RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 C16orf87Q6PH81 154 aa7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 ILDR2Q71H61 639 aa7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 ARMC9Q7Z3E5 817 aa7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 KRT26Q7Z3Y9 468 aa7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 SPICE1Q8N0Z3 855 aa7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 SYMPKQ92797 1274 aaKnown RBP7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 FAM20AQ96MK3 541 aa7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 TINF2Q9BSI4 451 aa7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 HOXC10Q9NYD6 342 aa7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 ASTN2O75129 1339 aaPredicted RBP7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 SMTNL1A8MU46 457 aa7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 USP17L15C9J2P7 530 aa7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 USP17L13C9JLJ4 530 aa7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 USP17L11C9JVI0 530 aa7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 USP17L18D6R9N7 530 aa7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 USP17L22D6RA61 530 aa7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 USP17L17D6RBQ6 530 aa7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 USP17L19D6RCP7 530 aa7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 USP17L20D6RJB6 530 aa7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 CXCL11O14625 94 aa7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 MEIS2O14770 477 aa7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 ATP2A1O14983 1001 aa7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 USP2O75604 605 aaPredicted RBP7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 DNAJA1P31689 397 aaKnown RBP7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 FLT3P36888 993 aa7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 USP17L24Q0WX57 530 aa7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 SPP2Q13103 211 aa7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 TTLL12Q14166 644 aaPredicted RBP7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 POSTNQ15063 836 aa7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 LDHDQ86WU2 507 aa7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 CKAP2LQ8IYA6 745 aa7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 CCDC47Q96A33 483 aaKnown RBP7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 CALML4Q96GE6 196 aa7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 MTMR9Q96QG7 549 aa7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 NELL2Q99435 816 aa7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 SLC38A10Q9HBR0 1119 aa7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 RMND1Q9NWS8 449 aa7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 DDX25Q9UHL0 483 aaKnown RBP7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 AFG3L2Q9Y4W6 797 aa7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 PHIPQ8WWQ0 1821 aa7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 KDM3AQ9Y4C1 1321 aa7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 VCAM1P19320 739 aa7.49□□□□□ -1.21
FNDC3B-212ENST00000494000 PPP1R2P41236 205 aa7.49□□□□□ -1.21
FNDC3B-212ENST00000494000 FKBP1BP68106 108 aa7.49□□□□□ -1.21
FNDC3B-212ENST00000494000 PABPC4Q13310 644 aaKnown RBP eCLIP7.49□□□□□ -1.21
FNDC3B-212ENST00000494000 MTMR2Q13614 643 aa7.49□□□□□ -1.21
FNDC3B-212ENST00000494000 COG2Q14746 738 aa7.49□□□□□ -1.21
FNDC3B-212ENST00000494000 XRRA1Q6P2D8 792 aa7.49□□□□□ -1.21
FNDC3B-212ENST00000494000 ERO1BQ86YB8 467 aa7.49□□□□□ -1.21
FNDC3B-212ENST00000494000 MB21D1Q8N884 522 aa7.49□□□□□ -1.21
FNDC3B-212ENST00000494000 IGSF22Q8N9C0 903 aa7.49□□□□□ -1.21
FNDC3B-212ENST00000494000 SMARCE1Q969G3 411 aa7.49□□□□□ -1.21
FNDC3B-212ENST00000494000 GSDMAQ96QA5 445 aa7.49□□□□□ -1.21
FNDC3B-212ENST00000494000 TAF1DQ9H5J8 278 aaPredicted RBP7.49□□□□□ -1.21
FNDC3B-212ENST00000494000 RPAP3Q9H6T3 665 aaPredicted RBP7.49□□□□□ -1.21
FNDC3B-212ENST00000494000 EMILIN3Q9NT22 766 aa7.49□□□□□ -1.21
FNDC3B-212ENST00000494000 STK17AQ9UEE5 414 aa7.49□□□□□ -1.21
FNDC3B-212ENST00000494000 CCPG1Q9ULG6 757 aa7.49□□□□□ -1.21
FNDC3B-212ENST00000494000 USTQ9Y2C2 406 aa7.49□□□□□ -1.21
FNDC3B-212ENST00000494000 ZHX2Q9Y6X8 837 aa7.49□□□□□ -1.21
FNDC3B-212ENST00000494000 RBBP6Q7Z6E9 1792 aaKnown RBP7.49□□□□□ -1.21
FNDC3B-212ENST00000494000 PAPPA2Q9BXP8 1791 aa7.49□□□□□ -1.21
FNDC3B-212ENST00000494000 SSC5DA1L4H1 1573 aa7.49□□□□□ -1.21
FNDC3B-212ENST00000494000 GOLGA6L19H0YKK7 550 aa7.49□□□□□ -1.21
FNDC3B-212ENST00000494000 ACTN4O43707 911 aaKnown RBP7.49□□□□□ -1.21
FNDC3B-212ENST00000494000 PPP1R37O75864 691 aa7.49□□□□□ -1.21
FNDC3B-212ENST00000494000 FLOT1O75955 427 aa7.49□□□□□ -1.21
FNDC3B-212ENST00000494000 KIF20AO95235 890 aa7.49□□□□□ -1.21
FNDC3B-212ENST00000494000 ZNF165P49910 485 aa7.49□□□□□ -1.21
FNDC3B-212ENST00000494000 ARHGAP4P98171 946 aa7.49□□□□□ -1.21
FNDC3B-212ENST00000494000 ANO6Q4KMQ2 910 aa7.49□□□□□ -1.21
FNDC3B-212ENST00000494000 KIAA1755Q5JYT7 1200 aa7.49□□□□□ -1.21
FNDC3B-212ENST00000494000 RRAGBQ5VZM2 374 aa7.49□□□□□ -1.21
FNDC3B-212ENST00000494000 NIPA1Q7RTP0 329 aa7.49□□□□□ -1.21
FNDC3B-212ENST00000494000 SH3RF1Q7Z6J0 888 aa7.49□□□□□ -1.21
FNDC3B-212ENST00000494000 MLKLQ8NB16 471 aa7.49□□□□□ -1.21
FNDC3B-212ENST00000494000 GTF3C2Q8WUA4 911 aaPredicted RBP7.49□□□□□ -1.21
FNDC3B-212ENST00000494000 CRYGNQ8WXF5 182 aa7.49□□□□□ -1.21
FNDC3B-212ENST00000494000 PPP1R9BQ96SB3 815 aa7.49□□□□□ -1.21
FNDC3B-212ENST00000494000 NT5C3AQ9H0P0 336 aa7.49□□□□□ -1.21
FNDC3B-212ENST00000494000 DISC1Q9NRI5 854 aa7.49□□□□□ -1.21
FNDC3B-212ENST00000494000 TMEM260Q9NX78 707 aa7.49□□□□□ -1.21
FNDC3B-212ENST00000494000 ADAMTS5Q9UNA0 930 aa7.49□□□□□ -1.21
FNDC3B-212ENST00000494000 BECN2A8MW95 431 aa7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 MUTP22033 750 aa7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 DSG3P32926 999 aa7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 STAT6P42226 847 aa7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 HSD17B4P51659 736 aa7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 MDM2Q00987 491 aaPredicted RBP7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 ZYXQ15942 572 aaKnown RBP7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 UBE2SQ16763 222 aa7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 USH1GQ495M9 461 aa7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 KRT79Q5XKE5 535 aa7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 CATSPERGQ6ZRH7 1159 aa7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 CABP7Q86V35 215 aa7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 ERMNQ8TAM6 284 aa7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 SPATA20Q8TB22 786 aa7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 STK32AQ8WU08 396 aa7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 CEP63Q96MT8 703 aa7.48□□□□□ -1.21
FNDC3B-212ENST00000494000 SERTAD1Q9UHV2 236 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms