RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.27■□□□□ 0.04
PTPN7-218ENST00000496197 POLR3EQ9NVU0 708 aa15.27■□□□□ 0.04
PTPN7-218ENST00000496197 FAM184BQ9ULE4 1060 aa15.27■□□□□ 0.04
PTPN7-218ENST00000496197 MYADML2A6NDP7 307 aa15.27■□□□□ 0.03
PTPN7-218ENST00000496197 CTAGE5O15320 804 aa15.27■□□□□ 0.03
PTPN7-218ENST00000496197 MAFGO15525 162 aa15.27■□□□□ 0.03
PTPN7-218ENST00000496197 CCNE2O96020 404 aa15.27■□□□□ 0.03
PTPN7-218ENST00000496197 OR52Z1P0C646 297 aa15.27■□□□□ 0.03
PTPN7-218ENST00000496197 TGFB3P10600 412 aa15.27■□□□□ 0.03
PTPN7-218ENST00000496197 CCL5P13501 91 aa15.27■□□□□ 0.03
PTPN7-218ENST00000496197 SPIRE1Q08AE8 756 aa15.27■□□□□ 0.03
PTPN7-218ENST00000496197 ORC2Q13416 577 aaPredicted RBP15.27■□□□□ 0.03
PTPN7-218ENST00000496197 HSDL1Q3SXM5 330 aa15.27■□□□□ 0.03
PTPN7-218ENST00000496197 CELF3Q5SZQ8 465 aaKnown RBP15.27■□□□□ 0.03
PTPN7-218ENST00000496197 B3GNT9Q6UX72 402 aa15.27■□□□□ 0.03
PTPN7-218ENST00000496197 LINC00301Q8NCQ3 95 aa15.27■□□□□ 0.03
PTPN7-218ENST00000496197 CDHR1Q96JP9 859 aa15.27■□□□□ 0.03
PTPN7-218ENST00000496197 SENP7Q9BQF6 1050 aa15.27■□□□□ 0.03
PTPN7-218ENST00000496197 GDPD2Q9HCC8 539 aa15.27■□□□□ 0.03
PTPN7-218ENST00000496197 HMX1Q9NP08 348 aaPredicted RBP15.27■□□□□ 0.03
PTPN7-218ENST00000496197 PAK6Q9NQU5 681 aaPredicted RBP15.27■□□□□ 0.03
PTPN7-218ENST00000496197 VAV3Q9UKW4 847 aa15.27■□□□□ 0.03
PTPN7-218ENST00000496197 MARCKSP29966 332 aaPredicted RBP15.26■□□□□ 0.03
PTPN7-218ENST00000496197 TXKP42681 527 aa15.26■□□□□ 0.03
PTPN7-218ENST00000496197 SP4Q02446 784 aa15.26■□□□□ 0.03
PTPN7-218ENST00000496197 LRCH2Q5VUJ6 765 aa15.26■□□□□ 0.03
PTPN7-218ENST00000496197 TLK2Q86UE8 772 aa15.26■□□□□ 0.03
PTPN7-218ENST00000496197 ZNF396Q96N95 335 aaPredicted RBP15.26■□□□□ 0.03
PTPN7-218ENST00000496197 UNC45AQ9H3U1 944 aa15.26■□□□□ 0.03
PTPN7-218ENST00000496197 DDX20Q9UHI6 824 aaKnown RBP15.26■□□□□ 0.03
PTPN7-218ENST00000496197 NFASCO94856 1347 aa15.26■□□□□ 0.03
PTPN7-218ENST00000496197 SYNRGQ9UMZ2 1314 aa15.26■□□□□ 0.03
PTPN7-218ENST00000496197 POTEMA6NI47 508 aa15.25■□□□□ 0.03
PTPN7-218ENST00000496197 EML1O00423 815 aa15.25■□□□□ 0.03
PTPN7-218ENST00000496197 TBX3O15119 743 aa15.25■□□□□ 0.03
PTPN7-218ENST00000496197 DYNC1LI2O43237 492 aaPredicted RBP15.25■□□□□ 0.03
PTPN7-218ENST00000496197 PGK1P00558 417 aa15.25■□□□□ 0.03
PTPN7-218ENST00000496197 SLC39A14Q15043 492 aa15.25■□□□□ 0.03
PTPN7-218ENST00000496197 KCNV1Q6PIU1 500 aa15.25■□□□□ 0.03
PTPN7-218ENST00000496197 OR6J1Q8NGC5 347 aa15.25■□□□□ 0.03
PTPN7-218ENST00000496197 FAM20AQ96MK3 541 aa15.25■□□□□ 0.03
PTPN7-218ENST00000496197 TTC12Q9H892 705 aaPredicted RBP15.25■□□□□ 0.03
PTPN7-218ENST00000496197 MYH9P35579 1960 aaKnown RBP15.25■□□□□ 0.03
PTPN7-218ENST00000496197 CHMP2AO43633 222 aa15.24■□□□□ 0.03
PTPN7-218ENST00000496197 GAS7O60861 476 aa15.24■□□□□ 0.03
PTPN7-218ENST00000496197 ADAMTS4O75173 837 aa15.24■□□□□ 0.03
PTPN7-218ENST00000496197 DUSP11O75319 330 aaKnown RBP15.24■□□□□ 0.03
PTPN7-218ENST00000496197 GH1P01241 217 aa15.24■□□□□ 0.03
PTPN7-218ENST00000496197 NCLP19338 710 aaKnown RBP15.24■□□□□ 0.03
PTPN7-218ENST00000496197 TECP42680 631 aa15.24■□□□□ 0.03
PTPN7-218ENST00000496197 BEX3Q00994 111 aa15.24■□□□□ 0.03
PTPN7-218ENST00000496197 NEDD9Q14511 834 aa15.24■□□□□ 0.03
PTPN7-218ENST00000496197 METTL7BQ6UX53 244 aa15.24■□□□□ 0.03
PTPN7-218ENST00000496197 DHX37Q8IY37 1157 aaKnown RBP15.24■□□□□ 0.03
PTPN7-218ENST00000496197 AFG1LQ8WV93 481 aa15.24■□□□□ 0.03
PTPN7-218ENST00000496197 RIT2Q99578 217 aa15.24■□□□□ 0.03
PTPN7-218ENST00000496197 RNF208Q9H0X6 261 aa15.24■□□□□ 0.03
PTPN7-218ENST00000496197 JPH1Q9HDC5 661 aaPredicted RBP15.24■□□□□ 0.03
PTPN7-218ENST00000496197 SLC9A2Q9UBY0 812 aa15.24■□□□□ 0.03
PTPN7-218ENST00000496197 FBXO2Q9UK22 296 aaPredicted RBP15.24■□□□□ 0.03
PTPN7-218ENST00000496197 GSTTP1A0A1W2PQM5 241 aa15.23■□□□□ 0.03
PTPN7-218ENST00000496197 PP2D1A8MPX8 630 aa15.23■□□□□ 0.03
PTPN7-218ENST00000496197 NKRFO15226 690 aaKnown RBP eCLIP15.23■□□□□ 0.03
PTPN7-218ENST00000496197 YEATS4O95619 227 aa15.23■□□□□ 0.03
PTPN7-218ENST00000496197 RARBP10826 455 aa15.23■□□□□ 0.03
PTPN7-218ENST00000496197 PRPHP41219 470 aa15.23■□□□□ 0.03
PTPN7-218ENST00000496197 KRT85P78386 507 aa15.23■□□□□ 0.03
PTPN7-218ENST00000496197 SLFN12Q8IYM2 578 aa15.23■□□□□ 0.03
PTPN7-218ENST00000496197 LEO1Q8WVC0 666 aaPredicted RBP15.23■□□□□ 0.03
PTPN7-218ENST00000496197 EMID1Q96A84 441 aaPredicted RBP15.23■□□□□ 0.03
PTPN7-218ENST00000496197 SPATA33Q96N06 139 aa15.23■□□□□ 0.03
PTPN7-218ENST00000496197 CLIC6Q96NY7 704 aa15.23■□□□□ 0.03
PTPN7-218ENST00000496197 DEFB118Q96PH6 123 aa15.23■□□□□ 0.03
PTPN7-218ENST00000496197 GPR20Q99678 358 aa15.23■□□□□ 0.03
PTPN7-218ENST00000496197 SDF4Q9BRK5 362 aa15.23■□□□□ 0.03
PTPN7-218ENST00000496197 TEKT3Q9BXF9 490 aa15.23■□□□□ 0.03
PTPN7-218ENST00000496197 UPF3AQ9H1J1 476 aaKnown RBP15.23■□□□□ 0.03
PTPN7-218ENST00000496197 MLXIPQ9HAP2 919 aa15.23■□□□□ 0.03
PTPN7-218ENST00000496197 XPNPEP3Q9NQH7 507 aa15.23■□□□□ 0.03
PTPN7-218ENST00000496197 TBC1D22BQ9NU19 505 aa15.23■□□□□ 0.03
PTPN7-218ENST00000496197 PCDHA12Q9UN75 941 aa15.23■□□□□ 0.03
PTPN7-218ENST00000496197 ARID2Q68CP9 1835 aa15.22■□□□□ 0.03
PTPN7-218ENST00000496197 VWA3AA6NCI4 1184 aa15.22■□□□□ 0.03
PTPN7-218ENST00000496197 LAD1O00515 517 aa15.22■□□□□ 0.03
PTPN7-218ENST00000496197 SPTLC2O15270 562 aa15.22■□□□□ 0.03
PTPN7-218ENST00000496197 MMP3P08254 477 aa15.22■□□□□ 0.03
PTPN7-218ENST00000496197 GJA9P57773 515 aa15.22■□□□□ 0.03
PTPN7-218ENST00000496197 ACTR2P61160 394 aa15.22■□□□□ 0.03
PTPN7-218ENST00000496197 PPP2R5CQ13362 524 aa15.22■□□□□ 0.03
PTPN7-218ENST00000496197 STK38Q15208 465 aa15.22■□□□□ 0.03
PTPN7-218ENST00000496197 ATL3Q6DD88 541 aa15.22■□□□□ 0.03
PTPN7-218ENST00000496197 PCYT2Q99447 389 aa15.22■□□□□ 0.03
PTPN7-218ENST00000496197 RCOR1Q9UKL0 485 aa15.22■□□□□ 0.03
PTPN7-218ENST00000496197 Q9Y3F1 56 aa15.22■□□□□ 0.03
PTPN7-218ENST00000496197 ATP6V1DQ9Y5K8 247 aa15.22■□□□□ 0.03
PTPN7-218ENST00000496197 MARCH6O60337 910 aa15.21■□□□□ 0.03
PTPN7-218ENST00000496197 ATG7O95352 703 aa15.21■□□□□ 0.03
PTPN7-218ENST00000496197 BAG4O95429 457 aaKnown RBP15.21■□□□□ 0.03
PTPN7-218ENST00000496197 C6orf222P0C671 652 aaPredicted RBP15.21■□□□□ 0.03
PTPN7-218ENST00000496197 CDC25AP30304 524 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms