RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 SLC4A7Q9Y6M7 1214 aa27.79■■■□□ 2.04
HLA-C-209ENST00000495835 RPS6KB1P23443 525 aa27.78■■■□□ 2.04
HLA-C-209ENST00000495835 CDC27P30260 824 aa27.78■■■□□ 2.04
HLA-C-209ENST00000495835 NAPAP54920 295 aa27.78■■■□□ 2.04
HLA-C-209ENST00000495835 GPR20Q99678 358 aa27.78■■■□□ 2.04
HLA-C-209ENST00000495835 PBX4Q9BYU1 374 aa27.78■■■□□ 2.04
HLA-C-209ENST00000495835 MSRAQ9UJ68 235 aa27.78■■■□□ 2.04
HLA-C-209ENST00000495835 UBIAD1Q9Y5Z9 338 aa27.78■■■□□ 2.04
HLA-C-209ENST00000495835 SCN5AQ14524 2016 aa27.78■■■□□ 2.04
HLA-C-209ENST00000495835 CDH23Q9H251 3354 aa27.77■■■□□ 2.04
HLA-C-209ENST00000495835 SELPP16109 830 aa27.77■■■□□ 2.04
HLA-C-209ENST00000495835 UBE2SQ16763 222 aa27.77■■■□□ 2.04
HLA-C-209ENST00000495835 BRF1Q92994 677 aa27.77■■■□□ 2.04
HLA-C-209ENST00000495835 LGALS2P05162 132 aa27.76■■■□□ 2.03
HLA-C-209ENST00000495835 EVCP57679 992 aa27.76■■■□□ 2.03
HLA-C-209ENST00000495835 APOBRQ0VD83 1088 aa27.76■■■□□ 2.03
HLA-C-209ENST00000495835 DEFB128Q7Z7B8 93 aa27.76■■■□□ 2.03
HLA-C-209ENST00000495835 ZNF576Q9H609 170 aa27.76■■■□□ 2.03
HLA-C-209ENST00000495835 BCAS3Q9H6U6 928 aa27.76■■■□□ 2.03
HLA-C-209ENST00000495835 STXBP3O00186 592 aa27.75■■■□□ 2.03
HLA-C-209ENST00000495835 SORBS3O60504 671 aa27.75■■■□□ 2.03
HLA-C-209ENST00000495835 CPA1P15085 419 aa27.75■■■□□ 2.03
HLA-C-209ENST00000495835 ITGB5P18084 799 aa27.75■■■□□ 2.03
HLA-C-209ENST00000495835 HOXC8P31273 242 aa27.75■■■□□ 2.03
HLA-C-209ENST00000495835 ADD1P35611 737 aaKnown RBP27.75■■■□□ 2.03
HLA-C-209ENST00000495835 ADCY7P51828 1080 aa27.75■■■□□ 2.03
HLA-C-209ENST00000495835 AP3B2Q13367 1082 aa27.75■■■□□ 2.03
HLA-C-209ENST00000495835 MCTP2Q6DN12 878 aa27.75■■■□□ 2.03
HLA-C-209ENST00000495835 DHX38Q92620 1227 aaKnown RBP27.75■■■□□ 2.03
HLA-C-209ENST00000495835 JADE2Q9NQC1 790 aa27.75■■■□□ 2.03
HLA-C-209ENST00000495835 ZNF215Q9UL58 517 aaPredicted RBP27.75■■■□□ 2.03
HLA-C-209ENST00000495835 NAP1L2Q9ULW6 460 aaPredicted RBP27.75■■■□□ 2.03
HLA-C-209ENST00000495835 DOCK5Q9H7D0 1870 aa27.74■■■□□ 2.03
HLA-C-209ENST00000495835 SMCO2A6NFE2 343 aa27.74■■■□□ 2.03
HLA-C-209ENST00000495835 GRXCR1A8MXD5 290 aa27.74■■■□□ 2.03
HLA-C-209ENST00000495835 BAIAP3O94812 1187 aa27.74■■■□□ 2.03
HLA-C-209ENST00000495835 CKBP12277 381 aa27.74■■■□□ 2.03
HLA-C-209ENST00000495835 MTMR1Q13613 665 aa27.74■■■□□ 2.03
HLA-C-209ENST00000495835 PFKFB3Q16875 520 aaPredicted RBP27.74■■■□□ 2.03
HLA-C-209ENST00000495835 TYW1BQ6NUM6 668 aa27.74■■■□□ 2.03
HLA-C-209ENST00000495835 LRRC8DQ7L1W4 858 aa27.74■■■□□ 2.03
HLA-C-209ENST00000495835 SLC17A8Q8NDX2 589 aa27.74■■■□□ 2.03
HLA-C-209ENST00000495835 PHOSPHO2Q8TCD6 241 aa27.74■■■□□ 2.03
HLA-C-209ENST00000495835 C17orf102A2RUQ5 167 aa27.73■■■□□ 2.03
HLA-C-209ENST00000495835 ZBBXA8MT70 800 aa27.73■■■□□ 2.03
HLA-C-209ENST00000495835 GNAT1P11488 350 aa27.73■■■□□ 2.03
HLA-C-209ENST00000495835 KCNA2P16389 499 aa27.73■■■□□ 2.03
HLA-C-209ENST00000495835 RUFY3Q7L099 469 aa27.73■■■□□ 2.03
HLA-C-209ENST00000495835 SERINC5Q86VE9 423 aa27.73■■■□□ 2.03
HLA-C-209ENST00000495835 CCDC12Q8WUD4 166 aaPredicted RBP27.73■■■□□ 2.03
HLA-C-209ENST00000495835 TM6SF1Q9BZW5 370 aa27.73■■■□□ 2.03
HLA-C-209ENST00000495835 FTOQ9C0B1 505 aaKnown RBP eCLIP27.73■■■□□ 2.03
HLA-C-209ENST00000495835 ZSWIM6Q9HCJ5 1215 aa27.73■■■□□ 2.03
HLA-C-209ENST00000495835 PCDHA11Q9Y5I1 949 aa27.73■■■□□ 2.03
HLA-C-209ENST00000495835 PRPF3O43395 683 aaKnown RBP27.72■■■□□ 2.03
HLA-C-209ENST00000495835 CXCL10P02778 98 aa27.72■■■□□ 2.03
HLA-C-209ENST00000495835 SCG2P13521 617 aa27.72■■■□□ 2.03
HLA-C-209ENST00000495835 PBX2P40425 430 aa27.72■■■□□ 2.03
HLA-C-209ENST00000495835 CLK2P49760 499 aaKnown RBP27.72■■■□□ 2.03
HLA-C-209ENST00000495835 TRIM71Q2Q1W2 868 aaKnown RBP27.72■■■□□ 2.03
HLA-C-209ENST00000495835 SLC9A7Q96T83 725 aa27.72■■■□□ 2.03
HLA-C-209ENST00000495835 MXRA8Q9BRK3 442 aa27.72■■■□□ 2.03
HLA-C-209ENST00000495835 CHD9Q3L8U1 2897 aa27.71■■■□□ 2.03
HLA-C-209ENST00000495835 ESYT2A0FGR8 921 aa27.71■■■□□ 2.03
HLA-C-209ENST00000495835 ATP9AO75110 1047 aa27.71■■■□□ 2.03
HLA-C-209ENST00000495835 ATP2A2P16615 1042 aaKnown RBP27.71■■■□□ 2.03
HLA-C-209ENST00000495835 SEPT1Q8WYJ6 367 aa27.71■■■□□ 2.03
HLA-C-209ENST00000495835 RNPEPQ9H4A4 650 aa27.71■■■□□ 2.03
HLA-C-209ENST00000495835 GBF1Q92538 1859 aa27.7■■■□□ 2.03
HLA-C-209ENST00000495835 TET1Q8NFU7 2136 aa27.7■■■□□ 2.03
HLA-C-209ENST00000495835 CAND2O75155 1236 aa27.7■■■□□ 2.02
HLA-C-209ENST00000495835 SMIM10L2AP0DMW4 78 aa27.7■■■□□ 2.02
HLA-C-209ENST00000495835 SMIM10L2BP0DMW5 78 aa27.7■■■□□ 2.02
HLA-C-209ENST00000495835 MYLIPQ8WY64 445 aa27.7■■■□□ 2.02
HLA-C-209ENST00000495835 ATP6V0A1Q93050 837 aa27.7■■■□□ 2.02
HLA-C-209ENST00000495835 ANO3Q9BYT9 981 aa27.7■■■□□ 2.02
HLA-C-209ENST00000495835 SLC28A3Q9HAS3 691 aa27.7■■■□□ 2.02
HLA-C-209ENST00000495835 CYP46A1Q9Y6A2 500 aa27.7■■■□□ 2.02
HLA-C-209ENST00000495835 SREBF1P36956 1147 aa27.69■■■□□ 2.02
HLA-C-209ENST00000495835 GPNMBQ14956 572 aa27.69■■■□□ 2.02
HLA-C-209ENST00000495835 GRIN2CQ14957 1233 aa27.69■■■□□ 2.02
HLA-C-209ENST00000495835 CNKSR3Q6P9H4 555 aa27.69■■■□□ 2.02
HLA-C-209ENST00000495835 RNF26Q9BY78 433 aaPredicted RBP27.69■■■□□ 2.02
HLA-C-209ENST00000495835 ZMYND12Q9H0C1 365 aa27.69■■■□□ 2.02
HLA-C-209ENST00000495835 A0A0C4DFX4 3053 aa27.69■■■□□ 2.02
HLA-C-209ENST00000495835 KAT6AQ92794 2004 aa27.68■■■□□ 2.02
HLA-C-209ENST00000495835 EMSYQ7Z589 1322 aa27.68■■■□□ 2.02
HLA-C-209ENST00000495835 EFCAB14O75071 495 aa27.68■■■□□ 2.02
HLA-C-209ENST00000495835 FOSL2P15408 326 aa27.68■■■□□ 2.02
HLA-C-209ENST00000495835 IFNAR1P17181 557 aa27.68■■■□□ 2.02
HLA-C-209ENST00000495835 PDIA3P30101 505 aaKnown RBP27.68■■■□□ 2.02
HLA-C-209ENST00000495835 TCF7P36402 384 aaPredicted RBP27.68■■■□□ 2.02
HLA-C-209ENST00000495835 ZNF200P98182 395 aaPredicted RBP27.68■■■□□ 2.02
HLA-C-209ENST00000495835 AKAP17AQ02040 695 aaKnown RBP27.68■■■□□ 2.02
HLA-C-209ENST00000495835 HIC1Q14526 733 aa27.68■■■□□ 2.02
HLA-C-209ENST00000495835 NTRK3Q16288 839 aa27.68■■■□□ 2.02
HLA-C-209ENST00000495835 CEP55Q53EZ4 464 aa27.68■■■□□ 2.02
HLA-C-209ENST00000495835 NIPA1Q7RTP0 329 aa27.68■■■□□ 2.02
HLA-C-209ENST00000495835 C6orf50Q9HD87 102 aa27.68■■■□□ 2.02
HLA-C-209ENST00000495835 KCNH7Q9NS40 1196 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms