RNA–Protein interactions for RNA: ENST00000496756.2

PHGDH-207, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-207ENST00000496756 TANC1Q9C0D5 1861 aa15.15■□□□□ 0.02
PHGDH-207ENST00000496756 NKRFO15226 690 aaKnown RBP eCLIP15.15■□□□□ 0.02
PHGDH-207ENST00000496756 KIF5BP33176 963 aa15.15■□□□□ 0.02
PHGDH-207ENST00000496756 SSRP1Q08945 709 aaKnown RBP15.15■□□□□ 0.02
PHGDH-207ENST00000496756 TRIM29Q14134 588 aa15.15■□□□□ 0.02
PHGDH-207ENST00000496756 RCSD1Q6JBY9 416 aa15.15■□□□□ 0.02
PHGDH-207ENST00000496756 FAM178BQ8IXR5 827 aa15.15■□□□□ 0.02
PHGDH-207ENST00000496756 FANCBQ8NB91 859 aa15.15■□□□□ 0.02
PHGDH-207ENST00000496756 OR6J1Q8NGC5 347 aa15.15■□□□□ 0.02
PHGDH-207ENST00000496756 C8orf76Q96K31 380 aa15.15■□□□□ 0.02
PHGDH-207ENST00000496756 MPHOSPH6Q99547 160 aaKnown RBP15.15■□□□□ 0.02
PHGDH-207ENST00000496756 UBE2ZQ9H832 354 aaPredicted RBP15.15■□□□□ 0.02
PHGDH-207ENST00000496756 LMBRD1Q9NUN5 540 aa15.15■□□□□ 0.02
PHGDH-207ENST00000496756 CFAP45Q9UL16 551 aa15.15■□□□□ 0.02
PHGDH-207ENST00000496756 CCPG1Q9ULG6 757 aa15.15■□□□□ 0.02
PHGDH-207ENST00000496756 COL4A4P53420 1690 aaPredicted RBP15.14■□□□□ 0.01
PHGDH-207ENST00000496756 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.14■□□□□ 0.01
PHGDH-207ENST00000496756 RBM47A0AV96 593 aaKnown RBP15.14■□□□□ 0.01
PHGDH-207ENST00000496756 PARNO95453 639 aaKnown RBP15.14■□□□□ 0.01
PHGDH-207ENST00000496756 ICAM1P05362 532 aa15.14■□□□□ 0.01
PHGDH-207ENST00000496756 XBP1P17861 261 aa15.14■□□□□ 0.01
PHGDH-207ENST00000496756 GNAQP50148 359 aa15.14■□□□□ 0.01
PHGDH-207ENST00000496756 ALDH5A1P51649 535 aaPredicted RBP15.14■□□□□ 0.01
PHGDH-207ENST00000496756 TFAP4Q01664 338 aa15.14■□□□□ 0.01
PHGDH-207ENST00000496756 AKAP17AQ02040 695 aaKnown RBP15.14■□□□□ 0.01
PHGDH-207ENST00000496756 GSE1Q14687 1217 aa15.14■□□□□ 0.01
PHGDH-207ENST00000496756 LEXMQ3ZCV2 418 aa15.14■□□□□ 0.01
PHGDH-207ENST00000496756 FOXD4L5Q5VV16 416 aaPredicted RBP15.14■□□□□ 0.01
PHGDH-207ENST00000496756 BRAPQ7Z569 592 aa15.14■□□□□ 0.01
PHGDH-207ENST00000496756 ENAHQ8N8S7 591 aaPredicted RBP15.14■□□□□ 0.01
PHGDH-207ENST00000496756 CTCFLQ8NI51 663 aaPredicted RBP15.14■□□□□ 0.01
PHGDH-207ENST00000496756 CAGE1Q8TC20 777 aa15.14■□□□□ 0.01
PHGDH-207ENST00000496756 AFAP1L1Q8TED9 768 aa15.14■□□□□ 0.01
PHGDH-207ENST00000496756 FOXD4L4Q8WXT5 416 aaPredicted RBP15.14■□□□□ 0.01
PHGDH-207ENST00000496756 SYAP1Q96A49 352 aaPredicted RBP15.14■□□□□ 0.01
PHGDH-207ENST00000496756 ZNF396Q96N95 335 aaPredicted RBP15.14■□□□□ 0.01
PHGDH-207ENST00000496756 KCNH6Q9H252 994 aa15.14■□□□□ 0.01
PHGDH-207ENST00000496756 INCENPQ9NQS7 918 aa15.14■□□□□ 0.01
PHGDH-207ENST00000496756 PRR12Q9ULL5 1215 aa15.14■□□□□ 0.01
PHGDH-207ENST00000496756 TET1Q8NFU7 2136 aa15.13■□□□□ 0.01
PHGDH-207ENST00000496756 A6NJR5 290 aa15.13■□□□□ 0.01
PHGDH-207ENST00000496756 PRPF40AO75400 957 aaKnown RBP15.13■□□□□ 0.01
PHGDH-207ENST00000496756 DEXIO95424 95 aa15.13■□□□□ 0.01
PHGDH-207ENST00000496756 SSTR3P32745 418 aaPredicted RBP15.13■□□□□ 0.01
PHGDH-207ENST00000496756 MRE11P49959 708 aa15.13■□□□□ 0.01
PHGDH-207ENST00000496756 WDR5P61964 334 aaKnown RBP15.13■□□□□ 0.01
PHGDH-207ENST00000496756 PUS10Q3MIT2 529 aaKnown RBP15.13■□□□□ 0.01
PHGDH-207ENST00000496756 KCTD1Q719H9 257 aa15.13■□□□□ 0.01
PHGDH-207ENST00000496756 FBXO18Q8NFZ0 1043 aa15.13■□□□□ 0.01
PHGDH-207ENST00000496756 GDPD5Q8WTR4 605 aa15.13■□□□□ 0.01
PHGDH-207ENST00000496756 UIMC1Q96RL1 719 aa15.13■□□□□ 0.01
PHGDH-207ENST00000496756 TGS1Q96RS0 853 aaKnown RBP15.13■□□□□ 0.01
PHGDH-207ENST00000496756 RAD9AQ99638 391 aa15.13■□□□□ 0.01
PHGDH-207ENST00000496756 RNF26Q9BY78 433 aaPredicted RBP15.13■□□□□ 0.01
PHGDH-207ENST00000496756 KAT14Q9H8E8 782 aa15.13■□□□□ 0.01
PHGDH-207ENST00000496756 LCHNA4D1U4 455 aa15.12■□□□□ 0.01
PHGDH-207ENST00000496756 EFCAB14O75071 495 aa15.12■□□□□ 0.01
PHGDH-207ENST00000496756 ADD1P35611 737 aaKnown RBP15.12■□□□□ 0.01
PHGDH-207ENST00000496756 SNAP25P60880 206 aa15.12■□□□□ 0.01
PHGDH-207ENST00000496756 ERVK-21P61565 698 aa15.12■□□□□ 0.01
PHGDH-207ENST00000496756 BAATQ14032 418 aaPredicted RBP15.12■□□□□ 0.01
PHGDH-207ENST00000496756 NTRK3Q16288 839 aa15.12■□□□□ 0.01
PHGDH-207ENST00000496756 PTGISQ16647 500 aa15.12■□□□□ 0.01
PHGDH-207ENST00000496756 SPRED2Q7Z698 418 aa15.12■□□□□ 0.01
PHGDH-207ENST00000496756 FAM177A1Q8N128 213 aaPredicted RBP15.12■□□□□ 0.01
PHGDH-207ENST00000496756 SCFD2Q8WU76 684 aa15.12■□□□□ 0.01
PHGDH-207ENST00000496756 PURBQ96QR8 312 aaKnown RBP15.12■□□□□ 0.01
PHGDH-207ENST00000496756 LZTS2Q9BRK4 669 aa15.12■□□□□ 0.01
PHGDH-207ENST00000496756 ZKSCAN3Q9BRR0 538 aa15.12■□□□□ 0.01
PHGDH-207ENST00000496756 SUGCTQ9HAC7 445 aa15.12■□□□□ 0.01
PHGDH-207ENST00000496756 STX8Q9UNK0 236 aa15.12■□□□□ 0.01
PHGDH-207ENST00000496756 LCTP09848 1927 aa15.11■□□□□ 0.01
PHGDH-207ENST00000496756 ABHD14A-ACY1A0A1B0GW23 586 aa15.11■□□□□ 0.01
PHGDH-207ENST00000496756 B4DLN1 442 aa15.11■□□□□ 0.01
PHGDH-207ENST00000496756 GJB5O95377 273 aa15.11■□□□□ 0.01
PHGDH-207ENST00000496756 FDPSP14324 419 aaKnown RBP15.11■□□□□ 0.01
PHGDH-207ENST00000496756 KCNA5P22460 613 aa15.11■□□□□ 0.01
PHGDH-207ENST00000496756 MRPL12P52815 198 aaKnown RBP15.11■□□□□ 0.01
PHGDH-207ENST00000496756 UBE2HP62256 183 aa15.11■□□□□ 0.01
PHGDH-207ENST00000496756 PDE4DQ08499 809 aa15.11■□□□□ 0.01
PHGDH-207ENST00000496756 RESTQ13127 1097 aa15.11■□□□□ 0.01
PHGDH-207ENST00000496756 SAFBQ15424 915 aaKnown RBP eCLIP15.11■□□□□ 0.01
PHGDH-207ENST00000496756 CNKSR3Q6P9H4 555 aa15.11■□□□□ 0.01
PHGDH-207ENST00000496756 ALG1Q9BT22 464 aa15.11■□□□□ 0.01
PHGDH-207ENST00000496756 PNMA2Q9UL42 364 aa15.11■□□□□ 0.01
PHGDH-207ENST00000496756 TRIP12Q14669 1992 aaPredicted RBP15.11■□□□□ 0.01
PHGDH-207ENST00000496756 SELPP16109 830 aa15.1■□□□□ 0.01
PHGDH-207ENST00000496756 CDC27P30260 824 aa15.1■□□□□ 0.01
PHGDH-207ENST00000496756 TROAPQ12815 778 aa15.1■□□□□ 0.01
PHGDH-207ENST00000496756 PTCRAQ6ISU1 281 aaPredicted RBP15.1■□□□□ 0.01
PHGDH-207ENST00000496756 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.1■□□□□ 0.01
PHGDH-207ENST00000496756 RANBP17Q9H2T7 1088 aaKnown RBP15.1■□□□□ 0.01
PHGDH-207ENST00000496756 FAM217BQ9NTX9 383 aaPredicted RBP15.1■□□□□ 0.01
PHGDH-207ENST00000496756 MTUS1Q9ULD2 1270 aa15.1■□□□□ 0.01
PHGDH-207ENST00000496756 PTPRSQ13332 1948 aa15.09■□□□□ 0.01
PHGDH-207ENST00000496756 GRXCR2A6NFK2 248 aa15.09■□□□□ 0.01
PHGDH-207ENST00000496756 NFIBO00712 420 aa15.09■□□□□ 0.01
PHGDH-207ENST00000496756 PRPF3O43395 683 aaKnown RBP15.09■□□□□ 0.01
PHGDH-207ENST00000496756 TXNP10599 105 aaKnown RBP15.09■□□□□ 0.01
PHGDH-207ENST00000496756 LRRC8DQ7L1W4 858 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms