RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 CCDC189A1A4V9 331 aa4.73□□□□□ -1.65
EXOSC3-208ENST00000496910 C2orf71A6NGG8 1288 aa4.73□□□□□ -1.65
EXOSC3-208ENST00000496910 HMGB1P1B2RPK0 211 aaPredicted RBP4.73□□□□□ -1.65
EXOSC3-208ENST00000496910 WDHD1O75717 1129 aaPredicted RBP4.73□□□□□ -1.65
EXOSC3-208ENST00000496910 HPXP02790 462 aa4.73□□□□□ -1.65
EXOSC3-208ENST00000496910 GSTM1P09488 218 aa4.73□□□□□ -1.65
EXOSC3-208ENST00000496910 PABPC1P11940 636 aaKnown RBP4.73□□□□□ -1.65
EXOSC3-208ENST00000496910 HOXC12P31275 282 aa4.73□□□□□ -1.65
EXOSC3-208ENST00000496910 PDE6BP35913 854 aa4.73□□□□□ -1.65
EXOSC3-208ENST00000496910 ERVFC1P60507 584 aa4.73□□□□□ -1.65
EXOSC3-208ENST00000496910 EXOSC10Q01780 885 aaKnown RBP4.73□□□□□ -1.65
EXOSC3-208ENST00000496910 HSP90AA2PQ14568 343 aaPredicted RBP4.73□□□□□ -1.65
EXOSC3-208ENST00000496910 PLCL1Q15111 1095 aa4.73□□□□□ -1.65
EXOSC3-208ENST00000496910 TIGD5Q53EQ6 642 aa4.73□□□□□ -1.65
EXOSC3-208ENST00000496910 FAM209AQ5JX71 171 aa4.73□□□□□ -1.65
EXOSC3-208ENST00000496910 ACBD5Q5T8D3 534 aaPredicted RBP4.73□□□□□ -1.65
EXOSC3-208ENST00000496910 CWF19L1Q69YN2 538 aaKnown RBP4.73□□□□□ -1.65
EXOSC3-208ENST00000496910 C16orf86Q6ZW13 317 aa4.73□□□□□ -1.65
EXOSC3-208ENST00000496910 KRT26Q7Z3Y9 468 aa4.73□□□□□ -1.65
EXOSC3-208ENST00000496910 WAPLQ7Z5K2 1190 aa4.73□□□□□ -1.65
EXOSC3-208ENST00000496910 WDR75Q8IWA0 830 aaKnown RBP4.73□□□□□ -1.65
EXOSC3-208ENST00000496910 RELTQ969Z4 430 aa4.73□□□□□ -1.65
EXOSC3-208ENST00000496910 SHISA4Q96DD7 197 aa4.73□□□□□ -1.65
EXOSC3-208ENST00000496910 PTCHD1Q96NR3 888 aa4.73□□□□□ -1.65
EXOSC3-208ENST00000496910 CEP89Q96ST8 783 aa4.73□□□□□ -1.65
EXOSC3-208ENST00000496910 PLCD4Q9BRC7 762 aa4.73□□□□□ -1.65
EXOSC3-208ENST00000496910 GPRC5CQ9NQ84 441 aa4.73□□□□□ -1.65
EXOSC3-208ENST00000496910 CHST12Q9NRB3 414 aa4.73□□□□□ -1.65
EXOSC3-208ENST00000496910 NPFFR2Q9Y5X5 522 aa4.73□□□□□ -1.65
EXOSC3-208ENST00000496910 ZMYM3Q14202 1370 aa4.73□□□□□ -1.65
EXOSC3-208ENST00000496910 MAP3K5Q99683 1374 aa4.73□□□□□ -1.65
EXOSC3-208ENST00000496910 CAMSAP2Q08AD1 1489 aa4.73□□□□□ -1.65
EXOSC3-208ENST00000496910 GLI3P10071 1580 aa4.73□□□□□ -1.65
EXOSC3-208ENST00000496910 MROH2AA6NES4 1674 aa4.73□□□□□ -1.65
EXOSC3-208ENST00000496910 TRAV20A0A0B4J274 112 aa4.72□□□□□ -1.65
EXOSC3-208ENST00000496910 AGRPO00253 132 aa4.72□□□□□ -1.65
EXOSC3-208ENST00000496910 PRODHO43272 600 aa4.72□□□□□ -1.65
EXOSC3-208ENST00000496910 TSPAN6O43657 245 aa4.72□□□□□ -1.65
EXOSC3-208ENST00000496910 KRT37O76014 449 aa4.72□□□□□ -1.65
EXOSC3-208ENST00000496910 LDHAP00338 332 aaKnown RBP4.72□□□□□ -1.65
EXOSC3-208ENST00000496910 HSPA8P11142 646 aaKnown RBP4.72□□□□□ -1.65
EXOSC3-208ENST00000496910 PLS3P13797 630 aa4.72□□□□□ -1.65
EXOSC3-208ENST00000496910 YBX3P16989 372 aaKnown RBP eCLIP4.72□□□□□ -1.65
EXOSC3-208ENST00000496910 RPL10P27635 214 aaKnown RBP4.72□□□□□ -1.65
EXOSC3-208ENST00000496910 GDNFP39905 211 aa4.72□□□□□ -1.65
EXOSC3-208ENST00000496910 SOX10P56693 466 aa4.72□□□□□ -1.65
EXOSC3-208ENST00000496910 NR0B2Q15466 257 aa4.72□□□□□ -1.65
EXOSC3-208ENST00000496910 NFE2Q16621 373 aaPredicted RBP4.72□□□□□ -1.65
EXOSC3-208ENST00000496910 TMEM67Q5HYA8 995 aa4.72□□□□□ -1.65
EXOSC3-208ENST00000496910 EEF1DP3Q658K8 133 aa4.72□□□□□ -1.65
EXOSC3-208ENST00000496910 TP53INP2Q8IXH6 220 aa4.72□□□□□ -1.65
EXOSC3-208ENST00000496910 FLAD1Q8NFF5 587 aa4.72□□□□□ -1.65
EXOSC3-208ENST00000496910 PNISRQ8TF01 805 aaKnown RBP4.72□□□□□ -1.65
EXOSC3-208ENST00000496910 PPP1R14AQ96A00 147 aa4.72□□□□□ -1.65
EXOSC3-208ENST00000496910 P2RX7Q99572 595 aaKnown RBP4.72□□□□□ -1.65
EXOSC3-208ENST00000496910 FEZ1Q99689 392 aa4.72□□□□□ -1.65
EXOSC3-208ENST00000496910 CDADC1Q9BWV3 514 aa4.72□□□□□ -1.65
EXOSC3-208ENST00000496910 PDGFDQ9GZP0 370 aaPredicted RBP4.72□□□□□ -1.65
EXOSC3-208ENST00000496910 LRP2BPQ9P2M1 347 aa4.72□□□□□ -1.65
EXOSC3-208ENST00000496910 COMMD10Q9Y6G5 202 aa4.72□□□□□ -1.65
EXOSC3-208ENST00000496910 ATRXP46100 2492 aa4.72□□□□□ -1.65
EXOSC3-208ENST00000496910 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.72□□□□□ -1.65
EXOSC3-208ENST00000496910 SETXQ7Z333 2677 aaKnown RBP4.71□□□□□ -1.65
EXOSC3-208ENST00000496910 KIF3BO15066 747 aa4.71□□□□□ -1.66
EXOSC3-208ENST00000496910 PPP1R11O60927 126 aaPredicted RBP4.71□□□□□ -1.66
EXOSC3-208ENST00000496910 USP2O75604 605 aaPredicted RBP4.71□□□□□ -1.66
EXOSC3-208ENST00000496910 SNRPB2P08579 225 aaKnown RBP4.71□□□□□ -1.66
EXOSC3-208ENST00000496910 ITGB5P18084 799 aa4.71□□□□□ -1.66
EXOSC3-208ENST00000496910 ENDOUP21128 410 aaKnown RBP4.71□□□□□ -1.66
EXOSC3-208ENST00000496910 L1CAMP32004 1257 aa4.71□□□□□ -1.66
EXOSC3-208ENST00000496910 KIR2DL1P43626 348 aaPredicted RBP4.71□□□□□ -1.66
EXOSC3-208ENST00000496910 KIR2DL2P43627 348 aaPredicted RBP4.71□□□□□ -1.66
EXOSC3-208ENST00000496910 NOP2P46087 812 aaKnown RBP4.71□□□□□ -1.66
EXOSC3-208ENST00000496910 DHX8Q14562 1220 aaKnown RBP4.71□□□□□ -1.66
EXOSC3-208ENST00000496910 KIR3DS1Q14943 382 aa4.71□□□□□ -1.66
EXOSC3-208ENST00000496910 LRRC41Q15345 812 aa4.71□□□□□ -1.66
EXOSC3-208ENST00000496910 INF2Q27J81 1249 aa4.71□□□□□ -1.66
EXOSC3-208ENST00000496910 SYCP2LQ5T4T6 812 aa4.71□□□□□ -1.66
EXOSC3-208ENST00000496910 CYP2R1Q6VVX0 501 aa4.71□□□□□ -1.66
EXOSC3-208ENST00000496910 PDZD8Q8NEN9 1154 aa4.71□□□□□ -1.66
EXOSC3-208ENST00000496910 PI4K2BQ8TCG2 481 aa4.71□□□□□ -1.66
EXOSC3-208ENST00000496910 CCDC140Q96MF4 163 aa4.71□□□□□ -1.66
EXOSC3-208ENST00000496910 JMJD8Q96S16 334 aa4.71□□□□□ -1.66
EXOSC3-208ENST00000496910 MMP19Q99542 508 aa4.71□□□□□ -1.66
EXOSC3-208ENST00000496910 MPHOSPH6Q99547 160 aaKnown RBP4.71□□□□□ -1.66
EXOSC3-208ENST00000496910 CLEC1BQ9P126 229 aa4.71□□□□□ -1.66
EXOSC3-208ENST00000496910 TNFRSF10DQ9UBN6 386 aa4.71□□□□□ -1.66
EXOSC3-208ENST00000496910 FBLN5Q9UBX5 448 aa4.71□□□□□ -1.66
EXOSC3-208ENST00000496910 ATP8A1Q9Y2Q0 1164 aa4.71□□□□□ -1.66
EXOSC3-208ENST00000496910 MRPS23Q9Y3D9 190 aaKnown RBP4.71□□□□□ -1.66
EXOSC3-208ENST00000496910 EHBP1L1Q8N3D4 1523 aa4.71□□□□□ -1.66
EXOSC3-208ENST00000496910 FAM135AQ9P2D6 1515 aa4.71□□□□□ -1.66
EXOSC3-208ENST00000496910 TRIOBPQ9H2D6 2365 aa4.7□□□□□ -1.66
EXOSC3-208ENST00000496910 PARD3Q8TEW0 1356 aa4.7□□□□□ -1.66
EXOSC3-208ENST00000496910 TRBV23-1A0A0A0MS06 115 aa4.7□□□□□ -1.66
EXOSC3-208ENST00000496910 BLACEA4D250 179 aa4.7□□□□□ -1.66
EXOSC3-208ENST00000496910 NRDCO43847 1150 aa4.7□□□□□ -1.66
EXOSC3-208ENST00000496910 CPP00450 1065 aa4.7□□□□□ -1.66
EXOSC3-208ENST00000496910 HK2P52789 917 aa4.7□□□□□ -1.66
EXOSC3-208ENST00000496910 HSF5Q4G112 596 aaPredicted RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms