RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 CHCHD6Q9BRQ6 235 aa7.88□□□□□ -1.15
SNX13-210ENST00000494402 B3GNT5Q9BYG0 378 aa7.88□□□□□ -1.15
SNX13-210ENST00000494402 BRD9Q9H8M2 597 aa7.88□□□□□ -1.15
SNX13-210ENST00000494402 PRDM6Q9NQX0 595 aa7.88□□□□□ -1.15
SNX13-210ENST00000494402 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.88□□□□□ -1.15
SNX13-210ENST00000494402 MAGED2Q9UNF1 606 aaPredicted RBP7.88□□□□□ -1.15
SNX13-210ENST00000494402 SNX5Q9Y5X3 404 aa7.88□□□□□ -1.15
SNX13-210ENST00000494402 CLSPNQ9HAW4 1339 aa7.87□□□□□ -1.15
SNX13-210ENST00000494402 RHPN2P1A8MT19 583 aa7.87□□□□□ -1.15
SNX13-210ENST00000494402 RGS13O14921 159 aa7.87□□□□□ -1.15
SNX13-210ENST00000494402 B3GALT2O43825 422 aa7.87□□□□□ -1.15
SNX13-210ENST00000494402 CLEC3AO75596 197 aa7.87□□□□□ -1.15
SNX13-210ENST00000494402 SLITRK5O94991 958 aa7.87□□□□□ -1.15
SNX13-210ENST00000494402 INMTO95050 263 aa7.87□□□□□ -1.15
SNX13-210ENST00000494402 XPAP23025 273 aaPredicted RBP7.87□□□□□ -1.15
SNX13-210ENST00000494402 GRK2P25098 689 aa7.87□□□□□ -1.15
SNX13-210ENST00000494402 HOXC12P31275 282 aa7.87□□□□□ -1.15
SNX13-210ENST00000494402 CASP5P51878 434 aa7.87□□□□□ -1.15
SNX13-210ENST00000494402 MAPK10P53779 464 aa7.87□□□□□ -1.15
SNX13-210ENST00000494402 CACNB2Q08289 660 aaPredicted RBP7.87□□□□□ -1.15
SNX13-210ENST00000494402 NEXNQ0ZGT2 675 aa7.87□□□□□ -1.15
SNX13-210ENST00000494402 POU4F2Q12837 409 aa7.87□□□□□ -1.15
SNX13-210ENST00000494402 SF1Q15637 639 aaKnown RBP7.87□□□□□ -1.15
SNX13-210ENST00000494402 CCDC30Q5VVM6 783 aa7.87□□□□□ -1.15
SNX13-210ENST00000494402 HIBCHQ6NVY1 386 aaPredicted RBP7.87□□□□□ -1.15
SNX13-210ENST00000494402 TTLL7Q6ZT98 887 aa7.87□□□□□ -1.15
SNX13-210ENST00000494402 NEK10Q6ZWH5 1172 aa7.87□□□□□ -1.15
SNX13-210ENST00000494402 EFHBQ8N7U6 833 aa7.87□□□□□ -1.15
SNX13-210ENST00000494402 ZNF713Q8N859 430 aaPredicted RBP7.87□□□□□ -1.15
SNX13-210ENST00000494402 FAM13CQ8NE31 585 aa7.87□□□□□ -1.15
SNX13-210ENST00000494402 ZSCAN18Q8TBC5 510 aaPredicted RBP7.87□□□□□ -1.15
SNX13-210ENST00000494402 LMBR1Q8WVP7 490 aa7.87□□□□□ -1.15
SNX13-210ENST00000494402 CENPIQ92674 756 aaPredicted RBP7.87□□□□□ -1.15
SNX13-210ENST00000494402 ITPKCQ96DU7 683 aa7.87□□□□□ -1.15
SNX13-210ENST00000494402 MVB12AQ96EY5 273 aa7.87□□□□□ -1.15
SNX13-210ENST00000494402 VMP1Q96GC9 406 aa7.87□□□□□ -1.15
SNX13-210ENST00000494402 TMEM120AQ9BXJ8 343 aa7.87□□□□□ -1.15
SNX13-210ENST00000494402 CRISPLD1Q9H336 500 aa7.87□□□□□ -1.15
SNX13-210ENST00000494402 WASH6PQ9NQA3 447 aa7.87□□□□□ -1.15
SNX13-210ENST00000494402 ITM2CQ9NQX7 267 aa7.87□□□□□ -1.15
SNX13-210ENST00000494402 STARD7Q9NQZ5 370 aa7.87□□□□□ -1.15
SNX13-210ENST00000494402 CCM2LQ9NUG4 571 aaPredicted RBP7.87□□□□□ -1.15
SNX13-210ENST00000494402 TOR4AQ9NXH8 423 aa7.87□□□□□ -1.15
SNX13-210ENST00000494402 NSMCE4AQ9NXX6 385 aa7.87□□□□□ -1.15
SNX13-210ENST00000494402 ABCF2Q9UG63 623 aa7.87□□□□□ -1.15
SNX13-210ENST00000494402 PCDHA8Q9Y5H6 950 aa7.87□□□□□ -1.15
SNX13-210ENST00000494402 GOLGA6L6A8MZA4 724 aa7.86□□□□□ -1.15
SNX13-210ENST00000494402 IRAK2O43187 625 aa7.86□□□□□ -1.15
SNX13-210ENST00000494402 UBXN7O94888 489 aa7.86□□□□□ -1.15
SNX13-210ENST00000494402 ZIC2O95409 532 aaPredicted RBP7.86□□□□□ -1.15
SNX13-210ENST00000494402 SNRPB2P08579 225 aaKnown RBP7.86□□□□□ -1.15
SNX13-210ENST00000494402 RAC2P15153 192 aa7.86□□□□□ -1.15
SNX13-210ENST00000494402 PTPRAP18433 802 aa7.86□□□□□ -1.15
SNX13-210ENST00000494402 MMP14P50281 582 aa7.86□□□□□ -1.15
SNX13-210ENST00000494402 ATXN1P54253 815 aaKnown RBP7.86□□□□□ -1.15
SNX13-210ENST00000494402 PRR20EP86478 221 aa7.86□□□□□ -1.15
SNX13-210ENST00000494402 PRR20CP86479 221 aa7.86□□□□□ -1.15
SNX13-210ENST00000494402 PRR20DP86480 221 aa7.86□□□□□ -1.15
SNX13-210ENST00000494402 PRR20BP86481 221 aa7.86□□□□□ -1.15
SNX13-210ENST00000494402 PRR20AP86496 221 aa7.86□□□□□ -1.15
SNX13-210ENST00000494402 ATP11AP98196 1134 aa7.86□□□□□ -1.15
SNX13-210ENST00000494402 PRKG1Q13976 671 aa7.86□□□□□ -1.15
SNX13-210ENST00000494402 HSF5Q4G112 596 aaPredicted RBP7.86□□□□□ -1.15
SNX13-210ENST00000494402 TMEM177Q53S58 311 aa7.86□□□□□ -1.15
SNX13-210ENST00000494402 FAM209BQ5JX69 171 aa7.86□□□□□ -1.15
SNX13-210ENST00000494402 MFSD4BQ5TF39 518 aa7.86□□□□□ -1.15
SNX13-210ENST00000494402 DCAF15Q66K64 600 aa7.86□□□□□ -1.15
SNX13-210ENST00000494402 GTF2IRD2BQ6EKJ0 949 aa7.86□□□□□ -1.15
SNX13-210ENST00000494402 CYFIP1Q7L576 1253 aa7.86□□□□□ -1.15
SNX13-210ENST00000494402 DHX32Q7L7V1 743 aaKnown RBP7.86□□□□□ -1.15
SNX13-210ENST00000494402 GTF2IRD2Q86UP8 949 aa7.86□□□□□ -1.15
SNX13-210ENST00000494402 ESX1Q8N693 406 aa7.86□□□□□ -1.15
SNX13-210ENST00000494402 ZNF527Q8NB42 609 aa7.86□□□□□ -1.15
SNX13-210ENST00000494402 TMEM145Q8NBT3 493 aa7.86□□□□□ -1.15
SNX13-210ENST00000494402 LRTOMTQ8WZ04 291 aa7.86□□□□□ -1.15
SNX13-210ENST00000494402 TMEM41AQ96HV5 264 aa7.86□□□□□ -1.15
SNX13-210ENST00000494402 POP1Q99575 1024 aaKnown RBP7.86□□□□□ -1.15
SNX13-210ENST00000494402 CELF4Q9BZC1 486 aaKnown RBP7.86□□□□□ -1.15
SNX13-210ENST00000494402 ZCCHC17Q9NP64 241 aaKnown RBP7.86□□□□□ -1.15
SNX13-210ENST00000494402 MRGBPQ9NV56 204 aa7.86□□□□□ -1.15
SNX13-210ENST00000494402 SLC13A4Q9UKG4 626 aa7.86□□□□□ -1.15
SNX13-210ENST00000494402 TMCC3Q9ULS5 477 aa7.86□□□□□ -1.15
SNX13-210ENST00000494402 FSD2A1L4K1 749 aa7.85□□□□□ -1.15
SNX13-210ENST00000494402 PTPDC1A2A3K4 754 aa7.85□□□□□ -1.15
SNX13-210ENST00000494402 CAPN8A6NHC0 703 aa7.85□□□□□ -1.15
SNX13-210ENST00000494402 J3QL48 77 aa7.85□□□□□ -1.15
SNX13-210ENST00000494402 ARVCFO00192 962 aa7.85□□□□□ -1.15
SNX13-210ENST00000494402 KPNA5O15131 536 aa7.85□□□□□ -1.15
SNX13-210ENST00000494402 SMNDC1O75940 238 aaKnown RBP eCLIP7.85□□□□□ -1.15
SNX13-210ENST00000494402 KCNH1O95259 989 aa7.85□□□□□ -1.15
SNX13-210ENST00000494402 GRK4P32298 578 aa7.85□□□□□ -1.15
SNX13-210ENST00000494402 MECP2P51608 486 aaKnown RBP7.85□□□□□ -1.15
SNX13-210ENST00000494402 SNX16P57768 344 aa7.85□□□□□ -1.15
SNX13-210ENST00000494402 HNRNPUQ00839 825 aaKnown RBP eCLIP7.85□□□□□ -1.15
SNX13-210ENST00000494402 STARD3Q14849 445 aa7.85□□□□□ -1.15
SNX13-210ENST00000494402 ANKRD39Q53RE8 183 aa7.85□□□□□ -1.15
SNX13-210ENST00000494402 SLC10A5Q5PT55 438 aa7.85□□□□□ -1.15
SNX13-210ENST00000494402 SLC35F1Q5T1Q4 408 aa7.85□□□□□ -1.15
SNX13-210ENST00000494402 NPNTQ6UXI9 565 aa7.85□□□□□ -1.15
SNX13-210ENST00000494402 TRIM67Q6ZTA4 783 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms