RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 Q8N1Y9 231 aa5.67□□□□□ -1.5
CLK1-214ENST00000496205 YIPF4Q9BSR8 244 aa5.67□□□□□ -1.5
CLK1-214ENST00000496205 TMEFF2Q9UIK5 374 aaPredicted RBP5.67□□□□□ -1.5
CLK1-214ENST00000496205 FBXL7Q9UJT9 491 aa5.67□□□□□ -1.5
CLK1-214ENST00000496205 CROTQ9UKG9 612 aa5.67□□□□□ -1.5
CLK1-214ENST00000496205 ZDHHC9Q9Y397 364 aa5.67□□□□□ -1.5
CLK1-214ENST00000496205 TIMM13Q9Y5L4 95 aaPredicted RBP5.67□□□□□ -1.5
CLK1-214ENST00000496205 ANKRD34BA5PLL1 514 aa5.66□□□□□ -1.5
CLK1-214ENST00000496205 FAM221BA6H8Z2 402 aa5.66□□□□□ -1.5
CLK1-214ENST00000496205 LRG1P02750 347 aa5.66□□□□□ -1.5
CLK1-214ENST00000496205 BCL6P41182 706 aa5.66□□□□□ -1.5
CLK1-214ENST00000496205 RASA3Q14644 834 aa5.66□□□□□ -1.5
CLK1-214ENST00000496205 GTF2IRD2BQ6EKJ0 949 aa5.66□□□□□ -1.5
CLK1-214ENST00000496205 TEPPQ6URK8 271 aa5.66□□□□□ -1.5
CLK1-214ENST00000496205 GTF2IRD2Q86UP8 949 aa5.66□□□□□ -1.5
CLK1-214ENST00000496205 JAZF1Q86VZ6 243 aa5.66□□□□□ -1.5
CLK1-214ENST00000496205 CCDC103Q8IW40 242 aa5.66□□□□□ -1.5
CLK1-214ENST00000496205 CKAP2LQ8IYA6 745 aa5.66□□□□□ -1.5
CLK1-214ENST00000496205 KLHL36Q8N4N3 616 aa5.66□□□□□ -1.5
CLK1-214ENST00000496205 BVESQ8NE79 360 aa5.66□□□□□ -1.5
CLK1-214ENST00000496205 TRMT2BQ96GJ1 504 aaKnown RBP5.66□□□□□ -1.5
CLK1-214ENST00000496205 TOE1Q96GM8 510 aaKnown RBP5.66□□□□□ -1.5
CLK1-214ENST00000496205 CLIC6Q96NY7 704 aa5.66□□□□□ -1.5
CLK1-214ENST00000496205 DTLQ9NZJ0 730 aa5.66□□□□□ -1.5
CLK1-214ENST00000496205 CDK11AQ9UQ88 783 aaPredicted RBP5.66□□□□□ -1.5
CLK1-214ENST00000496205 ZNF652Q9Y2D9 606 aa5.66□□□□□ -1.5
CLK1-214ENST00000496205 TBX22Q9Y458 520 aa5.66□□□□□ -1.5
CLK1-214ENST00000496205 TCRBV5S2A0A599 114 aa5.65□□□□□ -1.5
CLK1-214ENST00000496205 B2RBV5 119 aa5.65□□□□□ -1.5
CLK1-214ENST00000496205 NPIPB8E9PQR5 432 aa5.65□□□□□ -1.5
CLK1-214ENST00000496205 RPL11P62913 178 aaKnown RBP5.65□□□□□ -1.5
CLK1-214ENST00000496205 NFATC3Q12968 1075 aa5.65□□□□□ -1.5
CLK1-214ENST00000496205 PPP2R5EQ16537 467 aa5.65□□□□□ -1.5
CLK1-214ENST00000496205 IGFL4Q6B9Z1 124 aa5.65□□□□□ -1.5
CLK1-214ENST00000496205 CYP26B1Q9NR63 512 aa5.65□□□□□ -1.5
CLK1-214ENST00000496205 RBPJLQ9UBG7 517 aa5.65□□□□□ -1.5
CLK1-214ENST00000496205 COL6A1P12109 1028 aa5.64□□□□□ -1.51
CLK1-214ENST00000496205 RBM10P98175 930 aaKnown RBP5.64□□□□□ -1.51
CLK1-214ENST00000496205 NBPF6Q5VWK0 638 aa5.64□□□□□ -1.51
CLK1-214ENST00000496205 VHLLQ6RSH7 139 aa5.64□□□□□ -1.51
CLK1-214ENST00000496205 TRIM59Q8IWR1 403 aa5.64□□□□□ -1.51
CLK1-214ENST00000496205 NUDT10Q8NFP7 164 aa5.64□□□□□ -1.51
CLK1-214ENST00000496205 NUDT11Q96G61 164 aa5.64□□□□□ -1.51
CLK1-214ENST00000496205 MRGPRX3Q96LB0 322 aa5.64□□□□□ -1.51
CLK1-214ENST00000496205 NBPF4Q96M43 638 aa5.64□□□□□ -1.51
CLK1-214ENST00000496205 GNRHR2Q96P88 292 aa5.64□□□□□ -1.51
CLK1-214ENST00000496205 ZNF341Q9BYN7 854 aa5.64□□□□□ -1.51
CLK1-214ENST00000496205 NKX2-4Q9H2Z4 354 aa5.64□□□□□ -1.51
CLK1-214ENST00000496205 SEMA4AQ9H3S1 761 aa5.64□□□□□ -1.51
CLK1-214ENST00000496205 ST7Q9NRC1 585 aa5.64□□□□□ -1.51
CLK1-214ENST00000496205 SNTG2Q9NY99 539 aa5.64□□□□□ -1.51
CLK1-214ENST00000496205 MSRB2Q9Y3D2 182 aa5.64□□□□□ -1.51
CLK1-214ENST00000496205 HGSO14964 777 aaPredicted RBP5.63□□□□□ -1.51
CLK1-214ENST00000496205 TADA3O75528 432 aa5.63□□□□□ -1.51
CLK1-214ENST00000496205 CNOT4O95628 575 aaKnown RBP5.63□□□□□ -1.51
CLK1-214ENST00000496205 TGM1P22735 817 aa5.63□□□□□ -1.51
CLK1-214ENST00000496205 FHL2Q14192 279 aa5.63□□□□□ -1.51
CLK1-214ENST00000496205 MRM1Q6IN84 353 aaKnown RBP5.63□□□□□ -1.51
CLK1-214ENST00000496205 TRMT10BQ6PF06 316 aaKnown RBP5.63□□□□□ -1.51
CLK1-214ENST00000496205 TMC5Q6UXY8 1006 aa5.63□□□□□ -1.51
CLK1-214ENST00000496205 NOP9Q86U38 636 aaKnown RBP5.63□□□□□ -1.51
CLK1-214ENST00000496205 APBA2Q99767 749 aa5.63□□□□□ -1.51
CLK1-214ENST00000496205 KANSL2Q9H9L4 492 aa5.63□□□□□ -1.51
CLK1-214ENST00000496205 ACTR10Q9NZ32 417 aa5.63□□□□□ -1.51
CLK1-214ENST00000496205 FTSJ1Q9UET6 329 aa5.63□□□□□ -1.51
CLK1-214ENST00000496205 ADAM29Q9UKF5 820 aa5.63□□□□□ -1.51
CLK1-214ENST00000496205 CADPSQ9ULU8 1353 aa5.63□□□□□ -1.51
CLK1-214ENST00000496205 CCDC85CA6NKD9 419 aa5.62□□□□□ -1.51
CLK1-214ENST00000496205 FOXS1O43638 330 aa5.62□□□□□ -1.51
CLK1-214ENST00000496205 CASP7P55210 303 aa5.62□□□□□ -1.51
CLK1-214ENST00000496205 FOXE3Q13461 319 aa5.62□□□□□ -1.51
CLK1-214ENST00000496205 DDR2Q16832 855 aa5.62□□□□□ -1.51
CLK1-214ENST00000496205 PHF19Q5T6S3 580 aa5.62□□□□□ -1.51
CLK1-214ENST00000496205 SOGA3Q5TF21 947 aa5.62□□□□□ -1.51
CLK1-214ENST00000496205 IQCEQ6IPM2 695 aa5.62□□□□□ -1.51
CLK1-214ENST00000496205 POMZP3Q6PJE2 187 aa5.62□□□□□ -1.51
CLK1-214ENST00000496205 RCBTB1Q8NDN9 531 aa5.62□□□□□ -1.51
CLK1-214ENST00000496205 OR6P1Q8NGX9 317 aa5.62□□□□□ -1.51
CLK1-214ENST00000496205 DIO2Q92813 273 aa5.62□□□□□ -1.51
CLK1-214ENST00000496205 TMEM169Q96HH4 297 aa5.62□□□□□ -1.51
CLK1-214ENST00000496205 TMEM209Q96SK2 561 aa5.62□□□□□ -1.51
CLK1-214ENST00000496205 TRIM55Q9BYV6 548 aa5.62□□□□□ -1.51
CLK1-214ENST00000496205 C11orf21Q9P2W6 132 aa5.62□□□□□ -1.51
CLK1-214ENST00000496205 PCDHB4Q9Y5E5 795 aa5.62□□□□□ -1.51
CLK1-214ENST00000496205 MRPL42Q9Y6G3 142 aaKnown RBP5.62□□□□□ -1.51
CLK1-214ENST00000496205 NOP56O00567 594 aaKnown RBP5.61□□□□□ -1.51
CLK1-214ENST00000496205 TBX1O43435 398 aa5.61□□□□□ -1.51
CLK1-214ENST00000496205 CYP7B1O75881 506 aa5.61□□□□□ -1.51
CLK1-214ENST00000496205 GJB6O95452 261 aa5.61□□□□□ -1.51
CLK1-214ENST00000496205 TGFB2P61812 414 aa5.61□□□□□ -1.51
CLK1-214ENST00000496205 TNNI3KQ59H18 835 aa5.61□□□□□ -1.51
CLK1-214ENST00000496205 STEAP3Q658P3 488 aa5.61□□□□□ -1.51
CLK1-214ENST00000496205 LARP1BQ659C4 914 aaKnown RBP5.61□□□□□ -1.51
CLK1-214ENST00000496205 TCTN3Q6NUS6 607 aa5.61□□□□□ -1.51
CLK1-214ENST00000496205 C6orf15Q6UXA7 325 aaPredicted RBP5.61□□□□□ -1.51
CLK1-214ENST00000496205 CRACR2BQ8N4Y2 399 aaPredicted RBP5.61□□□□□ -1.51
CLK1-214ENST00000496205 KREMEN2Q8NCW0 462 aa5.61□□□□□ -1.51
CLK1-214ENST00000496205 BTN2A2Q8WVV5 523 aa5.61□□□□□ -1.51
CLK1-214ENST00000496205 DEPDC7Q96QD5 511 aa5.61□□□□□ -1.51
CLK1-214ENST00000496205 BARX1Q9HBU1 254 aaPredicted RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms