RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, human

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-223	ENST00000496024	KPNA6	O60684	536 aa		11.18	□□□□□ -0.62
CALD1-223	ENST00000496024	CYP3A4	P08684	503 aa		11.18	□□□□□ -0.62
CALD1-223	ENST00000496024	KCNA2	P16389	499 aa		11.18	□□□□□ -0.62
CALD1-223	ENST00000496024	INF2	Q27J81	1249 aa		11.18	□□□□□ -0.62
CALD1-223	ENST00000496024	NBPF20	Q3BBV1	942 aa		11.18	□□□□□ -0.62
CALD1-223	ENST00000496024	PRR16	Q569H4	304 aa		11.18	□□□□□ -0.62
CALD1-223	ENST00000496024	UTP14C	Q5TAP6	766 aa	Known RBP	11.18	□□□□□ -0.62
CALD1-223	ENST00000496024	PRPF38B	Q5VTL8	546 aa	Known RBP	11.18	□□□□□ -0.62
CALD1-223	ENST00000496024	GALNT17	Q6IS24	598 aa		11.18	□□□□□ -0.62
CALD1-223	ENST00000496024	METTL7B	Q6UX53	244 aa		11.18	□□□□□ -0.62
CALD1-223	ENST00000496024	SH3RF1	Q7Z6J0	888 aa		11.18	□□□□□ -0.62
CALD1-223	ENST00000496024	FAM184A	Q8NB25	1140 aa		11.18	□□□□□ -0.62
CALD1-223	ENST00000496024	SENP7	Q9BQF6	1050 aa		11.18	□□□□□ -0.62
CALD1-223	ENST00000496024	PRKAG2	Q9UGJ0	569 aa		11.18	□□□□□ -0.62
CALD1-223	ENST00000496024	FAM205C	A6NFA0	338 aa		11.17	□□□□□ -0.62
CALD1-223	ENST00000496024		M0R2N6	131 aa		11.17	□□□□□ -0.62
CALD1-223	ENST00000496024	TLR3	O15455	904 aa	Known RBP	11.17	□□□□□ -0.62
CALD1-223	ENST00000496024	MAFG	O15525	162 aa		11.17	□□□□□ -0.62
CALD1-223	ENST00000496024	CLTB	P09497	229 aa		11.17	□□□□□ -0.62
CALD1-223	ENST00000496024	KRT2	P35908	639 aa		11.17	□□□□□ -0.62
CALD1-223	ENST00000496024	MCM2	P49736	904 aa		11.17	□□□□□ -0.62
CALD1-223	ENST00000496024	PSEN2	P49810	448 aa		11.17	□□□□□ -0.62
CALD1-223	ENST00000496024	CDK7	P50613	346 aa		11.17	□□□□□ -0.62
CALD1-223	ENST00000496024	HMGN5	P82970	282 aa	Known RBP	11.17	□□□□□ -0.62
CALD1-223	ENST00000496024	NR5A1	Q13285	461 aa		11.17	□□□□□ -0.62
CALD1-223	ENST00000496024	NONO	Q15233	471 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
CALD1-223	ENST00000496024	C1orf53	Q5VUE5	145 aa		11.17	□□□□□ -0.62
CALD1-223	ENST00000496024	KRT40	Q6A162	431 aa		11.17	□□□□□ -0.62
CALD1-223	ENST00000496024	PIK3AP1	Q6ZUJ8	805 aa		11.17	□□□□□ -0.62
CALD1-223	ENST00000496024	KRT25	Q7Z3Z0	450 aa		11.17	□□□□□ -0.62
CALD1-223	ENST00000496024	TRIM50	Q86XT4	487 aa		11.17	□□□□□ -0.62
CALD1-223	ENST00000496024	FAM177A1	Q8N128	213 aa	Predicted RBP	11.17	□□□□□ -0.62
CALD1-223	ENST00000496024	GIMAP8	Q8ND71	665 aa	Predicted RBP	11.17	□□□□□ -0.62
CALD1-223	ENST00000496024	CRYGN	Q8WXF5	182 aa		11.17	□□□□□ -0.62
CALD1-223	ENST00000496024	KAT2B	Q92831	832 aa		11.17	□□□□□ -0.62
CALD1-223	ENST00000496024	C8orf76	Q96K31	380 aa		11.17	□□□□□ -0.62
CALD1-223	ENST00000496024	GPR20	Q99678	358 aa		11.17	□□□□□ -0.62
CALD1-223	ENST00000496024	SDF4	Q9BRK5	362 aa		11.17	□□□□□ -0.62
CALD1-223	ENST00000496024	TRPV6	Q9H1D0	765 aa		11.17	□□□□□ -0.62
CALD1-223	ENST00000496024	AGO4	Q9HCK5	861 aa	Known RBP	11.17	□□□□□ -0.62
CALD1-223	ENST00000496024	BRMS1	Q9HCU9	246 aa		11.17	□□□□□ -0.62
CALD1-223	ENST00000496024	PDLIM7	Q9NR12	457 aa		11.17	□□□□□ -0.62
CALD1-223	ENST00000496024	TMEM39A	Q9NV64	488 aa		11.17	□□□□□ -0.62
CALD1-223	ENST00000496024	TRIP12	Q14669	1992 aa	Predicted RBP	11.17	□□□□□ -0.62
CALD1-223	ENST00000496024	MROH7	Q68CQ1	1323 aa		11.16	□□□□□ -0.62
CALD1-223	ENST00000496024	TRIOBP	Q9H2D6	2365 aa		11.16	□□□□□ -0.62
CALD1-223	ENST00000496024	IGLV3-22	A0A075B6J6	115 aa		11.16	□□□□□ -0.62
CALD1-223	ENST00000496024	TRIM43B	A6NCK2	446 aa		11.16	□□□□□ -0.62
CALD1-223	ENST00000496024	BTBD18	B2RXH4	712 aa		11.16	□□□□□ -0.62
CALD1-223	ENST00000496024	EDIL3	O43854	480 aa		11.16	□□□□□ -0.62
CALD1-223	ENST00000496024	PPFIA4	O75335	1185 aa		11.16	□□□□□ -0.62
CALD1-223	ENST00000496024	TDP2	O95551	362 aa		11.16	□□□□□ -0.62
CALD1-223	ENST00000496024	MMP1	P03956	469 aa		11.16	□□□□□ -0.62
CALD1-223	ENST00000496024	LGALS2	P05162	132 aa		11.16	□□□□□ -0.62
CALD1-223	ENST00000496024	MDM2	Q00987	491 aa	Predicted RBP	11.16	□□□□□ -0.62
CALD1-223	ENST00000496024	FAAP100	Q0VG06	881 aa		11.16	□□□□□ -0.62
CALD1-223	ENST00000496024	ITGB3BP	Q13352	177 aa	Predicted RBP	11.16	□□□□□ -0.62
CALD1-223	ENST00000496024	MFSD10	Q14728	455 aa		11.16	□□□□□ -0.62
CALD1-223	ENST00000496024	KIAA0753	Q2KHM9	967 aa		11.16	□□□□□ -0.62
CALD1-223	ENST00000496024	LETM2	Q2VYF4	491 aa		11.16	□□□□□ -0.62
CALD1-223	ENST00000496024	NIPA1	Q7RTP0	329 aa		11.16	□□□□□ -0.62
CALD1-223	ENST00000496024	ANKRD33	Q7Z3H0	272 aa		11.16	□□□□□ -0.62
CALD1-223	ENST00000496024	DIS3L2	Q8IYB7	885 aa	Known RBP	11.16	□□□□□ -0.62
CALD1-223	ENST00000496024	SLC43A3	Q8NBI5	491 aa		11.16	□□□□□ -0.62
CALD1-223	ENST00000496024	TRIM43	Q96BQ3	446 aa	Predicted RBP	11.16	□□□□□ -0.62
CALD1-223	ENST00000496024	ZNF577	Q9BSK1	485 aa		11.16	□□□□□ -0.62
CALD1-223	ENST00000496024	JPH1	Q9HDC5	661 aa	Predicted RBP	11.16	□□□□□ -0.62
CALD1-223	ENST00000496024	TRMT13	Q9NUP7	481 aa	Known RBP	11.16	□□□□□ -0.62
CALD1-223	ENST00000496024	SLC9A2	Q9UBY0	812 aa		11.16	□□□□□ -0.62
CALD1-223	ENST00000496024	KAT6A	Q92794	2004 aa		11.16	□□□□□ -0.62
CALD1-223	ENST00000496024	GSTTP1	A0A1W2PQM5	241 aa		11.15	□□□□□ -0.62
CALD1-223	ENST00000496024		H3BRB1	525 aa		11.15	□□□□□ -0.62
CALD1-223	ENST00000496024	IPO5	O00410	1097 aa	Known RBP	11.15	□□□□□ -0.62
CALD1-223	ENST00000496024	B4GALT4	O60513	344 aa		11.15	□□□□□ -0.62
CALD1-223	ENST00000496024	CIITA	P33076	1130 aa		11.15	□□□□□ -0.62
CALD1-223	ENST00000496024	TCF7	P36402	384 aa	Predicted RBP	11.15	□□□□□ -0.62
CALD1-223	ENST00000496024	MAGEA10	P43363	369 aa	Predicted RBP	11.15	□□□□□ -0.62
CALD1-223	ENST00000496024	USP11	P51784	963 aa		11.15	□□□□□ -0.62
CALD1-223	ENST00000496024	SET	Q01105	290 aa	Predicted RBP	11.15	□□□□□ -0.62
CALD1-223	ENST00000496024	SAFB	Q15424	915 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
CALD1-223	ENST00000496024	EARS2	Q5JPH6	523 aa	Known RBP	11.15	□□□□□ -0.62
CALD1-223	ENST00000496024	CHRDL2	Q6WN34	429 aa		11.15	□□□□□ -0.62
CALD1-223	ENST00000496024	FAM126B	Q8IXS8	530 aa		11.15	□□□□□ -0.62
CALD1-223	ENST00000496024	IL27	Q8NEV9	243 aa		11.15	□□□□□ -0.62
CALD1-223	ENST00000496024	SEPT1	Q8WYJ6	367 aa		11.15	□□□□□ -0.62
CALD1-223	ENST00000496024	GJA10	Q969M2	543 aa		11.15	□□□□□ -0.62
CALD1-223	ENST00000496024	TOX2	Q96NM4	488 aa		11.15	□□□□□ -0.62
CALD1-223	ENST00000496024	LBHD1	Q9BQE6	289 aa	Predicted RBP	11.15	□□□□□ -0.62
CALD1-223	ENST00000496024	C16orf70	Q9BSU1	422 aa		11.15	□□□□□ -0.62
CALD1-223	ENST00000496024	KATNAL1	Q9BW62	490 aa		11.15	□□□□□ -0.62
CALD1-223	ENST00000496024	PPP1R12C	Q9BZL4	782 aa		11.15	□□□□□ -0.62
CALD1-223	ENST00000496024	TUT1	Q9H6E5	874 aa	Known RBP	11.15	□□□□□ -0.62
CALD1-223	ENST00000496024	HDAC6	Q9UBN7	1215 aa		11.15	□□□□□ -0.62
CALD1-223	ENST00000496024	NOD1	Q9Y239	953 aa		11.15	□□□□□ -0.62
CALD1-223	ENST00000496024	NFASC	O94856	1347 aa		11.14	□□□□□ -0.63
CALD1-223	ENST00000496024	MSH4	O15457	936 aa		11.14	□□□□□ -0.63
CALD1-223	ENST00000496024	F2	P00734	622 aa		11.14	□□□□□ -0.63
CALD1-223	ENST00000496024	CD4	P01730	458 aa		11.14	□□□□□ -0.63
CALD1-223	ENST00000496024	CYP2C9	P11712	490 aa		11.14	□□□□□ -0.63
CALD1-223	ENST00000496024	HOXD8	P13378	290 aa	Predicted RBP	11.14	□□□□□ -0.63

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