RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 LAMB3Q13751 1172 aa11.11□□□□□ -0.63
LINC00488-201ENST00000494582 GALNTL6Q49A17 601 aa11.11□□□□□ -0.63
LINC00488-201ENST00000494582 DNAAF5Q86Y56 855 aa11.11□□□□□ -0.63
LINC00488-201ENST00000494582 IFNL3Q8IZI9 196 aa11.11□□□□□ -0.63
LINC00488-201ENST00000494582 STAG2Q8N3U4 1231 aa11.11□□□□□ -0.63
LINC00488-201ENST00000494582 PLBD2Q8NHP8 589 aa11.11□□□□□ -0.63
LINC00488-201ENST00000494582 CENPTQ96BT3 561 aa11.11□□□□□ -0.63
LINC00488-201ENST00000494582 LRRC45Q96CN5 670 aa11.11□□□□□ -0.63
LINC00488-201ENST00000494582 MMRN2Q9H8L6 949 aa11.11□□□□□ -0.63
LINC00488-201ENST00000494582 G3BP2Q9UN86 482 aaKnown RBP11.11□□□□□ -0.63
LINC00488-201ENST00000494582 CD2APQ9Y5K6 639 aa11.11□□□□□ -0.63
LINC00488-201ENST00000494582 SMIM24O75264 130 aa11.1□□□□□ -0.63
LINC00488-201ENST00000494582 LGR5O75473 907 aa11.1□□□□□ -0.63
LINC00488-201ENST00000494582 RNF8O76064 485 aa11.1□□□□□ -0.63
LINC00488-201ENST00000494582 RHOBTB3O94955 611 aa11.1□□□□□ -0.63
LINC00488-201ENST00000494582 CCNG1P51959 295 aa11.1□□□□□ -0.63
LINC00488-201ENST00000494582 IFI35P80217 286 aaPredicted RBP11.1□□□□□ -0.63
LINC00488-201ENST00000494582 ROR2Q01974 943 aaKnown RBP11.1□□□□□ -0.63
LINC00488-201ENST00000494582 DHX9Q08211 1270 aaKnown RBP11.1□□□□□ -0.63
LINC00488-201ENST00000494582 USP4Q13107 963 aa11.1□□□□□ -0.63
LINC00488-201ENST00000494582 ADAM9Q13443 819 aa11.1□□□□□ -0.63
LINC00488-201ENST00000494582 CUL1Q13616 776 aa11.1□□□□□ -0.63
LINC00488-201ENST00000494582 PDCD2Q16342 344 aaPredicted RBP11.1□□□□□ -0.63
LINC00488-201ENST00000494582 AKNAD1Q5T1N1 836 aa11.1□□□□□ -0.63
LINC00488-201ENST00000494582 PIK3AP1Q6ZUJ8 805 aa11.1□□□□□ -0.63
LINC00488-201ENST00000494582 RNF10Q8N5U6 811 aaKnown RBP11.1□□□□□ -0.63
LINC00488-201ENST00000494582 C4orf32Q8N8J7 132 aa11.1□□□□□ -0.63
LINC00488-201ENST00000494582 ANKS4BQ8N8V4 417 aa11.1□□□□□ -0.63
LINC00488-201ENST00000494582 CNBD1Q8NA66 436 aa11.1□□□□□ -0.63
LINC00488-201ENST00000494582 SLC17A8Q8NDX2 589 aa11.1□□□□□ -0.63
LINC00488-201ENST00000494582 PHC3Q8NDX5 983 aa11.1□□□□□ -0.63
LINC00488-201ENST00000494582 SCFD2Q8WU76 684 aa11.1□□□□□ -0.63
LINC00488-201ENST00000494582 P2RX5Q93086 422 aa11.1□□□□□ -0.63
LINC00488-201ENST00000494582 FAM210AQ96ND0 272 aa11.1□□□□□ -0.63
LINC00488-201ENST00000494582 PRMT1Q99873 361 aaKnown RBP11.1□□□□□ -0.63
LINC00488-201ENST00000494582 SWAP70Q9UH65 585 aa11.1□□□□□ -0.63
LINC00488-201ENST00000494582 CHD4Q14839 1912 aa11.1□□□□□ -0.63
LINC00488-201ENST00000494582 SLIT3O75094 1523 aa11.1□□□□□ -0.63
LINC00488-201ENST00000494582 PCCAP05165 728 aaPredicted RBP11.1□□□□□ -0.63
LINC00488-201ENST00000494582 PYGBP11216 843 aa11.1□□□□□ -0.63
LINC00488-201ENST00000494582 ATP2A2P16615 1042 aaKnown RBP11.1□□□□□ -0.63
LINC00488-201ENST00000494582 TATP17735 454 aaPredicted RBP11.1□□□□□ -0.63
LINC00488-201ENST00000494582 TNNC1P63316 161 aa11.1□□□□□ -0.63
LINC00488-201ENST00000494582 PLS1Q14651 629 aa11.1□□□□□ -0.63
LINC00488-201ENST00000494582 SELENOSQ9BQE4 189 aa11.1□□□□□ -0.63
LINC00488-201ENST00000494582 RNF26Q9BY78 433 aaPredicted RBP11.1□□□□□ -0.63
LINC00488-201ENST00000494582 CELF4Q9BZC1 486 aaKnown RBP11.1□□□□□ -0.63
LINC00488-201ENST00000494582 DISC1Q9NRI5 854 aa11.1□□□□□ -0.63
LINC00488-201ENST00000494582 C2CD2Q9Y426 696 aa11.1□□□□□ -0.63
LINC00488-201ENST00000494582 ABCC12Q96J65 1359 aa11.1□□□□□ -0.63
LINC00488-201ENST00000494582 GPR75-ASB3A0A0A6YYF3 556 aa11.09□□□□□ -0.63
LINC00488-201ENST00000494582 NBPF26B4DH59 902 aa11.09□□□□□ -0.63
LINC00488-201ENST00000494582 STXBP3O00186 592 aa11.09□□□□□ -0.63
LINC00488-201ENST00000494582 KCNK3O14649 394 aa11.09□□□□□ -0.63
LINC00488-201ENST00000494582 PDHA1P08559 390 aa11.09□□□□□ -0.63
LINC00488-201ENST00000494582 ZBTB48P10074 688 aaPredicted RBP11.09□□□□□ -0.63
LINC00488-201ENST00000494582 CCNE1P24864 410 aa11.09□□□□□ -0.63
LINC00488-201ENST00000494582 GCLCP48506 637 aaPredicted RBP11.09□□□□□ -0.63
LINC00488-201ENST00000494582 IFNAR2P48551 515 aa11.09□□□□□ -0.63
LINC00488-201ENST00000494582 NAB2Q15742 525 aa11.09□□□□□ -0.63
LINC00488-201ENST00000494582 NUGGCQ68CJ6 796 aa11.09□□□□□ -0.63
LINC00488-201ENST00000494582 PDXDC1Q6P996 788 aa11.09□□□□□ -0.63
LINC00488-201ENST00000494582 GALNT15Q8N3T1 639 aa11.09□□□□□ -0.63
LINC00488-201ENST00000494582 NBPF15Q8N660 670 aa11.09□□□□□ -0.63
LINC00488-201ENST00000494582 B4GALNT2Q8NHY0 566 aa11.09□□□□□ -0.63
LINC00488-201ENST00000494582 TEKT4Q8WW24 435 aa11.09□□□□□ -0.63
LINC00488-201ENST00000494582 CNKSR2Q8WXI2 1034 aa11.09□□□□□ -0.63
LINC00488-201ENST00000494582 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.09□□□□□ -0.63
LINC00488-201ENST00000494582 SEMA6BQ9H3T3 888 aa11.09□□□□□ -0.63
LINC00488-201ENST00000494582 ARMT1Q9H993 441 aa11.09□□□□□ -0.63
LINC00488-201ENST00000494582 SLC52A2Q9HAB3 445 aa11.09□□□□□ -0.63
LINC00488-201ENST00000494582 AMACRQ9UHK6 382 aa11.09□□□□□ -0.63
LINC00488-201ENST00000494582 ASB3Q9Y575 518 aa11.09□□□□□ -0.63
LINC00488-201ENST00000494582 ADAMTS7Q9UKP4 1686 aa11.09□□□□□ -0.63
LINC00488-201ENST00000494582 BMP15O95972 392 aa11.09□□□□□ -0.63
LINC00488-201ENST00000494582 OAS1P00973 400 aaKnown RBP11.09□□□□□ -0.63
LINC00488-201ENST00000494582 MSH2P43246 934 aa11.09□□□□□ -0.63
LINC00488-201ENST00000494582 MMP13P45452 471 aa11.09□□□□□ -0.63
LINC00488-201ENST00000494582 MTHFD1LQ6UB35 978 aa11.09□□□□□ -0.63
LINC00488-201ENST00000494582 MFSD6Q6ZSS7 791 aa11.09□□□□□ -0.63
LINC00488-201ENST00000494582 EIF1ADQ8N9N8 165 aaKnown RBP11.09□□□□□ -0.63
LINC00488-201ENST00000494582 UTP4Q969X6 686 aaKnown RBP11.09□□□□□ -0.63
LINC00488-201ENST00000494582 NAPBQ9H115 298 aa11.09□□□□□ -0.63
LINC00488-201ENST00000494582 DPH5Q9H2P9 285 aa11.09□□□□□ -0.63
LINC00488-201ENST00000494582 CNOT10Q9H9A5 744 aaKnown RBP11.09□□□□□ -0.63
LINC00488-201ENST00000494582 ARHGEF3Q9NR81 526 aa11.09□□□□□ -0.63
LINC00488-201ENST00000494582 CWC25Q9NXE8 425 aaPredicted RBP11.09□□□□□ -0.63
LINC00488-201ENST00000494582 A0A0G2JS52 829 aa11.08□□□□□ -0.64
LINC00488-201ENST00000494582 GSG1L2A8MUP6 293 aa11.08□□□□□ -0.64
LINC00488-201ENST00000494582 RBAK-RBAKDNI3L0D1 243 aa11.08□□□□□ -0.64
LINC00488-201ENST00000494582 TTI1O43156 1089 aa11.08□□□□□ -0.64
LINC00488-201ENST00000494582 MBD4O95243 580 aa11.08□□□□□ -0.64
LINC00488-201ENST00000494582 VIMP08670 466 aaKnown RBP11.08□□□□□ -0.64
LINC00488-201ENST00000494582 GNAZP19086 355 aa11.08□□□□□ -0.64
LINC00488-201ENST00000494582 RNASELQ05823 741 aaKnown RBP11.08□□□□□ -0.64
LINC00488-201ENST00000494582 BNIP1Q12981 228 aa11.08□□□□□ -0.64
LINC00488-201ENST00000494582 ALX1Q15699 326 aa11.08□□□□□ -0.64
LINC00488-201ENST00000494582 IFI16Q16666 785 aaKnown RBP11.08□□□□□ -0.64
LINC00488-201ENST00000494582 VWA3BQ502W6 1294 aa11.08□□□□□ -0.64
LINC00488-201ENST00000494582 ASRGL1Q7L266 308 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms