RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, humanhuman

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-222ENST00000494672 ZNF536O15090 1300 aa6.84□□□□□ -1.31
CCDC66-222ENST00000494672 PABPC1P11940 636 aaKnown RBP6.84□□□□□ -1.31
CCDC66-222ENST00000494672 ZNF28P17035 718 aa6.84□□□□□ -1.31
CCDC66-222ENST00000494672 MAGEA10P43363 369 aaPredicted RBP6.84□□□□□ -1.31
CCDC66-222ENST00000494672 SPIRE1Q08AE8 756 aa6.84□□□□□ -1.31
CCDC66-222ENST00000494672 SURF1Q15526 300 aa6.84□□□□□ -1.31
CCDC66-222ENST00000494672 ZXDCQ2QGD7 858 aaPredicted RBP6.84□□□□□ -1.31
CCDC66-222ENST00000494672 TBC1D10BQ4KMP7 808 aaPredicted RBP6.84□□□□□ -1.31
CCDC66-222ENST00000494672 DPH6Q7L8W6 267 aa6.84□□□□□ -1.31
CCDC66-222ENST00000494672 GGNQ86UU5 652 aa6.84□□□□□ -1.31
CCDC66-222ENST00000494672 PIP4K2CQ8TBX8 421 aa6.84□□□□□ -1.31
CCDC66-222ENST00000494672 TMEM168Q9H0V1 697 aa6.84□□□□□ -1.31
CCDC66-222ENST00000494672 SMPD4Q9NXE4 827 aa6.84□□□□□ -1.31
CCDC66-222ENST00000494672 HSPBP1Q9NZL4 362 aa6.84□□□□□ -1.31
CCDC66-222ENST00000494672 JAG2Q9Y219 1238 aa6.84□□□□□ -1.31
CCDC66-222ENST00000494672 TRAV20A0A0B4J274 112 aa6.83□□□□□ -1.32
CCDC66-222ENST00000494672 E9PSI1 815 aa6.83□□□□□ -1.32
CCDC66-222ENST00000494672 STK10O94804 968 aaKnown RBP6.83□□□□□ -1.32
CCDC66-222ENST00000494672 KRTAP10-2P60368 255 aa6.83□□□□□ -1.32
CCDC66-222ENST00000494672 IFRD2Q12894 506 aaPredicted RBP6.83□□□□□ -1.32
CCDC66-222ENST00000494672 KIZQ2M2Z5 673 aa6.83□□□□□ -1.32
CCDC66-222ENST00000494672 KCNT2Q6UVM3 1135 aa6.83□□□□□ -1.32
CCDC66-222ENST00000494672 LBX2Q6XYB7 198 aa6.83□□□□□ -1.32
CCDC66-222ENST00000494672 IFNL3Q8IZI9 196 aa6.83□□□□□ -1.32
CCDC66-222ENST00000494672 OSBP2Q969R2 916 aa6.83□□□□□ -1.32
CCDC66-222ENST00000494672 ZNF669Q96BR6 464 aaPredicted RBP6.83□□□□□ -1.32
CCDC66-222ENST00000494672 ZSWIM3Q96MP5 696 aa6.83□□□□□ -1.32
CCDC66-222ENST00000494672 SAMD11Q96NU1 681 aa6.83□□□□□ -1.32
CCDC66-222ENST00000494672 ARHGEF4Q9NR80 690 aa6.83□□□□□ -1.32
CCDC66-222ENST00000494672 SLC27A2O14975 620 aa6.82□□□□□ -1.32
CCDC66-222ENST00000494672 U2SURPO15042 1029 aaKnown RBP6.82□□□□□ -1.32
CCDC66-222ENST00000494672 GPR85P60893 370 aa6.82□□□□□ -1.32
CCDC66-222ENST00000494672 GLB1LQ6UWU2 654 aa6.82□□□□□ -1.32
CCDC66-222ENST00000494672 OTOP3Q7RTS5 596 aa6.82□□□□□ -1.32
CCDC66-222ENST00000494672 PLEKHH3Q7Z736 793 aa6.82□□□□□ -1.32
CCDC66-222ENST00000494672 CKAP2LQ8IYA6 745 aa6.82□□□□□ -1.32
CCDC66-222ENST00000494672 TTLL11Q8NHH1 800 aa6.82□□□□□ -1.32
CCDC66-222ENST00000494672 CLEC4DQ8WXI8 215 aa6.82□□□□□ -1.32
CCDC66-222ENST00000494672 LOXL4Q96JB6 756 aa6.82□□□□□ -1.32
CCDC66-222ENST00000494672 YTHDC1Q96MU7 727 aaKnown RBP6.82□□□□□ -1.32
CCDC66-222ENST00000494672 KCNJ15Q99712 375 aa6.82□□□□□ -1.32
CCDC66-222ENST00000494672 PPARGC1AQ9UBK2 798 aaKnown RBP6.82□□□□□ -1.32
CCDC66-222ENST00000494672 FTSJ1Q9UET6 329 aa6.82□□□□□ -1.32
CCDC66-222ENST00000494672 GNAT1P11488 350 aa6.81□□□□□ -1.32
CCDC66-222ENST00000494672 INSRRP14616 1297 aa6.81□□□□□ -1.32
CCDC66-222ENST00000494672 MLLT6P55198 1093 aaPredicted RBP6.81□□□□□ -1.32
CCDC66-222ENST00000494672 GRIN1Q05586 938 aa6.81□□□□□ -1.32
CCDC66-222ENST00000494672 TMC5Q6UXY8 1006 aa6.81□□□□□ -1.32
CCDC66-222ENST00000494672 IGSF5Q9NSI5 407 aa6.81□□□□□ -1.32
CCDC66-222ENST00000494672 PPP1R1BQ9UD71 204 aaPredicted RBP6.81□□□□□ -1.32
CCDC66-222ENST00000494672 MYRFQ9Y2G1 1151 aa6.81□□□□□ -1.32
CCDC66-222ENST00000494672 FAM47E-STBD1D6RA91 191 aa6.8□□□□□ -1.32
CCDC66-222ENST00000494672 COL6A2P12110 1019 aa6.8□□□□□ -1.32
CCDC66-222ENST00000494672 GRK2P25098 689 aa6.8□□□□□ -1.32
CCDC66-222ENST00000494672 GRK3P35626 688 aa6.8□□□□□ -1.32
CCDC66-222ENST00000494672 TUSC3Q13454 348 aa6.8□□□□□ -1.32
CCDC66-222ENST00000494672 NTRK3Q16288 839 aa6.8□□□□□ -1.32
CCDC66-222ENST00000494672 VASNQ6EMK4 673 aa6.8□□□□□ -1.32
CCDC66-222ENST00000494672 STYK1Q6J9G0 422 aa6.8□□□□□ -1.32
CCDC66-222ENST00000494672 TRMT10BQ6PF06 316 aaKnown RBP6.8□□□□□ -1.32
CCDC66-222ENST00000494672 TTC9BQ8N6N2 239 aa6.8□□□□□ -1.32
CCDC66-222ENST00000494672 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.8□□□□□ -1.32
CCDC66-222ENST00000494672 UBE2Q2Q8WVN8 375 aa6.8□□□□□ -1.32
CCDC66-222ENST00000494672 LAMTOR5O43504 91 aa6.79□□□□□ -1.32
CCDC66-222ENST00000494672 B4GALT3O60512 393 aa6.79□□□□□ -1.32
CCDC66-222ENST00000494672 SOD2P04179 222 aa6.79□□□□□ -1.32
CCDC66-222ENST00000494672 ZC3H6P61129 1189 aaKnown RBP6.79□□□□□ -1.32
CCDC66-222ENST00000494672 ADAM17P78536 824 aa6.79□□□□□ -1.32
CCDC66-222ENST00000494672 SCUBE1Q8IWY4 988 aa6.79□□□□□ -1.32
CCDC66-222ENST00000494672 RBM12BQ8IXT5 1001 aaKnown RBP6.79□□□□□ -1.32
CCDC66-222ENST00000494672 KLHL36Q8N4N3 616 aa6.79□□□□□ -1.32
CCDC66-222ENST00000494672 CHST13Q8NET6 341 aa6.79□□□□□ -1.32
CCDC66-222ENST00000494672 UHMK1Q8TAS1 419 aaKnown RBP6.79□□□□□ -1.32
CCDC66-222ENST00000494672 ALG1Q9BT22 464 aa6.79□□□□□ -1.32
CCDC66-222ENST00000494672 SPATA9Q9BWV2 254 aa6.79□□□□□ -1.32
CCDC66-222ENST00000494672 BARX1Q9HBU1 254 aaPredicted RBP6.79□□□□□ -1.32
CCDC66-222ENST00000494672 DLL4Q9NR61 685 aa6.79□□□□□ -1.32
CCDC66-222ENST00000494672 DSEQ9UL01 958 aa6.79□□□□□ -1.32
CCDC66-222ENST00000494672 WASF3Q9UPY6 502 aa6.79□□□□□ -1.32
CCDC66-222ENST00000494672 ZDHHC9Q9Y397 364 aa6.79□□□□□ -1.32
CCDC66-222ENST00000494672 BLACEA4D250 179 aa6.78□□□□□ -1.32
CCDC66-222ENST00000494672 PDPK1O15530 556 aa6.78□□□□□ -1.32
CCDC66-222ENST00000494672 FBXO21O94952 628 aa6.78□□□□□ -1.32
CCDC66-222ENST00000494672 FAHP16930 419 aa6.78□□□□□ -1.32
CCDC66-222ENST00000494672 PUM1Q14671 1186 aaKnown RBP eCLIP6.78□□□□□ -1.32
CCDC66-222ENST00000494672 PAN2Q504Q3 1202 aaKnown RBP6.78□□□□□ -1.32
CCDC66-222ENST00000494672 ZCCHC14Q8WYQ9 949 aaKnown RBP6.78□□□□□ -1.32
CCDC66-222ENST00000494672 IPO9Q96P70 1041 aaKnown RBP6.78□□□□□ -1.32
CCDC66-222ENST00000494672 KRTAP4-5Q9BYR2 181 aa6.78□□□□□ -1.32
CCDC66-222ENST00000494672 PDGFDQ9GZP0 370 aaPredicted RBP6.78□□□□□ -1.32
CCDC66-222ENST00000494672 RBPJLQ9UBG7 517 aa6.78□□□□□ -1.32
CCDC66-222ENST00000494672 NKRFO15226 690 aaKnown RBP eCLIP6.77□□□□□ -1.33
CCDC66-222ENST00000494672 ENO2P09104 434 aaPredicted RBP6.77□□□□□ -1.33
CCDC66-222ENST00000494672 PPP2CBP62714 309 aa6.77□□□□□ -1.33
CCDC66-222ENST00000494672 PPP2CAP67775 309 aa6.77□□□□□ -1.33
CCDC66-222ENST00000494672 NFATC3Q12968 1075 aa6.77□□□□□ -1.33
CCDC66-222ENST00000494672 NAALADL2Q58DX5 795 aa6.77□□□□□ -1.33
CCDC66-222ENST00000494672 YOD1Q5VVQ6 348 aaPredicted RBP6.77□□□□□ -1.33
CCDC66-222ENST00000494672 CPZQ66K79 652 aa6.77□□□□□ -1.33
CCDC66-222ENST00000494672 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms