RNA–Protein interactions for RNA: ENST00000494934.5

SRRM1-218, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-218ENST00000494934 OSTM1Q86WC4 334 aa7.23□□□□□ -1.25
SRRM1-218ENST00000494934 WDR75Q8IWA0 830 aaKnown RBP7.23□□□□□ -1.25
SRRM1-218ENST00000494934 C2orf69Q8N8R5 385 aa7.23□□□□□ -1.25
SRRM1-218ENST00000494934 PDZD8Q8NEN9 1154 aa7.23□□□□□ -1.25
SRRM1-218ENST00000494934 SH3RF2Q8TEC5 729 aa7.23□□□□□ -1.25
SRRM1-218ENST00000494934 CDH19Q9H159 772 aa7.23□□□□□ -1.25
SRRM1-218ENST00000494934 H7BY64 318 aa7.22□□□□□ -1.25
SRRM1-218ENST00000494934 K7ESF4 209 aa7.22□□□□□ -1.25
SRRM1-218ENST00000494934 DVL2O14641 736 aa7.22□□□□□ -1.25
SRRM1-218ENST00000494934 NKRFO15226 690 aaKnown RBP eCLIP7.22□□□□□ -1.25
SRRM1-218ENST00000494934 KRT15P19012 456 aa7.22□□□□□ -1.25
SRRM1-218ENST00000494934 KIR2DL1P43626 348 aaPredicted RBP7.22□□□□□ -1.25
SRRM1-218ENST00000494934 KIR2DL2P43627 348 aaPredicted RBP7.22□□□□□ -1.25
SRRM1-218ENST00000494934 KPNA1P52294 538 aaPredicted RBP7.22□□□□□ -1.25
SRRM1-218ENST00000494934 NR0B2Q15466 257 aa7.22□□□□□ -1.25
SRRM1-218ENST00000494934 INAVAQ3KP66 663 aa7.22□□□□□ -1.25
SRRM1-218ENST00000494934 CEP68Q76N32 757 aa7.22□□□□□ -1.25
SRRM1-218ENST00000494934 ZBTB46Q86UZ6 589 aa7.22□□□□□ -1.25
SRRM1-218ENST00000494934 NOSTRINQ8IVI9 506 aa7.22□□□□□ -1.25
SRRM1-218ENST00000494934 PLEKHO2Q8TD55 490 aa7.22□□□□□ -1.25
SRRM1-218ENST00000494934 SLC5A5Q92911 643 aa7.22□□□□□ -1.25
SRRM1-218ENST00000494934 CHMP4CQ96CF2 233 aa7.22□□□□□ -1.25
SRRM1-218ENST00000494934 TMEM169Q96HH4 297 aa7.22□□□□□ -1.25
SRRM1-218ENST00000494934 C8orf48Q96LL4 319 aa7.22□□□□□ -1.25
SRRM1-218ENST00000494934 PLCD4Q9BRC7 762 aa7.22□□□□□ -1.25
SRRM1-218ENST00000494934 MTA3Q9BTC8 594 aa7.22□□□□□ -1.25
SRRM1-218ENST00000494934 C19orf44Q9H6X5 657 aa7.22□□□□□ -1.25
SRRM1-218ENST00000494934 TNFRSF10DQ9UBN6 386 aa7.22□□□□□ -1.25
SRRM1-218ENST00000494934 RWDD3Q9Y3V2 267 aa7.22□□□□□ -1.25
SRRM1-218ENST00000494934 CCDC194A0A1B0GVG4 234 aa7.21□□□□□ -1.26
SRRM1-218ENST00000494934 MAN2B1O00754 1011 aa7.21□□□□□ -1.26
SRRM1-218ENST00000494934 PRPF3O43395 683 aaKnown RBP7.21□□□□□ -1.26
SRRM1-218ENST00000494934 PSPNO60542 156 aa7.21□□□□□ -1.26
SRRM1-218ENST00000494934 FBXO21O94952 628 aa7.21□□□□□ -1.26
SRRM1-218ENST00000494934 MAP4K4O95819 1239 aaPredicted RBP7.21□□□□□ -1.26
SRRM1-218ENST00000494934 MT-CO1P00395 513 aa7.21□□□□□ -1.26
SRRM1-218ENST00000494934 GTF2A2P52657 109 aa7.21□□□□□ -1.26
SRRM1-218ENST00000494934 CRY1Q16526 586 aa7.21□□□□□ -1.26
SRRM1-218ENST00000494934 HSF5Q4G112 596 aaPredicted RBP7.21□□□□□ -1.26
SRRM1-218ENST00000494934 ATG4DQ86TL0 474 aaPredicted RBP7.21□□□□□ -1.26
SRRM1-218ENST00000494934 PTRH1Q86Y79 214 aaKnown RBP7.21□□□□□ -1.26
SRRM1-218ENST00000494934 ANKS4BQ8N8V4 417 aa7.21□□□□□ -1.26
SRRM1-218ENST00000494934 BOCQ9BWV1 1114 aa7.21□□□□□ -1.26
SRRM1-218ENST00000494934 AASDHPPTQ9NRN7 309 aa7.21□□□□□ -1.26
SRRM1-218ENST00000494934 CARMIL2Q6F5E8 1435 aa7.2□□□□□ -1.26
SRRM1-218ENST00000494934 LCHNA4D1U4 455 aa7.2□□□□□ -1.26
SRRM1-218ENST00000494934 NRDCO43847 1150 aa7.2□□□□□ -1.26
SRRM1-218ENST00000494934 ABLIM3O94929 683 aa7.2□□□□□ -1.26
SRRM1-218ENST00000494934 MSL3P1P0C860 447 aa7.2□□□□□ -1.26
SRRM1-218ENST00000494934 GNAT1P11488 350 aa7.2□□□□□ -1.26
SRRM1-218ENST00000494934 IRF9Q00978 393 aa7.2□□□□□ -1.26
SRRM1-218ENST00000494934 DUSP4Q13115 394 aa7.2□□□□□ -1.26
SRRM1-218ENST00000494934 GPR19Q15760 415 aa7.2□□□□□ -1.26
SRRM1-218ENST00000494934 PTPN21Q16825 1174 aa7.2□□□□□ -1.26
SRRM1-218ENST00000494934 HLA-DQA1Q5Y7H0 255 aa7.2□□□□□ -1.26
SRRM1-218ENST00000494934 HHIPL2Q6UWX4 724 aa7.2□□□□□ -1.26
SRRM1-218ENST00000494934 ARHGAP36Q6ZRI8 547 aa7.2□□□□□ -1.26
SRRM1-218ENST00000494934 OTOP3Q7RTS5 596 aa7.2□□□□□ -1.26
SRRM1-218ENST00000494934 CMIPQ8IY22 773 aa7.2□□□□□ -1.26
SRRM1-218ENST00000494934 EFHBQ8N7U6 833 aa7.2□□□□□ -1.26
SRRM1-218ENST00000494934 PIP4K2CQ8TBX8 421 aa7.2□□□□□ -1.26
SRRM1-218ENST00000494934 X6R8D5 127 aa7.2□□□□□ -1.26
SRRM1-218ENST00000494934 SLC12A8A0AV02 714 aa7.19□□□□□ -1.26
SRRM1-218ENST00000494934 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.19□□□□□ -1.26
SRRM1-218ENST00000494934 C22orf46C9J442 243 aa7.19□□□□□ -1.26
SRRM1-218ENST00000494934 GSTA4O15217 222 aa7.19□□□□□ -1.26
SRRM1-218ENST00000494934 ULK1O75385 1050 aa7.19□□□□□ -1.26
SRRM1-218ENST00000494934 FUCA1P04066 466 aa7.19□□□□□ -1.26
SRRM1-218ENST00000494934 SLC9A1P19634 815 aa7.19□□□□□ -1.26
SRRM1-218ENST00000494934 GALK1P51570 392 aa7.19□□□□□ -1.26
SRRM1-218ENST00000494934 OCRLQ01968 901 aa7.19□□□□□ -1.26
SRRM1-218ENST00000494934 DDB1Q16531 1140 aa7.19□□□□□ -1.26
SRRM1-218ENST00000494934 BROXQ5VW32 411 aa7.19□□□□□ -1.26
SRRM1-218ENST00000494934 NLRX1Q86UT6 975 aa7.19□□□□□ -1.26
SRRM1-218ENST00000494934 C11orf74Q86VG3 221 aa7.19□□□□□ -1.26
SRRM1-218ENST00000494934 TRMT2BQ96GJ1 504 aaKnown RBP7.19□□□□□ -1.26
SRRM1-218ENST00000494934 CCDC120Q96HB5 630 aa7.19□□□□□ -1.26
SRRM1-218ENST00000494934 MENTQ9BUN1 341 aa7.19□□□□□ -1.26
SRRM1-218ENST00000494934 RHOBTB2Q9BYZ6 727 aa7.19□□□□□ -1.26
SRRM1-218ENST00000494934 C14orf119Q9NWQ9 140 aa7.19□□□□□ -1.26
SRRM1-218ENST00000494934 SRPK3Q9UPE1 567 aa7.19□□□□□ -1.26
SRRM1-218ENST00000494934 A0A1W2PQ45 241 aaPredicted RBP7.18□□□□□ -1.26
SRRM1-218ENST00000494934 A0A1W2PQY0 241 aa7.18□□□□□ -1.26
SRRM1-218ENST00000494934 FITM1A5D6W6 292 aa7.18□□□□□ -1.26
SRRM1-218ENST00000494934 H7C1D1 291 aa7.18□□□□□ -1.26
SRRM1-218ENST00000494934 MYBL2P10244 700 aa7.18□□□□□ -1.26
SRRM1-218ENST00000494934 TACR1P25103 407 aa7.18□□□□□ -1.26
SRRM1-218ENST00000494934 RTP1P59025 263 aa7.18□□□□□ -1.26
SRRM1-218ENST00000494934 CHRNEQ04844 493 aa7.18□□□□□ -1.26
SRRM1-218ENST00000494934 SEC23AQ15436 765 aa7.18□□□□□ -1.26
SRRM1-218ENST00000494934 ARHGAP44Q17R89 818 aa7.18□□□□□ -1.26
SRRM1-218ENST00000494934 CPZQ66K79 652 aa7.18□□□□□ -1.26
SRRM1-218ENST00000494934 CEP128Q6ZU80 1094 aa7.18□□□□□ -1.26
SRRM1-218ENST00000494934 C14orf80Q86SX3 495 aa7.18□□□□□ -1.26
SRRM1-218ENST00000494934 CCDC146Q8IYE0 955 aa7.18□□□□□ -1.26
SRRM1-218ENST00000494934 KIAA1958Q8N8K9 716 aa7.18□□□□□ -1.26
SRRM1-218ENST00000494934 ELF4Q99607 663 aaPredicted RBP7.18□□□□□ -1.26
SRRM1-218ENST00000494934 CD244Q9BZW8 370 aa7.18□□□□□ -1.26
SRRM1-218ENST00000494934 EPB41L1Q9H4G0 881 aa7.18□□□□□ -1.26
SRRM1-218ENST00000494934 IMPACTQ9P2X3 320 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms