTL7BQ6UX53 244 aa11.78□□□□□ -0.52
USP13-205ENST00000497380 CCDC73Q6ZRK6 1079 aa11.78□□□□□ -0.52
USP13-205ENST00000497380 MIER3Q7Z3K6 550 aa11.78□□□□□ -0.52
USP13-205ENST00000497380 CTU1Q7Z7A3 348 aaKnown RBP11.78□□□□□ -0.52
USP13-205ENST00000497380 NEK9Q8TD19 979 aa11.78□□□□□ -0.52
USP13-205ENST00000497380 TRIB2Q92519 343 aa11.78□□□□□ -0.52
USP13-205ENST00000497380 CALML4Q96GE6 196 aa11.78□□□□□ -0.52
USP13-205ENST00000497380 KATNBL1Q9H079 304 aa11.78□□□□□ -0.52
USP13-205ENST00000497380 JPH1Q9HDC5 661 aaPredicted RBP11.78□□□□□ -0.52
USP13-205ENST00000497380 PKD2L1Q9P0L9 805 aa11.78□□□□□ -0.52
USP13-205ENST00000497380 PTPN22Q9Y2R2 807 aa11.78□□□□□ -0.52
USP13-205ENST00000497380 Q9Y3F1 56 aa11.78□□□□□ -0.52
USP13-205ENST00000497380 SAMM50Q9Y512 469 aa11.78□□□□□ -0.52
USP13-205ENST00000497380 NOP56O00567 594 aaKnown RBP11.77□□□□□ -0.53
USP13-205ENST00000497380 DHX15O43143 795 aaKnown RBP11.77□□□□□ -0.53
USP13-205ENST00000497380 MSCO60682 206 aa11.77□□□□□ -0.53
USP13-205ENST00000497380 ATP9AO75110 1047 aa11.77□□□□□ -0.53
USP13-205ENST00000497380 MBD3O95983 291 aa11.77□□□□□ -0.53
USP13-205ENST00000497380 ZNF865P0CJ78 1059 aaPredicted RBP11.77□□□□□ -0.53
USP13-205ENST00000497380 UBA1P22314 1058 aaKnown RBP11.77□□□□□ -0.53
USP13-205ENST00000497380 ADCYAP1R1P41586 468 aa11.77□□□□□ -0.53
USP13-205ENST00000497380 ITGB3BPQ13352 177 aaPredicted RBP11.77□□□□□ -0.53
USP13-205ENST00000497380 EPHA7Q15375 998 aa11.77□□□□□ -0.53
USP13-205ENST00000497380 LY6KQ17RY6 165 aa11.77□□□□□ -0.53
USP13-205ENST00000497380 SKOR2Q2VWA4 1001 aaPredicted RBP11.77□□□□□ -0.53
USP13-205ENST00000497380 CELF3Q5SZQ8 465 aaKnown RBP11.77□□□□□ -0.53
USP13-205ENST00000497380 RESP18Q5W5W9 173 aa11.77□□□□□ -0.53
USP13-205ENST00000497380 NCAPH2Q6IBW4 605 aa11.77□□□□□ -0.53
USP13-205ENST00000497380 MIS18BP1Q6P0N0 1132 aa11.77□□□□□ -0.53
USP13-205ENST00000497380 CYFIP1Q7L576 1253 aa11.77□□□□□ -0.53
USP13-205ENST00000497380 RASSF8Q8NHQ8 419 aa11.77□□□□□ -0.53
USP13-205ENST00000497380 MRPS27Q92552 414 aaKnown RBP11.77□□□□□ -0.53
USP13-205ENST00000497380 EMID1Q96A84 441 aaPredicted RBP11.77□□□□□ -0.53
USP13-205ENST00000497380 CDK5RAP3Q96JB5 506 aa11.77□□□□□ -0.53
USP13-205ENST00000497380 CLIC6Q96NY7 704 aa11.77□□□□□ -0.53
USP13-205ENST00000497380 CCSER1Q9C0I3 900 aa11.77□□□□□ -0.53
USP13-205ENST00000497380 NT5C3AQ9H0P0 336 aa11.77□□□□□ -0.53
USP13-205ENST00000497380 AP5M1Q9H0R1 490 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms