RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 CELF3Q5SZQ8 465 aaKnown RBP20.74■□□□□ 0.91
TSSC4-210ENST00000496468 TMEM63BQ5T3F8 832 aa20.74■□□□□ 0.91
TSSC4-210ENST00000496468 METTL7BQ6UX53 244 aa20.74■□□□□ 0.91
TSSC4-210ENST00000496468 DHX37Q8IY37 1157 aaKnown RBP20.74■□□□□ 0.91
TSSC4-210ENST00000496468 SLC5A5Q92911 643 aa20.74■□□□□ 0.91
TSSC4-210ENST00000496468 FAM20AQ96MK3 541 aa20.74■□□□□ 0.91
TSSC4-210ENST00000496468 USP28Q96RU2 1077 aa20.74■□□□□ 0.91
TSSC4-210ENST00000496468 TEKT3Q9BXF9 490 aa20.74■□□□□ 0.91
TSSC4-210ENST00000496468 TMEM60Q9H2L4 133 aa20.74■□□□□ 0.91
TSSC4-210ENST00000496468 JPH1Q9HDC5 661 aaPredicted RBP20.74■□□□□ 0.91
TSSC4-210ENST00000496468 CLIC4Q9Y696 253 aa20.74■□□□□ 0.91
TSSC4-210ENST00000496468 SYNRGQ9UMZ2 1314 aa20.74■□□□□ 0.91
TSSC4-210ENST00000496468 DDX39AO00148 427 aaKnown RBP20.73■□□□□ 0.91
TSSC4-210ENST00000496468 LAD1O00515 517 aa20.73■□□□□ 0.91
TSSC4-210ENST00000496468 FARP2O94887 1054 aaPredicted RBP20.73■□□□□ 0.91
TSSC4-210ENST00000496468 PTGS1P23219 599 aa20.73■□□□□ 0.91
TSSC4-210ENST00000496468 CEBPZQ03701 1054 aaKnown RBP20.73■□□□□ 0.91
TSSC4-210ENST00000496468 ARHGAP1Q07960 439 aa20.73■□□□□ 0.91
TSSC4-210ENST00000496468 PTGDRQ13258 359 aa20.73■□□□□ 0.91
TSSC4-210ENST00000496468 CYFIP1Q7L576 1253 aa20.73■□□□□ 0.91
TSSC4-210ENST00000496468 GJA10Q969M2 543 aa20.73■□□□□ 0.91
TSSC4-210ENST00000496468 RIT2Q99578 217 aa20.73■□□□□ 0.91
TSSC4-210ENST00000496468 AP5M1Q9H0R1 490 aa20.73■□□□□ 0.91
TSSC4-210ENST00000496468 MLXIPQ9HAP2 919 aa20.73■□□□□ 0.91
TSSC4-210ENST00000496468 XPNPEP3Q9NQH7 507 aa20.73■□□□□ 0.91
TSSC4-210ENST00000496468 TBC1D22BQ9NU19 505 aa20.73■□□□□ 0.91
TSSC4-210ENST00000496468 POLR3EQ9NVU0 708 aa20.73■□□□□ 0.91
TSSC4-210ENST00000496468 Q9Y3F1 56 aa20.73■□□□□ 0.91
TSSC4-210ENST00000496468 NCLP19338 710 aaKnown RBP20.72■□□□□ 0.91
TSSC4-210ENST00000496468 ATP2C1P98194 919 aaPredicted RBP20.72■□□□□ 0.91
TSSC4-210ENST00000496468 SP4Q02446 784 aa20.72■□□□□ 0.91
TSSC4-210ENST00000496468 DNM1Q05193 864 aaKnown RBP20.72■□□□□ 0.91
TSSC4-210ENST00000496468 LAMC2Q13753 1193 aa20.72■□□□□ 0.91
TSSC4-210ENST00000496468 ATL3Q6DD88 541 aa20.72■□□□□ 0.91
TSSC4-210ENST00000496468 HAS1Q92839 578 aa20.72■□□□□ 0.91
TSSC4-210ENST00000496468 EMID1Q96A84 441 aaPredicted RBP20.72■□□□□ 0.91
TSSC4-210ENST00000496468 MTMR9Q96QG7 549 aa20.72■□□□□ 0.91
TSSC4-210ENST00000496468 SPC25Q9HBM1 224 aa20.72■□□□□ 0.91
TSSC4-210ENST00000496468 SLC9A2Q9UBY0 812 aa20.72■□□□□ 0.91
TSSC4-210ENST00000496468 NOP56O00567 594 aaKnown RBP20.71■□□□□ 0.91
TSSC4-210ENST00000496468 DYNC1LI2O43237 492 aaPredicted RBP20.71■□□□□ 0.91
TSSC4-210ENST00000496468 NASPP49321 788 aaPredicted RBP20.71■□□□□ 0.91
TSSC4-210ENST00000496468 KRT85P78386 507 aa20.71■□□□□ 0.91
TSSC4-210ENST00000496468 KRT76Q01546 638 aa20.71■□□□□ 0.91
TSSC4-210ENST00000496468 PPTC7Q8NI37 304 aa20.71■□□□□ 0.91
TSSC4-210ENST00000496468 SPATA33Q96N06 139 aa20.71■□□□□ 0.91
TSSC4-210ENST00000496468 DEFB118Q96PH6 123 aa20.71■□□□□ 0.91
TSSC4-210ENST00000496468 UPF3AQ9H1J1 476 aaKnown RBP20.71■□□□□ 0.91
TSSC4-210ENST00000496468 DHX15O43143 795 aaKnown RBP20.7■□□□□ 0.9
TSSC4-210ENST00000496468 CHMP2AO43633 222 aa20.7■□□□□ 0.9
TSSC4-210ENST00000496468 PSMD10O75832 226 aa20.7■□□□□ 0.9
TSSC4-210ENST00000496468 YEATS4O95619 227 aa20.7■□□□□ 0.9
TSSC4-210ENST00000496468 C6orf222P0C671 652 aaPredicted RBP20.7■□□□□ 0.9
TSSC4-210ENST00000496468 PRPHP41219 470 aa20.7■□□□□ 0.9
TSSC4-210ENST00000496468 TXKP42681 527 aa20.7■□□□□ 0.9
TSSC4-210ENST00000496468 CPT1AP50416 773 aa20.7■□□□□ 0.9
TSSC4-210ENST00000496468 STK38Q15208 465 aa20.7■□□□□ 0.9
TSSC4-210ENST00000496468 TMEM266Q2M3C6 531 aa20.7■□□□□ 0.9
TSSC4-210ENST00000496468 COL13A1Q5TAT6 717 aaPredicted RBP20.7■□□□□ 0.9
TSSC4-210ENST00000496468 C4orf32Q8N8J7 132 aa20.7■□□□□ 0.9
TSSC4-210ENST00000496468 VAV3Q9UKW4 847 aa20.7■□□□□ 0.9
TSSC4-210ENST00000496468 CFAP45Q9UL16 551 aa20.7■□□□□ 0.9
TSSC4-210ENST00000496468 ELP1O95163 1332 aa20.7■□□□□ 0.9
TSSC4-210ENST00000496468 BRCA2P51587 3418 aa20.69■□□□□ 0.9
TSSC4-210ENST00000496468 ADAMTS4O75173 837 aa20.69■□□□□ 0.9
TSSC4-210ENST00000496468 PGK1P00558 417 aa20.69■□□□□ 0.9
TSSC4-210ENST00000496468 GJA9P57773 515 aa20.69■□□□□ 0.9
TSSC4-210ENST00000496468 PTPAQ15257 358 aa20.69■□□□□ 0.9
TSSC4-210ENST00000496468 FSCN1Q16658 493 aaKnown RBP20.69■□□□□ 0.9
TSSC4-210ENST00000496468 BRDTQ58F21 947 aaPredicted RBP20.69■□□□□ 0.9
TSSC4-210ENST00000496468 LHX8Q68G74 356 aa20.69■□□□□ 0.9
TSSC4-210ENST00000496468 ZNF746Q6NUN9 644 aaPredicted RBP20.69■□□□□ 0.9
TSSC4-210ENST00000496468 AFG1LQ8WV93 481 aa20.69■□□□□ 0.9
TSSC4-210ENST00000496468 UNC45AQ9H3U1 944 aa20.69■□□□□ 0.9
TSSC4-210ENST00000496468 BCAS3Q9H6U6 928 aa20.69■□□□□ 0.9
TSSC4-210ENST00000496468 TTC12Q9H892 705 aaPredicted RBP20.69■□□□□ 0.9
TSSC4-210ENST00000496468 TFIP11Q9UBB9 837 aaKnown RBP20.69■□□□□ 0.9
TSSC4-210ENST00000496468 WDR64B1ANS9 1081 aa20.68■□□□□ 0.9
TSSC4-210ENST00000496468 CCNE2O96020 404 aa20.68■□□□□ 0.9
TSSC4-210ENST00000496468 MYCNP04198 464 aaPredicted RBP20.68■□□□□ 0.9
TSSC4-210ENST00000496468 MMP3P08254 477 aa20.68■□□□□ 0.9
TSSC4-210ENST00000496468 PPP2R5CQ13362 524 aa20.68■□□□□ 0.9
TSSC4-210ENST00000496468 HSDL1Q3SXM5 330 aa20.68■□□□□ 0.9
TSSC4-210ENST00000496468 ARL6IP4Q66PJ3 421 aaKnown RBP20.68■□□□□ 0.9
TSSC4-210ENST00000496468 NCAPH2Q6IBW4 605 aa20.68■□□□□ 0.9
TSSC4-210ENST00000496468 SMAP1Q8IYB5 467 aaPredicted RBP20.68■□□□□ 0.9
TSSC4-210ENST00000496468 PCDHA12Q9UN75 941 aa20.68■□□□□ 0.9
TSSC4-210ENST00000496468 MYADML2A6NDP7 307 aa20.67■□□□□ 0.9
TSSC4-210ENST00000496468 GJB1P08034 283 aa20.67■□□□□ 0.9
TSSC4-210ENST00000496468 CST5P28325 142 aaPredicted RBP20.67■□□□□ 0.9
TSSC4-210ENST00000496468 JAK3P52333 1124 aa20.67■□□□□ 0.9
TSSC4-210ENST00000496468 ACTR2P61160 394 aa20.67■□□□□ 0.9
TSSC4-210ENST00000496468 SLC39A14Q15043 492 aa20.67■□□□□ 0.9
TSSC4-210ENST00000496468 DTHD1Q6ZMT9 781 aa20.67■□□□□ 0.9
TSSC4-210ENST00000496468 RNF180Q86T96 592 aa20.67■□□□□ 0.9
TSSC4-210ENST00000496468 LINC00301Q8NCQ3 95 aa20.67■□□□□ 0.9
TSSC4-210ENST00000496468 KCNG4Q8TDN1 519 aa20.67■□□□□ 0.9
TSSC4-210ENST00000496468 CHAMP1Q96JM3 812 aa20.67■□□□□ 0.9
TSSC4-210ENST00000496468 GPR20Q99678 358 aa20.67■□□□□ 0.9
TSSC4-210ENST00000496468 TMEM106CQ9BVX2 250 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms