RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 SNCAIPQ9Y6H5 919 aa20.64■□□□□ 0.89
TSPAN4-212ENST00000494815 VGLL3A8MV65 326 aa20.63■□□□□ 0.89
TSPAN4-212ENST00000494815 MEIS1O00470 390 aa20.63■□□□□ 0.89
TSPAN4-212ENST00000494815 DSG3P32926 999 aa20.63■□□□□ 0.89
TSPAN4-212ENST00000494815 VGLL4Q14135 290 aa20.63■□□□□ 0.89
TSPAN4-212ENST00000494815 COG2Q14746 738 aa20.63■□□□□ 0.89
TSPAN4-212ENST00000494815 NCAPH2Q6IBW4 605 aa20.63■□□□□ 0.89
TSPAN4-212ENST00000494815 SYT10Q6XYQ8 523 aa20.63■□□□□ 0.89
TSPAN4-212ENST00000494815 KRT26Q7Z3Y9 468 aa20.63■□□□□ 0.89
TSPAN4-212ENST00000494815 SLC5A5Q92911 643 aa20.63■□□□□ 0.89
TSPAN4-212ENST00000494815 DHTKD1Q96HY7 919 aaPredicted RBP20.63■□□□□ 0.89
TSPAN4-212ENST00000494815 UIMC1Q96RL1 719 aa20.63■□□□□ 0.89
TSPAN4-212ENST00000494815 KIAA1024Q9UPX6 916 aa20.63■□□□□ 0.89
TSPAN4-212ENST00000494815 POTEB3A0JP26 581 aa20.63■□□□□ 0.89
TSPAN4-212ENST00000494815 POTECB2RU33 542 aa20.63■□□□□ 0.89
TSPAN4-212ENST00000494815 ADM5C9JUS6 153 aa20.63■□□□□ 0.89
TSPAN4-212ENST00000494815 PRKG1Q13976 671 aa20.63■□□□□ 0.89
TSPAN4-212ENST00000494815 POTEBQ6S5H4 581 aa20.63■□□□□ 0.89
TSPAN4-212ENST00000494815 MYPNQ86TC9 1320 aa20.63■□□□□ 0.89
TSPAN4-212ENST00000494815 CTAGE1Q96RT6 745 aa20.63■□□□□ 0.89
TSPAN4-212ENST00000494815 CSADQ9Y600 493 aa20.63■□□□□ 0.89
TSPAN4-212ENST00000494815 SRCAPQ6ZRS2 3230 aa20.62■□□□□ 0.89
TSPAN4-212ENST00000494815 FRMPD4Q14CM0 1322 aa20.62■□□□□ 0.89
TSPAN4-212ENST00000494815 MED24O75448 989 aa20.62■□□□□ 0.89
TSPAN4-212ENST00000494815 BMS1Q14692 1282 aaKnown RBP20.62■□□□□ 0.89
TSPAN4-212ENST00000494815 HSP90AA4PQ58FG1 418 aa20.62■□□□□ 0.89
TSPAN4-212ENST00000494815 MUM1L1Q5H9M0 696 aa20.62■□□□□ 0.89
TSPAN4-212ENST00000494815 CATSPERGQ6ZRH7 1159 aa20.62■□□□□ 0.89
TSPAN4-212ENST00000494815 PAXIP1Q6ZW49 1069 aaPredicted RBP20.62■□□□□ 0.89
TSPAN4-212ENST00000494815 CREBRFQ8IUR6 639 aa20.62■□□□□ 0.89
TSPAN4-212ENST00000494815 VSTM4Q8IW00 320 aa20.62■□□□□ 0.89
TSPAN4-212ENST00000494815 REPS2Q8NFH8 660 aa20.62■□□□□ 0.89
TSPAN4-212ENST00000494815 SYTL5Q8TDW5 730 aaPredicted RBP20.62■□□□□ 0.89
TSPAN4-212ENST00000494815 DDX12PQ92771 950 aa20.62■□□□□ 0.89
TSPAN4-212ENST00000494815 BMP2KQ9NSY1 1161 aaPredicted RBP20.62■□□□□ 0.89
TSPAN4-212ENST00000494815 COL20A1Q9P218 1284 aa20.62■□□□□ 0.89
TSPAN4-212ENST00000494815 RLFQ13129 1914 aa20.62■□□□□ 0.89
TSPAN4-212ENST00000494815 PSMD10O75832 226 aa20.62■□□□□ 0.89
TSPAN4-212ENST00000494815 BCRP11274 1271 aa20.62■□□□□ 0.89
TSPAN4-212ENST00000494815 UBXN2AP68543 259 aa20.62■□□□□ 0.89
TSPAN4-212ENST00000494815 SPAG1Q07617 926 aa20.62■□□□□ 0.89
TSPAN4-212ENST00000494815 PPP2R5CQ13362 524 aa20.62■□□□□ 0.89
TSPAN4-212ENST00000494815 ERCC6LQ2NKX8 1250 aa20.62■□□□□ 0.89
TSPAN4-212ENST00000494815 NIPA1Q7RTP0 329 aa20.62■□□□□ 0.89
TSPAN4-212ENST00000494815 CATSPER3Q86XQ3 398 aa20.62■□□□□ 0.89
TSPAN4-212ENST00000494815 TRERF1Q96PN7 1200 aa20.62■□□□□ 0.89
TSPAN4-212ENST00000494815 MXRA8Q9BRK3 442 aa20.62■□□□□ 0.89
TSPAN4-212ENST00000494815 HOMER2Q9NSB8 354 aa20.62■□□□□ 0.89
TSPAN4-212ENST00000494815 MAPK8IP1Q9UQF2 711 aa20.62■□□□□ 0.89
TSPAN4-212ENST00000494815 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.62■□□□□ 0.89
TSPAN4-212ENST00000494815 RBBP6Q7Z6E9 1792 aaKnown RBP20.61■□□□□ 0.89
TSPAN4-212ENST00000494815 PAPPA2Q9BXP8 1791 aa20.61■□□□□ 0.89
TSPAN4-212ENST00000494815 A0A1B0GTH6 734 aa20.61■□□□□ 0.89
TSPAN4-212ENST00000494815 CCDC66A2RUB6 948 aa20.61■□□□□ 0.89
TSPAN4-212ENST00000494815 ATP2A1O14983 1001 aa20.61■□□□□ 0.89
TSPAN4-212ENST00000494815 CCP110O43303 1012 aa20.61■□□□□ 0.89
TSPAN4-212ENST00000494815 IREB2P48200 963 aaKnown RBP20.61■□□□□ 0.89
TSPAN4-212ENST00000494815 STK4Q13043 487 aa20.61■□□□□ 0.89
TSPAN4-212ENST00000494815 LRCH2Q5VUJ6 765 aa20.61■□□□□ 0.89
TSPAN4-212ENST00000494815 POLR3CQ9BUI4 534 aaPredicted RBP20.61■□□□□ 0.89
TSPAN4-212ENST00000494815 INTS13Q9NVM9 706 aa20.61■□□□□ 0.89
TSPAN4-212ENST00000494815 PLA2G4BP0C869 781 aa20.61■□□□□ 0.89
TSPAN4-212ENST00000494815 SPATA31C1P0DKV0 1188 aa20.61■□□□□ 0.89
TSPAN4-212ENST00000494815 EPHX2P34913 555 aa20.61■□□□□ 0.89
TSPAN4-212ENST00000494815 RPS6P62753 249 aaKnown RBP20.61■□□□□ 0.89
TSPAN4-212ENST00000494815 PSMD2Q13200 908 aa20.61■□□□□ 0.89
TSPAN4-212ENST00000494815 PCNX4Q63HM2 1172 aa20.61■□□□□ 0.89
TSPAN4-212ENST00000494815 OTOP1Q7RTM1 612 aa20.61■□□□□ 0.89
TSPAN4-212ENST00000494815 APTXQ7Z2E3 356 aaKnown RBP20.61■□□□□ 0.89
TSPAN4-212ENST00000494815 WDR11Q9BZH6 1224 aa20.61■□□□□ 0.89
TSPAN4-212ENST00000494815 HOXC10Q9NYD6 342 aa20.61■□□□□ 0.89
TSPAN4-212ENST00000494815 DYMQ7RTS9 669 aa20.6■□□□□ 0.89
TSPAN4-212ENST00000494815 WNK4Q96J92 1243 aa20.6■□□□□ 0.89
TSPAN4-212ENST00000494815 MAF1Q9H063 256 aa20.6■□□□□ 0.89
TSPAN4-212ENST00000494815 RNF146Q9NTX7 359 aa20.6■□□□□ 0.89
TSPAN4-212ENST00000494815 PHLPP2Q6ZVD8 1323 aa20.59■□□□□ 0.89
TSPAN4-212ENST00000494815 BICDL2A1A5D9 508 aa20.59■□□□□ 0.89
TSPAN4-212ENST00000494815 E9PMD0 336 aa20.59■□□□□ 0.89
TSPAN4-212ENST00000494815 GAS7O60861 476 aa20.59■□□□□ 0.89
TSPAN4-212ENST00000494815 NF2P35240 595 aa20.59■□□□□ 0.89
TSPAN4-212ENST00000494815 EHHADHQ08426 723 aa20.59■□□□□ 0.89
TSPAN4-212ENST00000494815 RNF207Q6ZRF8 634 aa20.59■□□□□ 0.89
TSPAN4-212ENST00000494815 DNAJC19Q96DA6 116 aa20.59■□□□□ 0.89
TSPAN4-212ENST00000494815 RIT2Q99578 217 aa20.59■□□□□ 0.89
TSPAN4-212ENST00000494815 ZNF577Q9BSK1 485 aa20.59■□□□□ 0.89
TSPAN4-212ENST00000494815 ZNF214Q9UL59 606 aaPredicted RBP20.59■□□□□ 0.89
TSPAN4-212ENST00000494815 DNM3Q9UQ16 869 aa20.59■□□□□ 0.89
TSPAN4-212ENST00000494815 POTEFA5A3E0 1075 aa20.59■□□□□ 0.89
TSPAN4-212ENST00000494815 POTEIP0CG38 1075 aa20.59■□□□□ 0.89
TSPAN4-212ENST00000494815 FCER1AP12319 257 aa20.59■□□□□ 0.89
TSPAN4-212ENST00000494815 NR1I3Q14994 352 aa20.59■□□□□ 0.89
TSPAN4-212ENST00000494815 POTEGQ6S5H5 508 aa20.59■□□□□ 0.89
TSPAN4-212ENST00000494815 POTEEQ6S8J3 1075 aa20.59■□□□□ 0.89
TSPAN4-212ENST00000494815 DLK2Q6UY11 383 aa20.59■□□□□ 0.89
TSPAN4-212ENST00000494815 KIAA0895Q8NCT3 520 aa20.59■□□□□ 0.89
TSPAN4-212ENST00000494815 LRRN4CLQ8ND94 238 aa20.59■□□□□ 0.89
TSPAN4-212ENST00000494815 ANKRD20A12PQ8NF67 263 aa20.59■□□□□ 0.89
TSPAN4-212ENST00000494815 NOC3LQ8WTT2 800 aaKnown RBP20.59■□□□□ 0.89
TSPAN4-212ENST00000494815 LIMA1Q9UHB6 759 aaKnown RBP20.59■□□□□ 0.89
TSPAN4-212ENST00000494815 GLTPD2A6NH11 291 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms