RNA–Protein interactions for RNA: ENST00000496466.1

UBXN11-216, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-216ENST00000496466 TSGA10Q9BZW7 698 aa16.55■□□□□ 0.24
UBXN11-216ENST00000496466 ANO9A1A5B4 782 aa16.54■□□□□ 0.24
UBXN11-216ENST00000496466 MACROD2A1Z1Q3 448 aa16.54■□□□□ 0.24
UBXN11-216ENST00000496466 MSL3Q8N5Y2 521 aaKnown RBP16.54■□□□□ 0.24
UBXN11-216ENST00000496466 SECISBP2LQ93073 1101 aaKnown RBP16.54■□□□□ 0.24
UBXN11-216ENST00000496466 CSRNP1Q96S65 589 aa16.54■□□□□ 0.24
UBXN11-216ENST00000496466 NAP1L4Q99733 375 aaKnown RBP16.54■□□□□ 0.24
UBXN11-216ENST00000496466 PANK4Q9NVE7 773 aa16.54■□□□□ 0.24
UBXN11-216ENST00000496466 ATRNL1Q5VV63 1379 aa16.54■□□□□ 0.24
UBXN11-216ENST00000496466 ERICH4A6NGS2 130 aa16.54■□□□□ 0.24
UBXN11-216ENST00000496466 TCP10L2B9ZVM9 353 aa16.54■□□□□ 0.24
UBXN11-216ENST00000496466 RAD17O75943 681 aa16.54■□□□□ 0.24
UBXN11-216ENST00000496466 NDUFB10O96000 172 aa16.54■□□□□ 0.24
UBXN11-216ENST00000496466 EIF4A3P38919 411 aaKnown RBP16.54■□□□□ 0.24
UBXN11-216ENST00000496466 ZCWPW2Q504Y3 356 aa16.54■□□□□ 0.24
UBXN11-216ENST00000496466 CAPZA3Q96KX2 299 aa16.54■□□□□ 0.24
UBXN11-216ENST00000496466 PDE11AQ9HCR9 933 aa16.54■□□□□ 0.24
UBXN11-216ENST00000496466 PCDHA13Q9Y5I0 950 aa16.54■□□□□ 0.24
UBXN11-216ENST00000496466 LCA5LO95447 670 aa16.53■□□□□ 0.24
UBXN11-216ENST00000496466 CKAP4Q07065 602 aaKnown RBP16.53■□□□□ 0.24
UBXN11-216ENST00000496466 FAM26FQ5R3K3 315 aa16.53■□□□□ 0.24
UBXN11-216ENST00000496466 RRAGAQ7L523 313 aa16.53■□□□□ 0.24
UBXN11-216ENST00000496466 BAP1Q92560 729 aa16.53■□□□□ 0.24
UBXN11-216ENST00000496466 NT5C3AQ9H0P0 336 aa16.53■□□□□ 0.24
UBXN11-216ENST00000496466 KDM3AQ9Y4C1 1321 aa16.53■□□□□ 0.24
UBXN11-216ENST00000496466 CLRN2A0PK11 232 aa16.53■□□□□ 0.24
UBXN11-216ENST00000496466 LRRC53A6NM62 1247 aa16.53■□□□□ 0.24
UBXN11-216ENST00000496466 E9PMD0 336 aa16.53■□□□□ 0.24
UBXN11-216ENST00000496466 SSBP05455 408 aaKnown RBP eCLIP16.53■□□□□ 0.24
UBXN11-216ENST00000496466 ERCC3P19447 782 aa16.53■□□□□ 0.24
UBXN11-216ENST00000496466 KIF11P52732 1056 aa16.53■□□□□ 0.24
UBXN11-216ENST00000496466 RBM26Q5T8P6 1007 aaKnown RBP16.53■□□□□ 0.24
UBXN11-216ENST00000496466 GLT8D2Q9H1C3 349 aa16.53■□□□□ 0.24
UBXN11-216ENST00000496466 BMP2KQ9NSY1 1161 aaPredicted RBP16.53■□□□□ 0.24
UBXN11-216ENST00000496466 KIAA1024Q9UPX6 916 aa16.53■□□□□ 0.24
UBXN11-216ENST00000496466 A0A1W2PRG0 241 aa16.52■□□□□ 0.24
UBXN11-216ENST00000496466 USO1O60763 962 aaKnown RBP16.52■□□□□ 0.24
UBXN11-216ENST00000496466 TAL1P17542 331 aaPredicted RBP16.52■□□□□ 0.24
UBXN11-216ENST00000496466 FKBP3Q00688 224 aaKnown RBP16.52■□□□□ 0.24
UBXN11-216ENST00000496466 KCNMA1Q12791 1236 aa16.52■□□□□ 0.24
UBXN11-216ENST00000496466 CASP8Q14790 479 aa16.52■□□□□ 0.24
UBXN11-216ENST00000496466 GMCL1P1Q8NEA9 526 aa16.52■□□□□ 0.24
UBXN11-216ENST00000496466 SMCR8Q8TEV9 937 aaPredicted RBP16.52■□□□□ 0.24
UBXN11-216ENST00000496466 RPGRIP1Q96KN7 1286 aa16.52■□□□□ 0.24
UBXN11-216ENST00000496466 FGFBP2Q9BYJ0 223 aa16.52■□□□□ 0.24
UBXN11-216ENST00000496466 IFIH1Q9BYX4 1025 aaKnown RBP16.52■□□□□ 0.24
UBXN11-216ENST00000496466 SH2D4AQ9H788 454 aa16.52■□□□□ 0.24
UBXN11-216ENST00000496466 KCNMB3Q9NPA1 279 aa16.52■□□□□ 0.24
UBXN11-216ENST00000496466 COL4A3BPQ9Y5P4 624 aa16.52■□□□□ 0.24
UBXN11-216ENST00000496466 TRAF5O00463 557 aa16.52■□□□□ 0.23
UBXN11-216ENST00000496466 ZNF185O15231 689 aa16.52■□□□□ 0.23
UBXN11-216ENST00000496466 PLA2G4BP0C869 781 aa16.52■□□□□ 0.23
UBXN11-216ENST00000496466 USP11P51784 963 aa16.52■□□□□ 0.23
UBXN11-216ENST00000496466 IKQ13123 557 aaPredicted RBP16.52■□□□□ 0.23
UBXN11-216ENST00000496466 PDXDC1Q6P996 788 aa16.52■□□□□ 0.23
UBXN11-216ENST00000496466 RSBN1LQ6PCB5 846 aaPredicted RBP16.52■□□□□ 0.23
UBXN11-216ENST00000496466 CCDC155Q8N6L0 562 aa16.52■□□□□ 0.23
UBXN11-216ENST00000496466 TTLL6Q8N841 843 aa16.52■□□□□ 0.23
UBXN11-216ENST00000496466 NEK11Q8NG66 645 aa16.52■□□□□ 0.23
UBXN11-216ENST00000496466 P2RX7Q99572 595 aaKnown RBP16.52■□□□□ 0.23
UBXN11-216ENST00000496466 ANO3Q9BYT9 981 aa16.52■□□□□ 0.23
UBXN11-216ENST00000496466 EDEM3Q9BZQ6 932 aa16.52■□□□□ 0.23
UBXN11-216ENST00000496466 TANGO6Q9C0B7 1094 aa16.52■□□□□ 0.23
UBXN11-216ENST00000496466 ZNF277Q9NRM2 450 aaPredicted RBP16.52■□□□□ 0.23
UBXN11-216ENST00000496466 TBC1D7Q9P0N9 293 aa16.52■□□□□ 0.23
UBXN11-216ENST00000496466 PCDHA2Q9Y5H9 948 aa16.52■□□□□ 0.23
UBXN11-216ENST00000496466 CYP3A7-CYP3A51PA0A087WV96 503 aa16.51■□□□□ 0.23
UBXN11-216ENST00000496466 POTEB3A0JP26 581 aa16.51■□□□□ 0.23
UBXN11-216ENST00000496466 SPDYE2BA6NHP3 402 aa16.51■□□□□ 0.23
UBXN11-216ENST00000496466 POTECB2RU33 542 aa16.51■□□□□ 0.23
UBXN11-216ENST00000496466 PDE2AO00408 941 aaPredicted RBP16.51■□□□□ 0.23
UBXN11-216ENST00000496466 MEIS2O14770 477 aa16.51■□□□□ 0.23
UBXN11-216ENST00000496466 EIF3JO75822 258 aaKnown RBP16.51■□□□□ 0.23
UBXN11-216ENST00000496466 SPDYE6P0CI01 402 aa16.51■□□□□ 0.23
UBXN11-216ENST00000496466 CYP3A7P24462 503 aa16.51■□□□□ 0.23
UBXN11-216ENST00000496466 GYS2P54840 703 aa16.51■□□□□ 0.23
UBXN11-216ENST00000496466 GPS2Q13227 327 aa16.51■□□□□ 0.23
UBXN11-216ENST00000496466 USH1GQ495M9 461 aa16.51■□□□□ 0.23
UBXN11-216ENST00000496466 POTEBQ6S5H4 581 aa16.51■□□□□ 0.23
UBXN11-216ENST00000496466 CCDC65Q8IXS2 484 aa16.51■□□□□ 0.23
UBXN11-216ENST00000496466 SPICE1Q8N0Z3 855 aa16.51■□□□□ 0.23
UBXN11-216ENST00000496466 GMCL1Q96IK5 515 aa16.51■□□□□ 0.23
UBXN11-216ENST00000496466 MBOAT7Q96N66 472 aa16.51■□□□□ 0.23
UBXN11-216ENST00000496466 DEF6Q9H4E7 631 aa16.51■□□□□ 0.23
UBXN11-216ENST00000496466 MLXIPQ9HAP2 919 aa16.51■□□□□ 0.23
UBXN11-216ENST00000496466 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.51■□□□□ 0.23
UBXN11-216ENST00000496466 RNF216Q9NWF9 866 aaPredicted RBP16.51■□□□□ 0.23
UBXN11-216ENST00000496466 ZBTB12Q9Y330 459 aaPredicted RBP16.51■□□□□ 0.23
UBXN11-216ENST00000496466 NPHP3-ACAD11A0A0J9YXS1 232 aa16.51■□□□□ 0.23
UBXN11-216ENST00000496466 CCDC66A2RUB6 948 aa16.51■□□□□ 0.23
UBXN11-216ENST00000496466 TACC1O75410 805 aa16.51■□□□□ 0.23
UBXN11-216ENST00000496466 CCDC40Q4G0X9 1142 aa16.51■□□□□ 0.23
UBXN11-216ENST00000496466 GPIHBP1Q8IV16 184 aa16.51■□□□□ 0.23
UBXN11-216ENST00000496466 LARGE2Q8N3Y3 721 aa16.51■□□□□ 0.23
UBXN11-216ENST00000496466 TRIM58Q8NG06 486 aa16.51■□□□□ 0.23
UBXN11-216ENST00000496466 CAGE1Q8TC20 777 aa16.51■□□□□ 0.23
UBXN11-216ENST00000496466 JADE2Q9NQC1 790 aa16.51■□□□□ 0.23
UBXN11-216ENST00000496466 CAPN6Q9Y6Q1 641 aa16.51■□□□□ 0.23
UBXN11-216ENST00000496466 TARSL2A2RTX5 802 aaKnown RBP16.5■□□□□ 0.23
UBXN11-216ENST00000496466 SLC26A4O43511 780 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms