RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 YBX2Q9Y2T7 364 aaKnown RBP8.29□□□□□ -1.08
VPS52-221ENST00000495755 PCDHA8Q9Y5H6 950 aa8.29□□□□□ -1.08
VPS52-221ENST00000495755 UBIAD1Q9Y5Z9 338 aa8.29□□□□□ -1.08
VPS52-221ENST00000495755 VCANP13611 3396 aa8.28□□□□□ -1.08
VPS52-221ENST00000495755 GOLGA8AA7E2F4 631 aa8.28□□□□□ -1.08
VPS52-221ENST00000495755 GOLGA8BA8MQT2 603 aa8.28□□□□□ -1.08
VPS52-221ENST00000495755 H3BRB1 525 aa8.28□□□□□ -1.08
VPS52-221ENST00000495755 STXBP3O00186 592 aa8.28□□□□□ -1.08
VPS52-221ENST00000495755 NOP56O00567 594 aaKnown RBP8.28□□□□□ -1.08
VPS52-221ENST00000495755 ATP9AO75110 1047 aa8.28□□□□□ -1.08
VPS52-221ENST00000495755 REC8O95072 547 aa8.28□□□□□ -1.08
VPS52-221ENST00000495755 PARNO95453 639 aaKnown RBP8.28□□□□□ -1.08
VPS52-221ENST00000495755 CXCL10P02778 98 aa8.28□□□□□ -1.08
VPS52-221ENST00000495755 LGALS2P05162 132 aa8.28□□□□□ -1.08
VPS52-221ENST00000495755 ACTN1P12814 892 aa8.28□□□□□ -1.08
VPS52-221ENST00000495755 SELPP16109 830 aa8.28□□□□□ -1.08
VPS52-221ENST00000495755 KCNA2P16389 499 aa8.28□□□□□ -1.08
VPS52-221ENST00000495755 RPS6KB1P23443 525 aa8.28□□□□□ -1.08
VPS52-221ENST00000495755 ADD1P35611 737 aaKnown RBP8.28□□□□□ -1.08
VPS52-221ENST00000495755 RAB30Q15771 203 aa8.28□□□□□ -1.08
VPS52-221ENST00000495755 PPP1R18Q6NYC8 613 aa8.28□□□□□ -1.08
VPS52-221ENST00000495755 Q6ZUG5 572 aa8.28□□□□□ -1.08
VPS52-221ENST00000495755 LRRC8DQ7L1W4 858 aa8.28□□□□□ -1.08
VPS52-221ENST00000495755 SERINC5Q86VE9 423 aa8.28□□□□□ -1.08
VPS52-221ENST00000495755 GIMAP8Q8ND71 665 aaPredicted RBP8.28□□□□□ -1.08
VPS52-221ENST00000495755 CDHR1Q96JP9 859 aa8.28□□□□□ -1.08
VPS52-221ENST00000495755 USP26Q9BXU7 913 aa8.28□□□□□ -1.08
VPS52-221ENST00000495755 FTOQ9C0B1 505 aaKnown RBP eCLIP8.28□□□□□ -1.08
VPS52-221ENST00000495755 TUT1Q9H6E5 874 aaKnown RBP8.28□□□□□ -1.08
VPS52-221ENST00000495755 RIC8AQ9NPQ8 531 aa8.28□□□□□ -1.08
VPS52-221ENST00000495755 JADE2Q9NQC1 790 aa8.28□□□□□ -1.08
VPS52-221ENST00000495755 BARHL2Q9NY43 387 aa8.28□□□□□ -1.08
VPS52-221ENST00000495755 PCDHA11Q9Y5I1 949 aa8.28□□□□□ -1.08
VPS52-221ENST00000495755 MYH7BA7E2Y1 1941 aa8.28□□□□□ -1.08
VPS52-221ENST00000495755 CCDC196A0A1B0GTZ2 297 aa8.27□□□□□ -1.09
VPS52-221ENST00000495755 GSTTP1A0A1W2PQM5 241 aa8.27□□□□□ -1.09
VPS52-221ENST00000495755 C17orf102A2RUQ5 167 aa8.27□□□□□ -1.09
VPS52-221ENST00000495755 SPDYE3A6NKU9 549 aa8.27□□□□□ -1.09
VPS52-221ENST00000495755 ZBBXA8MT70 800 aa8.27□□□□□ -1.09
VPS52-221ENST00000495755 hCG_1984214I3L0E3 225 aa8.27□□□□□ -1.09
VPS52-221ENST00000495755 MAFGO15525 162 aa8.27□□□□□ -1.09
VPS52-221ENST00000495755 EPB41L2O43491 1005 aaKnown RBP8.27□□□□□ -1.09
VPS52-221ENST00000495755 NBNO60934 754 aa8.27□□□□□ -1.09
VPS52-221ENST00000495755 BAIAP3O94812 1187 aa8.27□□□□□ -1.09
VPS52-221ENST00000495755 FOSP01100 380 aaPredicted RBP8.27□□□□□ -1.09
VPS52-221ENST00000495755 SMIM10L2AP0DMW4 78 aa8.27□□□□□ -1.09
VPS52-221ENST00000495755 SMIM10L2BP0DMW5 78 aa8.27□□□□□ -1.09
VPS52-221ENST00000495755 MYOGP15173 224 aa8.27□□□□□ -1.09
VPS52-221ENST00000495755 FOSL2P15408 326 aa8.27□□□□□ -1.09
VPS52-221ENST00000495755 ATP2A2P16615 1042 aaKnown RBP8.27□□□□□ -1.09
VPS52-221ENST00000495755 CLK2P49760 499 aaKnown RBP8.27□□□□□ -1.09
VPS52-221ENST00000495755 METAP2P50579 478 aaKnown RBP eCLIP8.27□□□□□ -1.09
VPS52-221ENST00000495755 RABGGTBP53611 331 aa8.27□□□□□ -1.09
VPS52-221ENST00000495755 NAPAP54920 295 aa8.27□□□□□ -1.09
VPS52-221ENST00000495755 EVCP57679 992 aa8.27□□□□□ -1.09
VPS52-221ENST00000495755 FGD1P98174 961 aa8.27□□□□□ -1.09
VPS52-221ENST00000495755 APOBRQ0VD83 1088 aa8.27□□□□□ -1.09
VPS52-221ENST00000495755 MBTPS1Q14703 1052 aa8.27□□□□□ -1.09
VPS52-221ENST00000495755 PFKFB3Q16875 520 aaPredicted RBP8.27□□□□□ -1.09
VPS52-221ENST00000495755 ZNF618Q5T7W0 954 aa8.27□□□□□ -1.09
VPS52-221ENST00000495755 BLOC1S2Q6QNY1 142 aa8.27□□□□□ -1.09
VPS52-221ENST00000495755 ZNF713Q8N859 430 aaPredicted RBP8.27□□□□□ -1.09
VPS52-221ENST00000495755 MAFAQ8NHW3 353 aaPredicted RBP8.27□□□□□ -1.09
VPS52-221ENST00000495755 PHOSPHO2Q8TCD6 241 aa8.27□□□□□ -1.09
VPS52-221ENST00000495755 BRF1Q92994 677 aa8.27□□□□□ -1.09
VPS52-221ENST00000495755 NKX2-4Q9H2Z4 354 aa8.27□□□□□ -1.09
VPS52-221ENST00000495755 RNPEPQ9H4A4 650 aa8.27□□□□□ -1.09
VPS52-221ENST00000495755 XIRP2A4UGR9 3374 aa8.27□□□□□ -1.09
VPS52-221ENST00000495755 SCN5AQ14524 2016 aa8.27□□□□□ -1.09
VPS52-221ENST00000495755 CUL9Q8IWT3 2517 aa8.27□□□□□ -1.09
VPS52-221ENST00000495755 NID2Q14112 1375 aa8.26□□□□□ -1.09
VPS52-221ENST00000495755 SMCO2A6NFE2 343 aa8.26□□□□□ -1.09
VPS52-221ENST00000495755 TREHO43280 583 aa8.26□□□□□ -1.09
VPS52-221ENST00000495755 NEFLP07196 543 aa8.26□□□□□ -1.09
VPS52-221ENST00000495755 PSMA5P28066 241 aa8.26□□□□□ -1.09
VPS52-221ENST00000495755 ADCY7P51828 1080 aa8.26□□□□□ -1.09
VPS52-221ENST00000495755 ADAM17P78536 824 aa8.26□□□□□ -1.09
VPS52-221ENST00000495755 SP4Q02446 784 aa8.26□□□□□ -1.09
VPS52-221ENST00000495755 MTMR1Q13613 665 aa8.26□□□□□ -1.09
VPS52-221ENST00000495755 PKN1Q16512 942 aa8.26□□□□□ -1.09
VPS52-221ENST00000495755 TCTN1Q2MV58 587 aa8.26□□□□□ -1.09
VPS52-221ENST00000495755 UTP14CQ5TAP6 766 aaKnown RBP8.26□□□□□ -1.09
VPS52-221ENST00000495755 TRIM50Q86XT4 487 aa8.26□□□□□ -1.09
VPS52-221ENST00000495755 HERC6Q8IVU3 1022 aa8.26□□□□□ -1.09
VPS52-221ENST00000495755 CYP2W1Q8TAV3 490 aa8.26□□□□□ -1.09
VPS52-221ENST00000495755 SEPT1Q8WYJ6 367 aa8.26□□□□□ -1.09
VPS52-221ENST00000495755 ATP6V0A1Q93050 837 aa8.26□□□□□ -1.09
VPS52-221ENST00000495755 SLC9A7Q96T83 725 aa8.26□□□□□ -1.09
VPS52-221ENST00000495755 MXRA8Q9BRK3 442 aa8.26□□□□□ -1.09
VPS52-221ENST00000495755 GLT8D2Q9H1C3 349 aa8.26□□□□□ -1.09
VPS52-221ENST00000495755 PRDM12Q9H4Q4 367 aa8.26□□□□□ -1.09
VPS52-221ENST00000495755 EHMT1Q9H9B1 1298 aa8.26□□□□□ -1.09
VPS52-221ENST00000495755 SLC28A3Q9HAS3 691 aa8.26□□□□□ -1.09
VPS52-221ENST00000495755 ZSWIM6Q9HCJ5 1215 aa8.26□□□□□ -1.09
VPS52-221ENST00000495755 SETD4Q9NVD3 440 aa8.26□□□□□ -1.09
VPS52-221ENST00000495755 TMEM260Q9NX78 707 aa8.26□□□□□ -1.09
VPS52-221ENST00000495755 NAP1L2Q9ULW6 460 aaPredicted RBP8.26□□□□□ -1.09
VPS52-221ENST00000495755 TANC1Q9C0D5 1861 aa8.26□□□□□ -1.09
VPS52-221ENST00000495755 SPTBN5Q9NRC6 3674 aaKnown RBP8.25□□□□□ -1.09
VPS52-221ENST00000495755 TRIP12Q14669 1992 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms