RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 IPO5O00410 1097 aaKnown RBP19.38■□□□□ 0.69
HDAC6-235ENST00000495515 EDIL3O43854 480 aa19.38■□□□□ 0.69
HDAC6-235ENST00000495515 MARCH6O60337 910 aa19.38■□□□□ 0.69
HDAC6-235ENST00000495515 ATP9AO75110 1047 aa19.38■□□□□ 0.69
HDAC6-235ENST00000495515 FARP2O94887 1054 aaPredicted RBP19.38■□□□□ 0.69
HDAC6-235ENST00000495515 ORC2Q13416 577 aaPredicted RBP19.38■□□□□ 0.69
HDAC6-235ENST00000495515 RILPL1Q5EBL4 403 aa19.38■□□□□ 0.69
HDAC6-235ENST00000495515 BRAPQ7Z569 592 aa19.38■□□□□ 0.69
HDAC6-235ENST00000495515 JPH1Q9HDC5 661 aaPredicted RBP19.38■□□□□ 0.69
HDAC6-235ENST00000495515 POLR3EQ9NVU0 708 aa19.38■□□□□ 0.69
HDAC6-235ENST00000495515 CABYRO75952 493 aa19.37■□□□□ 0.69
HDAC6-235ENST00000495515 ATP2B1P20020 1258 aa19.37■□□□□ 0.69
HDAC6-235ENST00000495515 BEX3Q00994 111 aa19.37■□□□□ 0.69
HDAC6-235ENST00000495515 KCNA10Q16322 511 aa19.37■□□□□ 0.69
HDAC6-235ENST00000495515 DGKDQ16760 1214 aa19.37■□□□□ 0.69
HDAC6-235ENST00000495515 NECAB2Q7Z6G3 386 aa19.37■□□□□ 0.69
HDAC6-235ENST00000495515 AFG1LQ8WV93 481 aa19.37■□□□□ 0.69
HDAC6-235ENST00000495515 LENG9Q96B70 501 aa19.37■□□□□ 0.69
HDAC6-235ENST00000495515 KIAA0100Q14667 2235 aaKnown RBP19.37■□□□□ 0.69
HDAC6-235ENST00000495515 MYADML2A6NDP7 307 aa19.36■□□□□ 0.69
HDAC6-235ENST00000495515 TBX3O15119 743 aa19.36■□□□□ 0.69
HDAC6-235ENST00000495515 CTAGE5O15320 804 aa19.36■□□□□ 0.69
HDAC6-235ENST00000495515 MSH4O15457 936 aa19.36■□□□□ 0.69
HDAC6-235ENST00000495515 PPFIA4O75335 1185 aa19.36■□□□□ 0.69
HDAC6-235ENST00000495515 BAG4O95429 457 aaKnown RBP19.36■□□□□ 0.69
HDAC6-235ENST00000495515 MMP3P08254 477 aa19.36■□□□□ 0.69
HDAC6-235ENST00000495515 PTGS1P23219 599 aa19.36■□□□□ 0.69
HDAC6-235ENST00000495515 ACLYP53396 1101 aa19.36■□□□□ 0.69
HDAC6-235ENST00000495515 TTC38Q5R3I4 469 aa19.36■□□□□ 0.69
HDAC6-235ENST00000495515 FAM20AQ96MK3 541 aa19.36■□□□□ 0.69
HDAC6-235ENST00000495515 GLT1D1Q96MS3 346 aa19.36■□□□□ 0.69
HDAC6-235ENST00000495515 RIT2Q99578 217 aa19.36■□□□□ 0.69
HDAC6-235ENST00000495515 ZSCAN16Q9H4T2 348 aaPredicted RBP19.36■□□□□ 0.69
HDAC6-235ENST00000495515 SLC9A2Q9UBY0 812 aa19.36■□□□□ 0.69
HDAC6-235ENST00000495515 PHF24Q9UPV7 400 aa19.36■□□□□ 0.69
HDAC6-235ENST00000495515 MTMR6Q9Y217 621 aa19.36■□□□□ 0.69
HDAC6-235ENST00000495515 KIAA1217Q5T5P2 1943 aa19.35■□□□□ 0.69
HDAC6-235ENST00000495515 TNRC18O15417 2968 aaPredicted RBP19.35■□□□□ 0.69
HDAC6-235ENST00000495515 SLC37A4O43826 429 aa19.35■□□□□ 0.69
HDAC6-235ENST00000495515 SORBS3O60504 671 aa19.35■□□□□ 0.69
HDAC6-235ENST00000495515 NEMFO60524 1076 aa19.35■□□□□ 0.69
HDAC6-235ENST00000495515 GAS7O60861 476 aa19.35■□□□□ 0.69
HDAC6-235ENST00000495515 ASGR1P07306 291 aa19.35■□□□□ 0.69
HDAC6-235ENST00000495515 ITGB3BPQ13352 177 aaPredicted RBP19.35■□□□□ 0.69
HDAC6-235ENST00000495515 HSDL1Q3SXM5 330 aa19.35■□□□□ 0.69
HDAC6-235ENST00000495515 CCSAPQ6IQ19 270 aaPredicted RBP19.35■□□□□ 0.69
HDAC6-235ENST00000495515 SLFN12Q8IYM2 578 aa19.35■□□□□ 0.69
HDAC6-235ENST00000495515 SLC5A5Q92911 643 aa19.35■□□□□ 0.69
HDAC6-235ENST00000495515 C11orf49Q9H6J7 331 aa19.35■□□□□ 0.69
HDAC6-235ENST00000495515 MYL3P08590 195 aa19.34■□□□□ 0.69
HDAC6-235ENST00000495515 MCM7P33993 719 aa19.34■□□□□ 0.69
HDAC6-235ENST00000495515 KRT76Q01546 638 aa19.34■□□□□ 0.69
HDAC6-235ENST00000495515 SP4Q02446 784 aa19.34■□□□□ 0.69
HDAC6-235ENST00000495515 CALCRLQ16602 461 aa19.34■□□□□ 0.69
HDAC6-235ENST00000495515 LRCH2Q5VUJ6 765 aa19.34■□□□□ 0.69
HDAC6-235ENST00000495515 FERMT3Q86UX7 667 aa19.34■□□□□ 0.69
HDAC6-235ENST00000495515 SEPT1Q8WYJ6 367 aa19.34■□□□□ 0.69
HDAC6-235ENST00000495515 VTI1AQ96AJ9 217 aa19.34■□□□□ 0.69
HDAC6-235ENST00000495515 PAWRQ96IZ0 340 aaKnown RBP19.34■□□□□ 0.69
HDAC6-235ENST00000495515 GPR20Q99678 358 aa19.34■□□□□ 0.69
HDAC6-235ENST00000495515 TEKT3Q9BXF9 490 aa19.34■□□□□ 0.69
HDAC6-235ENST00000495515 MYH7BA7E2Y1 1941 aa19.33■□□□□ 0.69
HDAC6-235ENST00000495515 DDX39AO00148 427 aaKnown RBP19.33■□□□□ 0.68
HDAC6-235ENST00000495515 HOXD8P13378 290 aaPredicted RBP19.33■□□□□ 0.68
HDAC6-235ENST00000495515 MNX1P50219 401 aaPredicted RBP19.33■□□□□ 0.68
HDAC6-235ENST00000495515 IRX5P78411 483 aaPredicted RBP19.33■□□□□ 0.68
HDAC6-235ENST00000495515 ZNF174Q15697 407 aa19.33■□□□□ 0.68
HDAC6-235ENST00000495515 ZNF746Q6NUN9 644 aaPredicted RBP19.33■□□□□ 0.68
HDAC6-235ENST00000495515 POTEDQ86YR6 584 aa19.33■□□□□ 0.68
HDAC6-235ENST00000495515 ETNPPLQ8TBG4 499 aa19.33■□□□□ 0.68
HDAC6-235ENST00000495515 MTG1Q9BT17 334 aaPredicted RBP19.33■□□□□ 0.68
HDAC6-235ENST00000495515 SENP6Q9GZR1 1112 aaPredicted RBP19.33■□□□□ 0.68
HDAC6-235ENST00000495515 BCAS3Q9H6U6 928 aa19.33■□□□□ 0.68
HDAC6-235ENST00000495515 KCNMB3Q9NPA1 279 aa19.33■□□□□ 0.68
HDAC6-235ENST00000495515 STARD7Q9NQZ5 370 aa19.33■□□□□ 0.68
HDAC6-235ENST00000495515 ELP1O95163 1332 aa19.32■□□□□ 0.68
HDAC6-235ENST00000495515 A0A1W2PQ45 241 aaPredicted RBP19.32■□□□□ 0.68
HDAC6-235ENST00000495515 A0A1W2PQY0 241 aa19.32■□□□□ 0.68
HDAC6-235ENST00000495515 DHX15O43143 795 aaKnown RBP19.32■□□□□ 0.68
HDAC6-235ENST00000495515 COL6A1P12109 1028 aa19.32■□□□□ 0.68
HDAC6-235ENST00000495515 PURAQ00577 322 aaKnown RBP19.32■□□□□ 0.68
HDAC6-235ENST00000495515 CXCL17Q6UXB2 119 aa19.32■□□□□ 0.68
HDAC6-235ENST00000495515 SMAP1Q8IYB5 467 aaPredicted RBP19.32■□□□□ 0.68
HDAC6-235ENST00000495515 DIS3LQ8TF46 1054 aaKnown RBP19.32■□□□□ 0.68
HDAC6-235ENST00000495515 FERMT2Q96AC1 680 aa19.32■□□□□ 0.68
HDAC6-235ENST00000495515 KATNAL1Q9BW62 490 aa19.32■□□□□ 0.68
HDAC6-235ENST00000495515 SEZ6LQ9BYH1 1024 aa19.32■□□□□ 0.68
HDAC6-235ENST00000495515 ZSCAN22P10073 491 aaPredicted RBP19.31■□□□□ 0.68
HDAC6-235ENST00000495515 SFNP31947 248 aa19.31■□□□□ 0.68
HDAC6-235ENST00000495515 TCF7P36402 384 aaPredicted RBP19.31■□□□□ 0.68
HDAC6-235ENST00000495515 TOB1P50616 345 aaPredicted RBP19.31■□□□□ 0.68
HDAC6-235ENST00000495515 ACTR2P61160 394 aa19.31■□□□□ 0.68
HDAC6-235ENST00000495515 RESTQ13127 1097 aa19.31■□□□□ 0.68
HDAC6-235ENST00000495515 MIS18BP1Q6P0N0 1132 aa19.31■□□□□ 0.68
HDAC6-235ENST00000495515 UBE2Q1Q7Z7E8 422 aa19.31■□□□□ 0.68
HDAC6-235ENST00000495515 UIMC1Q96RL1 719 aa19.31■□□□□ 0.68
HDAC6-235ENST00000495515 AZI2Q9H6S1 392 aa19.31■□□□□ 0.68
HDAC6-235ENST00000495515 ZNF215Q9UL58 517 aaPredicted RBP19.31■□□□□ 0.68
HDAC6-235ENST00000495515 WDR64B1ANS9 1081 aa19.3■□□□□ 0.68
HDAC6-235ENST00000495515 LAD1O00515 517 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms