RNA–Protein interactions for RNA: ENST00000496204.1

RAD50-208, Transcript of RAD50 double strand break repair protein, human

TSL 3

Gene RAD50, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD50-208	ENST00000496204	SLC6A20	Q9NP91	592 aa		4.13	□□□□□ -1.75
RAD50-208	ENST00000496204	GPR42	O15529	346 aa		4.12	□□□□□ -1.75
RAD50-208	ENST00000496204	ARID5A	Q03989	594 aa		4.12	□□□□□ -1.75
RAD50-208	ENST00000496204	ICAM4	Q14773	271 aa		4.12	□□□□□ -1.75
RAD50-208	ENST00000496204	HABP4	Q5JVS0	413 aa	Known RBP	4.12	□□□□□ -1.75
RAD50-208	ENST00000496204	CYP4F22	Q6NT55	531 aa		4.12	□□□□□ -1.75
RAD50-208	ENST00000496204	RSPO2	Q6UXX9	243 aa	Predicted RBP	4.12	□□□□□ -1.75
RAD50-208	ENST00000496204	TMC5	Q6UXY8	1006 aa		4.12	□□□□□ -1.75
RAD50-208	ENST00000496204	RBM12B	Q8IXT5	1001 aa	Known RBP	4.12	□□□□□ -1.75
RAD50-208	ENST00000496204	DNER	Q8NFT8	737 aa		4.12	□□□□□ -1.75
RAD50-208	ENST00000496204	TTLL11	Q8NHH1	800 aa		4.12	□□□□□ -1.75
RAD50-208	ENST00000496204	PIP4K2C	Q8TBX8	421 aa		4.12	□□□□□ -1.75
RAD50-208	ENST00000496204	IGDCC4	Q8TDY8	1250 aa		4.12	□□□□□ -1.75
RAD50-208	ENST00000496204	KCTD13	Q8WZ19	329 aa		4.12	□□□□□ -1.75
RAD50-208	ENST00000496204	OSBP2	Q969R2	916 aa		4.12	□□□□□ -1.75
RAD50-208	ENST00000496204	CLIC6	Q96NY7	704 aa		4.12	□□□□□ -1.75
RAD50-208	ENST00000496204	TMEM209	Q96SK2	561 aa		4.12	□□□□□ -1.75
RAD50-208	ENST00000496204	GML	Q99445	158 aa		4.12	□□□□□ -1.75
RAD50-208	ENST00000496204	CD248	Q9HCU0	757 aa		4.12	□□□□□ -1.75
RAD50-208	ENST00000496204	ARHGEF4	Q9NR80	690 aa		4.12	□□□□□ -1.75
RAD50-208	ENST00000496204	ST7	Q9NRC1	585 aa		4.12	□□□□□ -1.75
RAD50-208	ENST00000496204	ST6GALNAC2	Q9UJ37	374 aa		4.12	□□□□□ -1.75
RAD50-208	ENST00000496204	TELO2	Q9Y4R8	837 aa		4.12	□□□□□ -1.75
RAD50-208	ENST00000496204	SLC27A2	O14975	620 aa		4.11	□□□□□ -1.75
RAD50-208	ENST00000496204	LAMTOR5	O43504	91 aa		4.11	□□□□□ -1.75
RAD50-208	ENST00000496204	KLHL18	O94889	574 aa		4.11	□□□□□ -1.75
RAD50-208	ENST00000496204	EPHB4	P54760	987 aa		4.11	□□□□□ -1.75
RAD50-208	ENST00000496204	DDR2	Q16832	855 aa		4.11	□□□□□ -1.75
RAD50-208	ENST00000496204	KCNT2	Q6UVM3	1135 aa		4.11	□□□□□ -1.75
RAD50-208	ENST00000496204	LBX2	Q6XYB7	198 aa		4.11	□□□□□ -1.75
RAD50-208	ENST00000496204	OTOP3	Q7RTS5	596 aa		4.11	□□□□□ -1.75
RAD50-208	ENST00000496204	DTX3	Q8N9I9	347 aa		4.11	□□□□□ -1.75
RAD50-208	ENST00000496204	ZNF428	Q96B54	188 aa		4.11	□□□□□ -1.75
RAD50-208	ENST00000496204	SGSM3	Q96HU1	749 aa		4.11	□□□□□ -1.75
RAD50-208	ENST00000496204	WWC2-AS2	Q96NR7	200 aa		4.11	□□□□□ -1.75
RAD50-208	ENST00000496204	PTPN18	Q99952	460 aa		4.11	□□□□□ -1.75
RAD50-208	ENST00000496204	PHF20	Q9BVI0	1012 aa		4.11	□□□□□ -1.75
RAD50-208	ENST00000496204	TMEM168	Q9H0V1	697 aa		4.11	□□□□□ -1.75
RAD50-208	ENST00000496204	L2HGDH	Q9H9P8	463 aa		4.11	□□□□□ -1.75
RAD50-208	ENST00000496204	CROT	Q9UKG9	612 aa		4.11	□□□□□ -1.75
RAD50-208	ENST00000496204	AKAP8	O43823	692 aa	Known RBP	4.1	□□□□□ -1.75
RAD50-208	ENST00000496204	LTF	P02788	710 aa		4.1	□□□□□ -1.75
RAD50-208	ENST00000496204	CYP1A1	P04798	512 aa	Predicted RBP	4.1	□□□□□ -1.75
RAD50-208	ENST00000496204	FGFR1	P11362	822 aa		4.1	□□□□□ -1.75
RAD50-208	ENST00000496204	PPP2CB	P62714	309 aa		4.1	□□□□□ -1.75
RAD50-208	ENST00000496204	PPP2CA	P67775	309 aa		4.1	□□□□□ -1.75
RAD50-208	ENST00000496204	ZXDA	P98168	799 aa		4.1	□□□□□ -1.75
RAD50-208	ENST00000496204	GNL2	Q13823	731 aa	Known RBP	4.1	□□□□□ -1.75
RAD50-208	ENST00000496204	SURF1	Q15526	300 aa		4.1	□□□□□ -1.75
RAD50-208	ENST00000496204	PHF19	Q5T6S3	580 aa		4.1	□□□□□ -1.75
RAD50-208	ENST00000496204	YOD1	Q5VVQ6	348 aa	Predicted RBP	4.1	□□□□□ -1.75
RAD50-208	ENST00000496204	GLB1L	Q6UWU2	654 aa		4.1	□□□□□ -1.75
RAD50-208	ENST00000496204	ANKS3	Q6ZW76	656 aa		4.1	□□□□□ -1.75
RAD50-208	ENST00000496204	USP53	Q70EK8	1073 aa		4.1	□□□□□ -1.75
RAD50-208	ENST00000496204	KBTBD2	Q8IY47	623 aa		4.1	□□□□□ -1.75
RAD50-208	ENST00000496204	SLC43A3	Q8NBI5	491 aa		4.1	□□□□□ -1.75
RAD50-208	ENST00000496204	NUDT10	Q8NFP7	164 aa		4.1	□□□□□ -1.75
RAD50-208	ENST00000496204	UHMK1	Q8TAS1	419 aa	Known RBP	4.1	□□□□□ -1.75
RAD50-208	ENST00000496204	DVL3	Q92997	716 aa	Predicted RBP	4.1	□□□□□ -1.75
RAD50-208	ENST00000496204	NUDT11	Q96G61	164 aa		4.1	□□□□□ -1.75
RAD50-208	ENST00000496204	ZNF536	O15090	1300 aa		4.1	□□□□□ -1.75
RAD50-208	ENST00000496204	BLACE	A4D250	179 aa		4.09	□□□□□ -1.75
RAD50-208	ENST00000496204	AGRP	O00253	132 aa		4.09	□□□□□ -1.75
RAD50-208	ENST00000496204	KRIT1	O00522	736 aa		4.09	□□□□□ -1.75
RAD50-208	ENST00000496204	NKRF	O15226	690 aa	Known RBP eCLIP	4.09	□□□□□ -1.75
RAD50-208	ENST00000496204	PRODH	O43272	600 aa		4.09	□□□□□ -1.75
RAD50-208	ENST00000496204	MAFK	O60675	156 aa		4.09	□□□□□ -1.75
RAD50-208	ENST00000496204	CYP7B1	O75881	506 aa		4.09	□□□□□ -1.75
RAD50-208	ENST00000496204	CKM	P06732	381 aa		4.09	□□□□□ -1.75
RAD50-208	ENST00000496204	COL6A2	P12110	1019 aa		4.09	□□□□□ -1.75
RAD50-208	ENST00000496204	FAH	P16930	419 aa		4.09	□□□□□ -1.75
RAD50-208	ENST00000496204	GRIN1	Q05586	938 aa		4.09	□□□□□ -1.75
RAD50-208	ENST00000496204	NFATC3	Q12968	1075 aa		4.09	□□□□□ -1.75
RAD50-208	ENST00000496204	TUSC3	Q13454	348 aa		4.09	□□□□□ -1.75
RAD50-208	ENST00000496204	HSP90AA2P	Q14568	343 aa	Predicted RBP	4.09	□□□□□ -1.75
RAD50-208	ENST00000496204	STYK1	Q6J9G0	422 aa		4.09	□□□□□ -1.75
RAD50-208	ENST00000496204	TRMT10B	Q6PF06	316 aa	Known RBP	4.09	□□□□□ -1.75
RAD50-208	ENST00000496204	TRIM48	Q8IWZ4	208 aa		4.09	□□□□□ -1.75
RAD50-208	ENST00000496204	KLHL36	Q8N4N3	616 aa		4.09	□□□□□ -1.75
RAD50-208	ENST00000496204	DCAF4	Q8WV16	495 aa		4.09	□□□□□ -1.75
RAD50-208	ENST00000496204	AARSD1	Q9BTE6	412 aa	Known RBP	4.09	□□□□□ -1.75
RAD50-208	ENST00000496204	MEGF9	Q9H1U4	602 aa		4.09	□□□□□ -1.75
RAD50-208	ENST00000496204	ADAM29	Q9UKF5	820 aa		4.09	□□□□□ -1.75
RAD50-208	ENST00000496204	ASXL2	Q76L83	1435 aa		4.09	□□□□□ -1.75
RAD50-208	ENST00000496204	PATE3	B3GLJ2	98 aa		4.08	□□□□□ -1.76
RAD50-208	ENST00000496204	ACOT7	O00154	380 aa		4.08	□□□□□ -1.76
RAD50-208	ENST00000496204	B4GALT4	O60513	344 aa		4.08	□□□□□ -1.76
RAD50-208	ENST00000496204	KNG1	P01042	644 aa		4.08	□□□□□ -1.76
RAD50-208	ENST00000496204	PABPC1	P11940	636 aa	Known RBP	4.08	□□□□□ -1.76
RAD50-208	ENST00000496204	GRK2	P25098	689 aa		4.08	□□□□□ -1.76
RAD50-208	ENST00000496204	DNAJA1	P31689	397 aa	Known RBP	4.08	□□□□□ -1.76
RAD50-208	ENST00000496204	GRK3	P35626	688 aa		4.08	□□□□□ -1.76
RAD50-208	ENST00000496204	EPHA5	P54756	1037 aa		4.08	□□□□□ -1.76
RAD50-208	ENST00000496204	GPR85	P60893	370 aa		4.08	□□□□□ -1.76
RAD50-208	ENST00000496204	R3HDM1	Q15032	1099 aa	Known RBP	4.08	□□□□□ -1.76
RAD50-208	ENST00000496204	PAN2	Q504Q3	1202 aa	Known RBP	4.08	□□□□□ -1.76
RAD50-208	ENST00000496204	SPRED1	Q7Z699	444 aa		4.08	□□□□□ -1.76
RAD50-208	ENST00000496204	PLEKHH3	Q7Z736	793 aa		4.08	□□□□□ -1.76
RAD50-208	ENST00000496204		Q8N1X5	172 aa		4.08	□□□□□ -1.76
RAD50-208	ENST00000496204	CHST13	Q8NET6	341 aa		4.08	□□□□□ -1.76

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